GENSCAN 1.0	Date run:  6-Nov-116	Time: 05:50:26

Sequence gi568815591f:43483244_43724839 : 241596 bp : 40.87% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    949   1067  119  0  2   54   72   104 0.216   3.74
 1.02 Intr +   7078   7162   85  1  1   69   84    36 0.134   0.20
 1.03 Intr +   8832   8937  106  2  1   53   71    27 0.118  -3.63
 1.04 Intr +   9841   9937   97  2  1  114  115    88 0.188  12.25
 1.05 Intr +  17456  17539   84  2  0   68   75    87 0.855   3.42
 1.06 Intr +  17970  18079  110  0  2   81   92    95 0.914   8.21
 1.07 Intr +  21528  21656  129  1  0   95   22    65 0.417   0.35
 1.08 Intr +  23894  24014  121  0  1  117   78    80 0.835   8.53
 1.09 Intr +  24775  24888  114  1  0  124   60   170 0.998  16.44
 1.10 Intr +  25726  25878  153  1  0   99   91   154 0.888  15.07
 1.11 Intr +  29991  30184  194  0  2   37   26   119 0.084  -1.19
 1.12 Term +  30775  30887  113  2  2   86   40    93 0.177   2.04
 1.13 PlyA +  33173  33178    6                               1.05

 2.00 Prom +  34949  34988   40                              -2.45
 2.01 Init +  37988  38026   39  1  0   67   70    49 0.088   1.24
 2.02 Intr +  40117  40325  209  0  2   61   34   106 0.068  -0.55
 2.03 Intr +  48599  48754  156  2  0  113   69    99 0.111   8.70
 2.04 Intr +  57920  58018   99  2  0  109   93   108 0.930  11.71
 2.05 Intr +  58626  58755  130  0  1   49   72   150 0.915   9.28
 2.06 Intr +  67202  67348  147  1  0   45   78   175 0.738  11.71
 2.07 Intr +  68979  69093  115  2  1   58  105   218 0.999  19.60
 2.08 Intr +  71349  71547  199  1  1  108   92   156 0.857  15.49
 2.09 Term +  74803  74989  187  1  1   42   42   118 0.043  -1.42
 2.10 PlyA +  75011  75016    6                               1.05

 3.04 PlyA -  75647  75642    6                              -3.64
 3.03 Term -  76529  76360  170  0  2   43   33   205 0.034   7.56
 3.02 Intr -  86416  86325   92  0  2  125   55    54 0.037   4.52
 3.01 Init -  94708  94269  440  1  2   54   33   259 0.016  12.63
 3.00 Prom -  96550  96511   40                              -7.15

 4.00 Prom +  97008  97047   40                              -6.25
 4.01 Init + 100001 100206  206  1  2   79   94   133 0.012   9.46
 4.02 Intr + 100413 100514  102  0  0   18   86   145 0.012   5.67
 4.03 Intr + 112658 112870  213  2  0   95   92   139 0.372  11.91
 4.04 Intr + 125013 125157  145  0  1   68  116   149 0.991  15.06
 4.05 Intr + 136354 136480  127  0  1   53  106   146 0.851  12.23
 4.06 Intr + 140519 140645  127  0  1   52   80    81 0.509   2.52
 4.07 Term + 141275 141599  325  2  1   65   53   381 0.996  25.55
 4.08 PlyA + 143524 143529    6                               1.05

 5.03 PlyA - 144387 144382    6                               1.05
 5.02 Term - 152354 152105  250  1  1   45   39   198 0.774   4.79
 5.01 Init - 153854 153733  122  2  2   93  103   180 0.750  19.71
 5.00 Prom - 157008 156969   40                              -7.65

 6.00 Prom + 157495 157534   40                              -6.35
 6.01 Init + 159874 160241  368  0  2   87   44   199 0.636  12.24
 6.02 Term + 160289 160385   97  2  1  110   42    80 0.602   2.06
 6.03 PlyA + 161207 161212    6                               1.05

 7.06 PlyA - 161292 161287    6                              -0.45
 7.05 Term - 162156 161966  191  1  2   50   49   208 0.812   9.73
 7.04 Intr - 164391 164292  100  0  1   58  106    72 0.158   4.76
 7.03 Intr - 165409 165357   53  2  2   92   90    25 0.035   0.81
 7.02 Intr - 202454 202340  115  2  1   83   92    27 0.153   1.70
 7.01 Init - 212199 212080  120  0  0   53   83   118 0.705   8.04
 7.00 Prom - 218638 218599   40                              -3.45

