GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:06:07

Sequence gi568815590r:80876547_81093227 : 216681 bp : 41.05% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1017   1012    6                              -0.45
 1.03 Term -   1534   1388  147  1  0   96   43    98 0.310   3.02
 1.02 Intr -   3766   3625  142  0  1   55   36    70 0.338  -2.07
 1.01 Init -   4482   4373  110  0  2   67  107    69 0.603   6.44
 1.00 Prom -   4701   4662   40                              -6.75

 2.00 Prom +   7481   7520   40                              -3.65
 2.01 Sngl +  10520  10735  216  1  0   37   54   210 0.509   7.42
 2.02 PlyA +  13104  13109    6                               1.05

 3.00 Prom +  14335  14374   40                              -8.45
 3.01 Init +  17193  17451  259  2  1   63   36   220 0.974  10.42
 3.02 Term +  18885  19111  227  1  2   85   46   235 0.997  14.96
 3.03 PlyA +  19319  19324    6                               1.05

 4.06 PlyA -  21385  21380    6                               1.05
 4.05 Term -  29987  29904   84  2  0   60   49   127 0.264   2.67
 4.04 Intr -  34659  34303  357  0  0   69   97   125 0.124   6.03
 4.03 Intr -  40591  40455  137  2  2   74   77    64 0.029   3.27
 4.02 Intr -  55869  55786   84  1  0   79   93    71 0.149   5.57
 4.01 Init -  69949  69898   52  1  1   80   90    27 0.504   3.47
 4.00 Prom -  77626  77587   40                              -5.25

 5.13 PlyA -  79907  79902    6                               1.05
 5.12 Term -  81594  81409  186  0  0   37   43   147 0.331   1.61
 5.11 Intr -  82498  82446   53  2  2  102   88    30 0.621   2.11
 5.10 Intr -  93494  93404   91  2  1   88   75    77 0.344   5.05
 5.09 Intr -  94361  94158  204  2  0  119   51    68 0.085   4.67
 5.08 Intr -  99434  99280  155  0  2   62   26    84 0.007  -1.53
 5.07 Intr - 100360 100036  325  1  1  103  -31   315 0.046  15.52
 5.06 Intr - 103948 103889   60  1  0   57  107    64 0.344   3.21
 5.05 Intr - 108831 108230  602  1  2   46   86   610 0.861  47.90
 5.04 Intr - 110920 110824   97  1  1  107   98   109 0.996  12.46
 5.03 Intr - 113344 113111  234  1  0   94   45   107 0.642   3.96
 5.02 Intr - 114984 114933   52  2  1   90   77    18 0.607  -1.11
 5.01 Init - 116681 116557  125  2  2   87   94   152 0.946  13.41
 5.00 Prom - 117692 117653   40                              -6.55

 6.04 PlyA - 118355 118350    6                              -0.45
 6.03 Term - 118494 118430   65  1  2   80   48    65 0.539  -1.23
 6.02 Intr - 119720 119485  236  1  2   41   61   188 0.524   7.81
 6.01 Init - 134904 134888   17  0  2   91   95    29 0.045   3.61
 6.00 Prom - 142077 142038   40                              -4.15

 7.00 Prom + 142204 142243   40                              -7.45
 7.01 Sngl + 142386 142757  372  2  0   44   42   244 0.832  11.27
 7.02 PlyA + 144295 144300    6                               1.05

 8.11 PlyA - 144889 144884    6                               1.05
 8.10 Term - 150252 150089  164  1  2   80   39   141 0.258   5.52
 8.09 Intr - 157261 156939  323  0  2   82   86   122 0.713   5.98
 8.08 Intr - 167564 167332  233  2  2   29   74   111 0.167  -0.55
 8.07 Intr - 174280 174191   90  1  0   39   20   135 0.356   1.07
 8.06 Intr - 177545 177415  131  0  2   36  105   115 0.605   7.49
 8.05 Intr - 179162 178995  168  0  0   15   88   116 0.374   3.30
 8.04 Intr - 197353 197213  141  2  0  140   64    49 0.973   7.10
 8.03 Intr - 197541 197416  126  1  0   83   86    56 0.948   4.63
 8.02 Intr - 197802 197705   98  2  2   90  105    54 0.680   6.03
 8.01 Intr - 213326 213137  190  0  1   97   73    46 0.453   1.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100360  99998  363  1  0  103   43   320 0.911  22.58
S.002 Term + 188390 188574  185  0  2   76   36   179 0.879   8.22
S.003 Term - 196970 196840  131  0  2   46   54   100 0.942  -0.24


