GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:26:16

Sequence gi568815590r:81421683_81622226 : 200544 bp : 37.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   6532   7446  915  0  0   42   43   667 0.998  53.66
 1.02 PlyA +   7674   7679    6                               1.05

 2.00 Prom +   7843   7882   40                              -6.15
 2.01 Init +   7936   8973 1038  0  0   44   41   511 0.894  36.03
 2.02 Term +   9261  10127  867  2  0  -14   38   392 0.557  15.68
 2.03 PlyA +  10303  10308    6                               1.05

 3.12 PlyA -  11100  11095    6                               1.05
 3.11 Term -  17006  16605  402  2  0   40   36   163 0.210   0.47
 3.10 Intr -  22919  22818  102  2  0   70   95    75 0.876   5.85
 3.09 Intr -  23307  23135  173  1  2   95   84    84 0.979   7.44
 3.08 Intr -  25731  25632  100  0  1   52   86    66 0.137   1.56
 3.07 Intr -  36751  36707   45  1  0   99   70    31 0.147   0.09
 3.06 Intr -  37021  36920  102  1  0   73  103    50 0.940   4.45
 3.05 Intr -  37655  37483  173  0  2   71   77   162 0.458  12.14
 3.04 Intr -  47881  47824   58  1  1  105   68    -1 0.003  -2.86
 3.03 Intr -  57833  57732  102  2  0   89   89    90 0.976   8.65
 3.02 Intr -  58916  58744  173  0  2   75  100   144 0.917  13.04
 3.01 Init -  61485  61413   73  0  1   46   82    64 0.522   2.88
 3.00 Prom -  72542  72503   40                              -5.05

 4.08 PlyA -  72859  72854    6                               1.05
 4.07 Term - 100669  99998  672  1  0   32   41   575 0.494  39.96
 4.06 Intr - 105439 105338  102  1  0   95   89    97 0.960   9.95
 4.05 Intr - 107928 107756  173  1  2   84  100   116 0.966  11.14
 4.04 Intr - 118061 117936  126  0  0  122   61    81 0.128   8.53
 4.03 Intr - 141142 140960  183  2  0   78   79    77 0.032   4.64
 4.02 Intr - 147834 147731  104  2  2   77   34    52 0.045  -2.40
 4.01 Init - 149058 148910  149  0  2   59   65   222 0.986  16.61
 4.00 Prom - 164512 164473   40                              -4.35

 5.03 PlyA - 164550 164545    6                               1.05
 5.02 Term - 183999 183899  101  1  2   96   50    50 0.554  -0.69
 5.01 Init - 185009 184889  121  2  1   31   58   146 0.679   6.30
 5.00 Prom - 192331 192292   40                              -2.45

 6.06 PlyA - 193932 193927    6                               1.05
 6.05 Term - 195741 195652   90  0  0   40   48   102 0.655  -1.86
 6.04 Intr - 196437 196275  163  2  1   -9   94   161 0.480   6.06
 6.03 Intr - 197134 197014  121  2  1   10   53   119 0.463  -0.77
 6.02 Intr - 198431 198326  106  2  1   86  100    36 0.967   3.47
 6.01 Init - 199772 199635  138  2  0   57   88   100 0.781   7.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 109633 109561   73  1  1   56   80    74 0.975   4.68


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:81421683_81622226|GENSCAN_predicted_peptide_1|304_aa
MENDFDELREEGFRRSNYSELQEDVQTKGKEVENFEKNLEECITRITNTEKCLKELMELK
TKARELREECRSLRSRCNQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVK
RPNLHLIGVPESDGENGTKLENTLQDIIQENFPNLARQAKIHIQEIQRTPQRYSSRRATP
RHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADLSAETLQARREWGPIFNILKEK
NFQPRISYPAKLSFISEGEIKYFTDKQMLRDFVTTRPALKELLKEALNMERNNRYQPLQN
HAKM