 8.04 PlyA - 219178 219173    6                               1.05
 8.03 Term - 222038 221916  123  2  0   79   37   131 0.000   4.50
 8.02 Intr - 232884 232532  353  1  2   37   72   272 0.386  14.62
 8.01 Init - 234720 234585  136  0  1   83   25   136 0.591   7.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_1|474_aa
LCDSQSLWGLIPRLQDRITKRPINYIELRGAGKAGRKDGRMELSPPFLVLVLSEDHPILT
PFFDQLNSASEVSRNRGASLLARPGHSLVAAIRSQHQHESLPLAYNDKIVAFLRQPNIFE
MLQERQPSLARNHTLREKIHYIRTEGNHGLEKLSCDADLVILLSLFEEEIMSYVPLQAAF
HPGYSFSPRCSPCSSPQNSPANDVLFYLTEKLKPSSRNFFKGLPTRLANLYTSSLSSLEV
TKGGLQRASARAPSPYRRDFEAKLRNFYRKLEAKGFGQGPGKIKLIIRRDHLLEGTFNQV
MAYSRKELQRNKLYVTFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQI
SPMSAFVENHLECPCKVSDKCTCPLRSLHSGTLLSTTRECCLLLKEGLLLLLTLHVVLQR
PLPGKALPKDINGETPDIPMAKPNHEPEDRGSPDTATHSGQSLSHRAGQKKMGN

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_1|1425_bp
ctgtgtgattctcagagtctgtggggcttgattccacgtcttcaggaccgcataactaag
agacccattaactacatagagctaagaggagcaggaaaggcaggacggaaggatggcaga
atggagctctctcctccctttctggttctggttctgagtgaggaccaccccattctcaca
ccattctttgatcaattaaactctgcctcagaagtttctagaaacagaggagcctcttta
ctggccaggccaggacacagcttagtagctgctattcgaagccaacatcaacatgagtca
ttgccactggcatataatgacaagattgtggcatttcttcgccagccaaacatttttgaa
atgctgcaagagcgtcagccaagcttagcaagaaaccacacactcagggagaaaatccat
tacattcggactgagggtaatcacgggcttgagaagttgtcctgtgatgcggatctggtc
attttgctgagtctctttgaagaagagattatgtcctacgtccccctgcaggctgccttc
caccctgggtatagcttctctccccgatgttcaccctgttcttcacctcagaactcccca
gcaaatgacgtcctgttttacctcactgagaagttgaagccatccagcagaaacttcttc
aaaggcctgcccacaaggctagcaaacctgtacacatcttctctgtcatctctggaggtc
acgaaaggaggtttacagagagccagtgcaagagccccttccccctaccgaagagacttt
gaggccaagctccgcaatttctacagaaaactggaagccaaaggatttggtcagggtccg
gggaaaattaagctcattattcgccgggatcatttgttggagggaaccttcaatcaggtg
atggcctattcgcggaaagagctccagcgaaacaagctctacgtcacctttgttggagag
gagggcctggactacagtggcccctcgcgggagttcttcttccttctgtctcaggagctc
ttcaacccttactatggactctttgagtactcggcaaatgatacttacacggtgcagatc
agccccatgtccgcatttgtagaaaaccatcttgagtgcccttgcaaagtcagtgataaa
tgcacatgtcccttaagatctttacactctgggactctgctctccacgacgcgtgaatgc
tgcttgttactgaaggaaggcctcctccttcttctcacactgcacgtggtcctgcagcgg
ccacttccaggcaaggcactgcccaaagacatcaatggagaaacccctgacatcccaatg
gccaaacccaaccatgaaccagaggacagaggctctccagatactgcaacccacagtggc
cagtccctaagtcacagagcaggacagaaaaagatgggaaattag