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_1|132_aa
MTDTAAEYSHVMDTYNSILILSVTLNSIKALEFLQAWPSITAIHPWPQVSAHDSDWAIQK
SFTGIFPADAHSKDFLCTCSQGGQQCFSNFDQSTRTVGENGFYLQEEDRVQGCEFSFKVH
TKLHTILMSVLI

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_1|399_bp
atgacagatactgcagcagaatacagccatgtcatggatacatataacagcatactcata
ctctcagtaaccctgaatagtatcaaagctttagaatttctacaagcctggccatccatc
acagccatccacccttggccacaagtgtccgctcatgattcggactgggccatccagaaa
tcattcactgggatttttccagctgatgcacatagcaaagacttcctctgcacctgttca
caaggtggacaacagtgcttctcaaactttgaccaaagcacgcggacagtaggggagaat
ggattctatctgcaggaagaagacagagtccagggctgcgagttttcattcaaagttcac
actaaacttcacactattcttatgtctgttttaatataa

>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_2|71_aa
MKEQLKLAPTNGVSAAGLCDSLQCLSGVKKVNSVAINCGSQSMVHGPAAAAAAPENLQEM
QNLRPHPRPTE

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_2|216_bp
atgaaagagcagctgaaattggctcccacaaatggtgtttctgctgcaggactgtgtgat
agtctccagtgtctctcaggagtgaagaaagtgaactcagtggctataaactgtggttct
caaagtatggtccatggaccagcagcagctgctgcagcccctgaaaacctgcaagaaatg
caaaacctcaggccacaccccaggccaactgaatga

>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_3|161_aa
MRIPPGRRAPVGFHFSARAHAHSERTPRPGFRPRLLPAGSRLPVNTRGFAERGGCYWRSP
SRPPLRLAPELSVTRTVQRDFGATAGRKPAAMSSAALWSGPAGKELMSLANSQQGSEALR
PKTIKELNAANNHGRELRSGFSTSPSLEMTAALADTLIAAL

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_3|486_bp
atgcggattcctcctgggcggcgggccccagtaggctttcacttttctgcaagggcgcac
gcccactccgagcgaactccacgtcctggttttcgtcctcgcctccttcccgccggcagc
cggctgcctgtaaacacgcgggggttcgcagaaagaggcggctgctattggaggagccca
tccaggcctcccctacgcctagctccggagctgtcagttactcgaacagtgcaacgagat
tttggcgccacagctgggaggaagccagctgccatgtcatcagccgccctgtggagtggc
cctgctggcaaggaactgatgtctttagccaacagccagcaaggatctgaggccctcaga
ccaaaaaccatcaaagaactaaatgctgccaacaaccacgggagggagctgagaagtgga
ttctccaccagtcccagcctagagatgactgcagccctggctgacaccttgattgcagct
ttgtga

>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_4|237_aa
MTSFDSKFSHPGHADARAVEAHPGWDRCQTVSDEGEMAMKTGAEAERAPLLHAEDYLFTV
CKLIPPIKLSFLLFSNSRDLLEGKMQIPLEESRHSLSFVKQEMKPCPNPLSPVNISLSSQ
HNCLAGTDVFICQLDPHKNLQPKWTGPYTVILSKPTAARVQGLPHWIHHTRLKLTPKATP
SSKTLTAGNTLRVPVYNNLNNNNNNKRSLKSTSGSLEEQSLLLLRSPHIAPSESEKE

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_4|714_bp
atgacctcctttgactccaagttctcacatccaggtcatgctgatgcaagagcagtagaa
gctcaccctggctgggataggtgccaaacagtcagtgatgaaggagagatggctatgaaa
actggagccgaagctgagagagcacctttgctccatgctgaagactatctcttcacagtt
tgcaaactgataccgccaataaagctctcctttctactatttagcaattctagggatctt
ttggaaggcaaaatgcaaataccactggaagagtccagacacagtctttcatttgtgaag
caggaaatgaagccatgccccaaccccctctcccccgtcaacatctccttgtcctctcaa
cataactgtcttgcaggcacagacgtgtttatctgccaactcgaccctcacaaaaaccta
caaccaaagtggacaggcccctacactgtgatactcagcaagccaactgcagcgagagtc
caaggactcccccactggatccatcacaccaggctcaagctcacccccaaggctactcct
tcctccaaaactttaacagcgggcaacaccctcagagtccctgtatataataacctaaac
aacaacaacaacaacaaaagatccttaaagtccaccagcgggtccctggaagagcagagc
ctgctgcttctgcgaagccctcatattgctccatctgaaagtgagaaagaataa