>gi568815590r:81421683_81622226|GENSCAN_predicted_CDS_1|915_bp
atggagaatgactttgacgagctgagagaagaaggcttcagacgatcaaattactctgag
ctacaggaggacgttcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaa
gaatgtataactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaag
accaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgcaatcaactg
gaagaaagggtatcagcaatggaagatgaaatgaatgaaatgaagcgagaagggaagttt
agagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaa
agaccaaatctacatctgattggtgtacctgaaagtgatggggagaatggaaccaagttg
gaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaag
attcacattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactcca
agacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagcc
agggagaaaggtcgggttaccctcaaagggaagcccatcagactaacagcggatctctcg
gcagaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaag
aattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaata
aaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaa
gagctcctgaaggaagcgctaaacatggaaaggaacaaccggtaccagccgctgcaaaat
catgccaaaatgtaa

>gi568815590r:81421683_81622226|GENSCAN_predicted_peptide_2|634_aa
MGDFNTPLSTLDRSMRQKVNKDTEELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWV
HNKMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKVSRSQEITKTRAELKEIETQKTLQKINESRSWFFERINKIDRLLAILIK
KKREKNQIDVIKNDKGDITTDPTEIETTIREYYKHLHANKLENLEEMDKFLNTYTLPRLN
QEEIESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELHINRAKDKNHMIIS
IDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTR
QGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNL
LKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKPRNPTYKGREG
PLQEELQTTAQGNKRGYKQMEEHSMLMGRKNQYRENGHTAQGNLQIQCHPHQGTNAFLHR
IGKNYLKVDMEPKRSPHRQINPKPKEQSWRHHTT

>gi568815590r:81421683_81622226|GENSCAN_predicted_CDS_2|1905_bp
atgggagactttaacaccccactgtcaacattagacagatcaatgagacagaaagtcaac
aaggataccgaggaattgaactcagctctgcaccaagcggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacaaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagttagcagaagccaagaaataactaaa
accagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagactgctagcaatactaataaag
aaaaaaagagagaagaatcaaatagacgtaataaaaaatgataagggggatatcaccacc
gatcccacagaaatagaaactaccatcagagaatactacaaacacctccacgcaaataaa
ctagaaaatctagaagaaatggataaattcctcaacacatacactctcccaagactaaac
caggaagaaattgaatctctgaatagaccaataacaggatctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaactgcatataaacagagccaaagacaaaaaccacatgattatctca
atagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaat
aaattaggtattgatgggatgtatctcaaaataataagagctatctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggtacaaga
cagggatgcccgctctcaccactcctattcaacatagtattggaagttctggccagggca
attaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc
ttgtttgcagacgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctc
cttaagctgataagcaactttagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaacctaggaatccaacttacaagggacgtgaagga
cctcttcaagaagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatg
gaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcc
caaggtaatttacagattcaatgccatccccatcaaggtaccaatgcctttcttcacaga
attggaaaaaactacttgaaagttgatatggaaccaaaaaggagcccgcatcgccaaatc
aatcctaagccaaaagaacaaagctggaggcatcacactacctga

>gi568815590r:81421683_81622226|GENSCAN_predicted_peptide_3|500_aa
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVVIII
KNLTTKIISGPLGVTGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQDTKISFKLGE
EFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKMNNIVSTRIY
EKNCVELSPITMSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDI
ITIRTESTFKNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKL
VNGKMVASTQMRGSQKNNSSNITKLVSLTLPKDHTSSPAMDSSQDEISELPEKEFRTLIL
KLIREAPEKSELQLKEIKDVIQDMKGKFCEIGSINKKQSHLLEIKDTLREMQNALETLSN
RIKQAEERSSELEDKAFELI