>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_2|426_aa
MNGSKALIKGLERELGFVGPLEGCKAFEETMSEEREILNYKREQKVDGRRAQRRQGKTID
SPSEDISFERESAPAGELLEPGRSPNAASINIQPWVRLSICTNFLHDLVQMPGFKCHLHP
DGPTVTSVVRPCARRFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLPCDLSDLEYLDE
EFHQSLQWMKDNNITDILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMVK
WRVERGVVQQTEALVRGFYEVVDSRLVSVFDARELELVIAGTAEIDLNDWRNNTEYRGGY
HDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSVPYEGFAALRGSNGLRRFCIEKWGKI
TSLPSVWGSEQFPPMRTGDGTLGPGGSIWKELKEVAKFLYFEQELKGGQRKGSEGKRRAE
ARSESK

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_2|1281_bp
atgaatgggagtaaggcccttataaaaggccttgagagagagcttggctttgtggggccg
ctagaaggatgcaaggcctttgaggagacaatgtcagaagagagagaaatcttgaattat
aagagagagcaaaaagtggatggaagaagagcccagaggaggcagggaaagacaatagat
agcccaagtgaagacattagctttgaaagagagtcagccccagcaggagaattgcttgaa
cccgggagatccccgaatgctgcatcaattaacattcagccctgggtccgcctctccatc
tgcacaaacttcctccatgatcttgtccagatgcctggcttcaaatgccatctgcatcct
gacggccccacagtgacatctgtagtgcggccctgtgcccggaggttcaggtttagcggt
cgcatcctgggtctggctctgatccatcagtaccttcttgacgctttcttcacgaggccc
ttctacaaggcactcctgagactgccctgtgatttgagtgacctggaatatttggatgag
gaattccaccagagtttgcagtggatgaaggacaacaacatcacagacatcttagacctc
actttcactgttaatgaagaggtttttggacaggtcacggaaagggagttgaagtctgga
ggagccaacacacaggtgacggagaaaaacaagaaggagtacatcgagcgcatggtgaag
tggcgggtggagcgcggcgtggtacagcagaccgaggcgctggtgcgcggcttctacgag
gttgtagactcgaggctggtgtccgtgtttgatgccagggagctggagctggtgatagct
ggcaccgcggaaatcgacctaaatgactggcggaataacactgagtaccggggaggttac
cacgatgggcatcttgtgatccgctggttctgggctgcggtggagcgcttcaataatgag
cagaggctgagattactgcagtttgtcacgggaacatccagcgtgccctacgaaggcttc
gcagccctccgtgggagcaatgggcttcggcgcttctgcatagagaaatgggggaaaatt
acttctctccccagcgtgtggggcagtgagcaatttccacccatgagaactggagatggg
acactaggacccggaggcagcatctggaaagagcttaaggaggtggcaaagtttctttac
tttgaacaagagctcaaaggaggacagaggaaaggctcagaaggaaagagaagggcagaa
gctaggtcagagtcgaagtag

>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_3|233_aa
MLVIDEQRKWFPEMESTPVEDAVNTVEMTTNDLEYYINLVDKMVAILIPILKEVLLIEAR
GRQRPRQIGKGPRRISNSPHKCLHQMFCADKGTCTGDLPEHARSELEAHKHWGNGVEPPG
IRVLCRGGAWLRSLDKEQKNPASLLCGPALMVIAQQQEREVKLSRASTLHASACVMLGVV
LTAPSACLPHSRAPNQALPGGVGQWTARNQGLEDFYADPGLVTYQLYDTGKVN

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_3|702_bp
atgcttgttatagatgagcaaagaaagtggtttcctgagatggaatctactcctgttgaa
gatgccgtaaacactgttgaaatgacaacaaacgatttagaatattacataaacttagtt
gataaaatggtggcaattttgattccaattttgaaggaagtcctactgatagaggcaaga
ggcagacaaaggcctaggcagatagggaagggtccccggagaatctccaactcgccccac
aagtgtttacatcagatgttttgtgcagataagggaacctgcacaggggacttgcctgag
catgcccgcagtgaactggaggcccacaagcactgggggaatggggtggagccaccagga
attcgtgtcttatgcaggggaggagcctggctaaggagcctagataaggagcaaaaaaat
cctgcatcactactgtgtgggcctgctctcatggtgatagcacagcaacaagagagagag
gtcaagctcagccgtgcaagtactttacatgcctctgcttgtgttatgctgggtgtggtt
ctgacagcaccgagtgcctgcttacctcattcccgtgcaccaaaccaagcattgcccggt
ggtgtggggcagtggacagcaagaaaccagggcttggaagacttctatgctgaccccggt
ctagtcacttaccagctttatgacactggaaaagtcaattaa