>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_5|727_aa
MGPAGSLLGSGQMQITLWGSLAAVAIFFVITFLIFLCSSCDREKKPRQHSGDHENLMNVS
RGSSAVWPGPPPTAAAAPGSSLEMRIFLGVRPSKRLASTPGDPVVCSSVRATGLELGFPL
FYSRSAAALGEIGREWQPSDKEMFSRSVTSLATDAPASSEQNGALTNGDILSEDSTLTCM
QHYEEVQTSASDLLDSQDSTGKPKCHQSRELPRIPPESAVDTMLTARSVDGDQGLGMEGP
YEVLKDSSSQENMVEDCLYETVKEIKEVAAAAHLEKGHSGKAKSTSASKELPGPQTEGKA
EFAEYASVDRNKKCRQSVNVESILGNSCDPEEEAPPPVPVKLLDENENLQEKEGGEAEES
ATDTTSETNKRFSSLSYKSREEDPTLTEEEISAMYSSVNKPGQLVNKSGQSLTVPESTYT
SIQGDPQRSPSSCNDLYATVKDFEKTPNSTLPPAGRPSEEPEPDYEAIQTLNREEEKATL
GTNGHHGLVPKENDYESITRQSSPKSCASAPGDLDPAGEGMGRDVPGVSSVFVPSYFGIR
YQQPLPKVLEDMPLCLSSTDHSAAISQTLPAGTEPCLVTALPNSQAAKMRPQVHLGRQML
VLFVTTFAKTCTLLLTSFETVPKDDVKLQPVCSDPPGPKKTVSASACKGPESAYKVRCHT
GHFLPGPLLAASESTGKEDEKKRSKNTFNLAIRSFCHEWHPNAGSLKWRSSGTFRDSQRG
TFVLHQQ

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_5|2184_bp
atggggcccgcggggagcctgctgggcagcggacagatgcagatcaccctgtggggaagt
ctggctgctgtcgccattttcttcgtcatcaccttcctcatcttcctgtgctctagttgt
gacagggaaaagaagccgcgacagcatagtggggaccatgagaacctgatgaacgtgagc
aggggttcttctgcagtgtggcctggacctccacccacagcagcagcagcacctgggagc
tccttagaaatgcgaattttcctgggggtgaggcccagtaaaaggctcgcaagcacccca
ggtgatccagttgtatgctcgagtgtgagagccactggcctagagcttgggttcccgctg
ttctactcaaggtcagcagcagccctgggcgagataggaagagagtggcagccttcagac
aaggagatgttcagccgttcagttactagcctggcaacagatgctcctgccagcagtgag
cagaatggggcactcaccaatggggacattctttcagaggacagtactctgacctgcatg
cagcattacgaggaagtccagacatcggcctcggatctgctggattcccaggacagcaca
gggaaaccaaaatgtcatcagagtcgggagctgcccagaatccctcccgagagcgcagtg
gataccatgctcacggcgagaagtgtggacggggaccaggggctggggatggaagggccc
tatgaagtgctcaaggacagctcctcccaagaaaacatggtggaggactgcttgtatgaa
actgtgaaagagatcaaggaggtggctgcagctgcacacctggagaaaggccacagtggc
aaggcaaaatctacttctgcctcgaaagagctcccagggccccagactgaaggcaaagct
gagtttgctgaatatgcctcggtggacagaaacaaaaaatgtcgtcaaagtgttaatgta
gagagtatccttggaaattcatgtgatccagaagaggaggccccaccacctgtccctgtt
aagcttctggacgagaatgaaaaccttcaggagaaggaagggggagaggcggaagagagt
gccacagacacgaccagtgaaactaacaagagatttagctcattgtcatacaagtctcgg
gaagaagaccccactctcacagaagaagagatctcagctatgtactcatcagtaaataaa
cctggacagttagtgaataaatcggggcagtcgcttacagttccggagtccacctacacc
tccattcaaggggacccacagaggtcaccctcctcctgtaatgatctctatgctactgtt
aaagacttcgaaaaaactccaaacagcacacttccaccagcagggaggcccagcgaggag
ccagagcctgattatgaagcgatacagactctcaacagagaggaagaaaaggccaccctg
gggaccaatggccaccacggtctcgtcccaaaggagaacgactacgagagcataactcgc
cagtcctccccaaagagttgcgcatcagcacctggggatctggaccctgcgggtgaaggg
atggggagggacgtccctggagtctcttctgtctttgttccttcttattttggcattcga
tatcagcagcctctccccaaagtacttgaagacatgccattatgtctttccagtacggat
cacagtgctgccatatcacagaccctgccagccggcacagaaccatgcctcgtcacagct
ctgcccaactcacaggctgccaagatgaggccacaggtccacctagggcggcagatgctg
gtgctatttgtcacgacttttgccaaaacatgtacactgttgctcacatctttcgaaaca
gtgcctaaggatgatgtcaagttacagccagtttgctctgatcccccaggacctaagaaa
actgtgagtgcttcagcatgcaaagggcctgagagcgcatacaaagtcagatgccacact
ggacacttcctgcctggccccctccttgcagcgagtgaaagcacaggaaaagaggatgaa
aagaaaagaagtaaaaacacctttaacctagctatccggtccttctgtcatgaatggcat
ccaaatgctggctctttgaagtggagaagcagtgggaccttcagagacagccaaaggggg
acatttgtgctgcaccagcagtga