>gi568815590r:81421683_81622226|GENSCAN_predicted_CDS_3|1503_bp
atgtgtgatgcttttgtaggtacctggaaacttgtctccagtgaaaactttgatgattat
atgaaagaagtaggagtgggctttgccaccaggaaagtggctggcatggccaaacctaac
atgatcatcagtgtgaatggggatgtgatcaccattaaatctgaaagtacctttaaaaat
actgagatttccttcatactgggccaggaatttgacgaagtcactgcagatgacaggaaa
gtcaagagcaccataaccttagatgggggtgtcctggtacatgtgcagaaatgggatgga
aaatcaaccaccataaagagaaaacgagaggatgataaactggtggtggtcatcataata
aaaaatctcacaacaaagataatctctggacctcttggcgtcacaggagtgaatttcgca
gcccggaacatggcagggttagtgaaaccgacagtaactattagtgttgatgggaaaatg
atgaccataagaacagaaagttctttccaggacactaagatctccttcaagctgggggaa
gaatttgatgaaactacagcagacaaccggaaagtaaagagcaccataacattagagaat
ggctcaatgattcacgtccaaaaatggcttggcaaagagacaacaatcaaaagaaaaatt
gtggatgaaaaaatggtagtggaatgtaaaatgaataatattgtcagcaccagaatctac
gaaaagaactgtgttgagctctcacccatcacgatgagcaacaaattcctgggcacctgg
aaacttgtctctagtgagaactttgacgattacatgaaagctctgggtgtggggttagcc
accagaaaactgggaaatttggccaaacccactgtgatcatcagcaagaaaggagatatt
ataactatacgaactgaaagtacctttaaaaatacagaaatctccttcaagctaggccag
gaatttgaagaaaccacagctgacaatagaaagaccaagagcatcgtaaccctgcagaga
ggatcactgaatcaagtgcagagatgggatggcaaagagacaaccataaagagaaagcta
gtgaatgggaaaatggtagcgtccacccaaatgagagggagccagaaaaacaattctagt
aatataacaaaacttgtttctttaacactcccaaaagatcataccagctcaccagcaatg
gattcaagccaagatgaaatctctgaattgccagaaaaagaattcagaacgttgattctt
aagctaatcagggaggcaccagagaaaagtgaactccaacttaaagaaatcaaagacgtg
atacaagatatgaaaggaaaattctgtgaaataggtagcataaataaaaaacaatcacat
cttctggaaataaaggacacacttagagaaatgcaaaatgcactggaaactctcagcaat
agaatcaaacaagcagaagaaagaagttcagagcttgaagacaaggcttttgaattaatc
taa

>gi568815590r:81421683_81622226|GENSCAN_predicted_peptide_4|502_aa
MTGRLAAERNYPLCQELQTMGQAACRKEPPTLGPPLCGELETTGQPAAERETEDRIAKSP
APFRTLQNQSVSSRCHLLEPVLKGCPEMPSRIQGLESETLGIYVVLYSTAAKLAPKPQDE
VLLTLSLSTSRGVSSLLWPPLPQAHRIPCIILICLNHMIAQKQTAPASQHSTLRAAFSEQ
SAEILKQSIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKNNEISFKLGEEFEEITPG
GHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVPGRPPIASRPSPLHRPLRPPQ
GPPAAAPAPPLQPPLFSRRHGDPVHLAGAPGLQPGLRGRHQPPHQPGALRLLLLPVHVLY
FDRDDVALKNFAKYFLYQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAM
ECALYLEKNVNQSLLELYKLATDKNDPHLCDFIETHYLNEQVKAIKELSDHVTNLRKMGA
PESGSAEYLFDKHTLGDSDNES