>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_4|414_aa
MIPLEKPGSGGSSPGATSGSGRAGRGLSGPCRPPPPPQARGLLTEIRAVVRTEPFQDGYS
LCPGRELGSKRVVVTRWRSRRRGHFPQPFRSLWRFEWLFNERRGKFAVVRKCIKKDSGKE
FAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYETASEMILVLEYAAGGEI
FDQCVADREEAFKEKDVQRLMRQILEGVHFLHTRDVVHLDLKPQNILLTSESPLGDIKIV
DFGLSRILKNSEELREIMGTPEYVGNDKQETFLNISQMNLSYSEEEFDVLSESAVDFIRT
LLVKKPEDRATAEECLKHPWLTQSSIQEPSFRMEKALEEANALQEGHSVPEINSDTDKSE
TKESIVTEELIVVTSYTLGQCRQSEKEKMEQKAISKRFKFEEPLLQEIPGEFIY

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_4|1245_bp
atgatccctttggagaagccaggcagcggcggctcctccccaggcgccacctcaggctcg
ggccgggcaggccggggtctgagcgggccgtgccggccgccgccgccgccccaggcccgc
gggctgctgacagagatacgcgccgtggtgcgcaccgagcccttccaggacggctacagc
ctgtgcccgggccgggagctgggcagcaagcgagtggtggtaactcgatggcggtcccgg
aggcgcggacactttcctcagccctttcgttctctgtggcgtttcgaatggctatttaac
gagagaagggggaaatttgcagtggtgagaaaatgtataaagaaagattctgggaaagaa
tttgctgcaaagttcatgagaaaaagaagaaaaggccaagattgtcggatggaaataatt
catgagattgctgtacttgaactagcacaagacaatccttgggtcattaatttacatgaa
gtttatgagactgcatcagaaatgatcttagttctggaatatgctgctgggggtgaaatc
tttgaccagtgtgttgcagacagagaagaagcctttaaagaaaaagatgttcaaagactt
atgcgacagattttagaaggtgttcactttttacacactcgtgatgtagttcatcttgat
ttgaagcctcagaatattctgttgacaagtgaatctccattgggtgacattaagattgtt
gattttggcctttcaagaatattgaagaacagtgaagagctccgagaaattatgggtacc
cctgaatatgtgggcaatgataaacaagaaacattcttaaacatctcacagatgaattta
agttattctgaggaagaatttgatgttttgtctgagtcggctgttgatttcatcaggaca
cttttagttaagaaacctgaagatcgagccactgctgaagaatgtctaaagcacccctgg
ttgacacagagcagtattcaagagccttctttcaggatggaaaaggcactagaagaagca
aatgccctccaagaaggtcattctgtgcctgaaattaattcggataccgacaaatcagaa
accaaggaatccattgtaaccgaagagttaattgtagttacttcatatactctaggacaa
tgcagacagtctgaaaaagagaaaatggagcaaaaggccatttccaaacgatttaaattt
gaggaacctttgctacaagaaattccaggagaatttatctactga

>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_5|123_aa
MMESTTCKWKAQHEERPQSGQMGAVLQKSEAQFGQRVDERRCDCVACEWKWHAGLLSKSF
KCQPLVHAVHFAFVPKIGNVPDGGYFKGLGARTADPQWDTEHKGDINPYKPLRWGAICYP
SLT

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_5|372_bp
atgatggagagcacaacatgcaagtggaaagcacaacatgaagaaaggccccagagcggg
cagatgggagctgtgctccagaaatcagaagcccagtttggacagcgtgtagatgagcgc
aggtgtgactgtgtggcttgtgagtggaagtggcatgcaggacttctgagtaaaagtttt
aagtgccagcccttggttcatgctgtccactttgccttcgtccctaagattggtaatgtt
ccagatggtggctacttcaagggcttgggggctcggacagctgacccacagtgggacacg
gagcataagggagacataaacccttacaagcccctaagatggggggctatttgttacccc
agcttaacctag