>gi568815590r:81421683_81622226|GENSCAN_predicted_CDS_4|1509_bp
atgacaggacgactagctgcagagagaaactaccctctctgccaagagctgcagacgatg
ggacaagctgcctgcagaaaggagccacccactctagggcctcctctctgcggagagctg
gagacaacgggacaaccagctgcagagagagaaactgaagacagaattgctaagtcacct
gctcccttcagaactctgcagaatcagtctgtttcttctagatgccatctcttggagcca
gtgttgaaaggctgtccagagatgccatctagaatccagggcctagagtcagaaacctta
ggaatctatgtggtcctctattctactgcagctaagctggcacccaagccacaagatgaa
gttcttctcactctttccctttccacaagcaggggagtctcttctctcctgtggccacca
ctgccccaggcccacagaattccgtgtattattttgatttgtctgaatcacatgattgct
cagaagcagacagcaccagcaagccagcactcaaccctaagagcagccttcagtgagcag
tctgctgaaattctaaaacagagtataggaagagccagcaggaaactgggccgtttggca
aaacccactgtgaccatcagtacagatggagatgtcatcacaataaaaaccaaaagcatc
tttaaaaataatgagatctcctttaagctgggagaagagtttgaggaaatcacgccaggt
ggccacaaaacaaagagtaaagtaaccttagataaggagtccctgattcaagttcaggac
tgggatggcaaagaaaccaccataacgagaaagctggtggatgggaaaatggtggtgccc
ggccggccgcccatagccagccgtccgtcacctcttcaccgccccctcagaccgccccaa
ggtccccccgccgccgctccagcgccgccgctgcagccgcctctctttagtcgccgccat
ggcgaccccgtccacctcgcaggagcgccaggactacaaccaggactcagaggccgccat
caaccgccacatcaacctggagctctgcgcctcctacttttacctgtccatgtcttatac
tttgaccgcgatgatgtggctttgaagaactttgccaaatactttctttaccaatctcat
gaggagagggaacatgctgagaaactgatgaagctgcagaaccaacgaggtggccgaatc
ttccttcaggatatcaagaaaccagactgtgatgactgggagagcgggctgaatgcgatg
gagtgtgcattatatttggaaaaaaatgtgaatcagtcactactggaactgtacaaactg
gccactgacaaaaatgacccccatttgtgtgacttcattgagacacattacctgaatgag
caggtgaaagccatcaaagaattgagtgaccacgtgaccaacttgcgcaagatgggagcg
cccgaatctggctcggcagaatatctcttcgacaagcacaccctgggagacagtgataat
gaaagctaa

>gi568815590r:81421683_81622226|GENSCAN_predicted_peptide_5|73_aa
MCIAASGGAEAFYEMGIHCWDIAVAAIIVTEAGGVLMDVTGGPFHLMSRRIIAANCTALA
ERIAKEIQVAPFQ

>gi568815590r:81421683_81622226|GENSCAN_predicted_CDS_5|222_bp
atgtgcattgcggcaagtggaggagcagaggcattttatgaaatgggaattcactgctgg
gatattgcagtagctgccattattgttactgaagctggtggcgtgctaatggatgttact
ggtggaccattccatttaatgtcacggagaataattgctgcaaattgtacagcattagca
gaaaggatagccaaagaaattcaggtagcaccttttcaatga

>gi568815590r:81421683_81622226|GENSCAN_predicted_peptide_6|205_aa
MGGKKEKKKEKRFNPKKSLEKSKTMMCAWNSEMVMEREALEVAGAEIEFGVVYSCVEDKR
YTVRKGKGAFYNGQKLQVSQEELKEAGLLGASEGRKLHKDAARNARTSYRDGLRKTGRSL
CGKGPLRAGQGGHAYPKEWLWWARLLSMAAGEVANSAAYGFAPATLVTPLGTLSVLEWQD
MPIDDVTGTFDWLYNNRGDILVACF

>gi568815590r:81421683_81622226|GENSCAN_predicted_CDS_6|618_bp
atggggggaaaaaaggaaaagaaaaaagaaaagcgttttaatccaaagaagagcttggag
aagtcgaagaccatgatgtgtgcatggaacagtgagatggtcatggagagggaagcactg
gaagtggccggggcagagatagaatttggagttgtgtacagttgtgtggaagacaagagg
tacactgtcaggaaaggaaaaggtgccttttataatggtcaaaaactacaggtttcacaa
gaagaactgaaggaagcggggcttcttggcgcttctgaagggagaaagctgcacaaggat
gccgccaggaatgctcgcacctcctaccgggatggcctgcgtaagacggggcggtctctg
tgcggaaaaggtcctctgagagcaggtcaaggtggccacgcatatcctaaagaatggttg
tggtgggctagactgctgtcaatggcagctggcgaggtggccaactcagctgcatatggg
tttgcaccggccacactggtgactccactaggaactctcagcgtcctagagtggcaagat
atgcccattgatgatgtcactggtacttttgactggctttacaataatcgtggggatatt
cttgttgcatgcttttaa