>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_6|154_aa
MAKAPGMWGSPGRRPLSTTGAKVKAGQDKAPTKTTMALPYSHWGSWSTRSWMLHQPAPAK
APLAHNSSVLQLGSVLRETQQPDLPSGFSKFSGLLGSSQVTKGKEATDRLRHTMGAIRWP
GTEMSSLTQCRCRPSTHVHAGHWTITSDPPAPDT

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_6|465_bp
atggccaaggccccagggatgtggggaagcccaggaaggcgccctctcagcaccactggg
gccaaagtgaaagctggacaggacaaagctcccaccaaaaccaccatggccttaccctac
tctcactggggttcctggagcaccagatcatggatgctgcatcaaccagccccagcaaag
gcgcctttggcacacaattcctcagtgctacagctgggctctgtgctgagagaaacgcaa
cagccagacctacccagtggcttttccaagttctcaggattgctggggtctagccaagtg
accaaaggcaaggaagcaacagacaggctccgccacaccatgggagcaatccggtggcct
ggcacagagatgtcctctctcacgcagtgtcgctgccgtccttccactcacgtccatgct
ggacactggaccatcacctctgacccacccgctcctgatacatga

>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_7|192_aa
MWITGGRRFLAERIPNKTLMSDMLIELQGDQCDWIRGSKEDSDSDRFNTGEGLHSLILQL
SQFYSSLSKSFEISRRISRQLAFDDFQESCAMMWQKYAGSRRSMPLGARILFHGVFYAGG
FAIVYYLIQKFHSRALYYKLAVEQLQSHPEAQEALGPPLNIHYLKLIDRENFVDIVDAKV
MCFPCEPQAGAC

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_7|579_bp
atgtggataactggaggaagaagattcctggcagagagaataccaaataagaccctcatg
tctgacatgctcatagaactgcaaggagatcagtgtgactggattagagggagtaaggag
gactctgattctgacagatttaacactggagagggtcttcatagcctgattctccagctc
tctcaattctactctagtctttccaaatcatttgaaatcagcagaagaattagcagacaa
cttgcctttgatgattttcaagagagttgtgctatgatgtggcaaaagtatgcaggaagc
aggcggtcaatgcctctgggagcaaggatccttttccacggtgtgttctatgccgggggc
tttgccattgtgtattacctcattcaaaagtttcattccagggctttatattacaagttg
gcagtggagcagctgcagagccatcccgaggcacaggaagctctgggccctcctctcaac
atccattatctcaagctcatcgacagggaaaacttcgtggacattgttgatgccaaggta
atgtgctttccctgcgaaccgcaggctggtgcctgctga

>gi568815591f:43483244_43724839|GENSCAN_predicted_peptide_8|203_aa
MVEGKEEQVLSYIDGSRQRENEKDAKWKPLIKPSDLVRLIHYHKKIRFHAVDKDIPETGQ
FTKERGLIGLTVPCGWGSLTIMAEGKEEQVLSYMDGSRQRENEEDAKAETPDKTIRSLEA
IHYRKTAPMIRLSPTGSLPQHVGIMGVRFRMRFEWGHRAKSYQACMCVGAYCCPTRVLLL
AAAIGVLLPVDREHLSSFRAVGT

>gi568815591f:43483244_43724839|GENSCAN_predicted_CDS_8|612_bp
atggtggaaggcaaagaggagcaagtcctgtcttacatagatggcagcaggcaaagagag
aatgagaaagatgcaaagtggaaacccttgataaaaccatcagatcttgtgagacttatt
cactaccacaagaaaatccgttttcatgctgttgataaagacatacctgagactgggcaa
tttacaaaagaaagaggtttaattggacttacagttccatgtggctggggaagcctcaca
atcatggcagaaggcaaggaggagcaagtcctatcttacatggatggcagcaggcaaaga
gagaatgaggaggatgcaaaagcggaaacccctgataaaaccatcagatctcttgaggct
attcactatcggaaaactgcccccatgattcgattatctcccactgggtccctcccacaa
cacgtgggaattatgggagtacgattcaggatgagatttgagtggggacacagagccaag
tcatatcaggcatgcatgtgcgtgggagcctattgctgccccaccagagttcttttgctg
gcagctgccatcggagtgttgttgccagtggaccgggaacatctcagctccttcagagca
gtaggtacttaa