>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_6|105_aa
MEEGERPLKKSRWQLLVQPLNPPALPTTTGTGVPQSSCRAALRGSKRRKLPPQLGPLSLR
TAVHLTQKRAPDDDHSVRCENFVHRGTLVCCEATPAVLMSVLRDG

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_6|318_bp
atggaggaaggtgaaaggcccctaaagaagagtaggtggcagttgctggtgcagccactc
aacccgccagcactgcccacgaccacggggactggtgtcccacagtcctcctgcagagca
gcacttagagggtccaagaggagaaagctgcccccgcaactggggcctttgtccctgagg
actgcagtgcatctgactcagaaacgtgcacctgatgatgatcattctgttcgctgtgag
aattttgtccacagaggcaccctggtttgctgcgaagccacccctgccgtcttgatgtct
gtgctcagggatggctga

>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_7|123_aa
MWQSLELPRHLLNGFDKNADSDMDNKVPAKVVSDGNGKLVGNWSKDHSCYAKRLAALCPC
PRGLWNFEFETNDLGYLVEEISKQQSIQEEAENKSLENLQPDDAIKKKNPFSGRNSSQLQ
KFA

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_7|372_bp
atgtggcaaagtttggaacttcctagacacttattgaatggctttgataaaaatgctgat
agtgatatggacaataaagtccctgctaaagtggtctcagatggaaatggcaaacttgtt
gggaactggagtaaagatcactcttgctatgcaaagagactggcagcattgtgcccttgc
cctagaggtctgtggaactttgaatttgagacaaatgatttaggatatctggttgaagaa
atttctaagcagcaaagcattcaagaggaagcagagaataaaagtttggaaaatttgcag
cctgatgatgcaattaaaaagaaaaacccattttctgggagaaattcaagccagctgcag
aaatttgcctaa

>gi568815590r:80876547_81093227|GENSCAN_predicted_peptide_8|554_aa
XLFCFLNEHAGRPFFMDSHVSACHASRGTNNPFVLNCLFKDVCNVAVEDKAVEAKDSVSL
QSKGFFAAPSSLMILTGKTPTLRNTALSPRHIFTYTANNLAAFPGSAHMSARVPTPGQCS
PQWVWKHQACCSSLRGAQGLCSANIFSVLPFLTPQLKAAPTPQAVPTSTVPLWFSSVIVT
AMLLDENKIPRNPTYKGCEGPLQGELQTTAQRNKRGHKQMEEHSMLMDRKNQYRENGHTA
QGLANYDLQAEYILAPIFVNKVLLEHRHTRPLATVDGCFRAIVSELMQQECEDAIAELTH
QLMDSSTYFSPFIASKVTWRVVWRMNAKGARVVGNLLALTVQEALWAVYFILHTPDSSSL
KRRRKRNLHIHSKTRKSGRTTISGEGYLRIPRRVSVSQNGALFQFCWVALARTRVQVSLV
KTHPELEFTCLGLLMNVIISIKKSPTVLMKTVREPDVTETAGRGIPWTGYVGFRERSCLT
KSSVSEVLKFHSVEKEINIEGTPWRCCLQQQNWQVPGRHLRVQGNCWPICDSAAMPPILP
ACSFPAEFPVTTET

>gi568815590r:80876547_81093227|GENSCAN_predicted_CDS_8|1665_bp
natttgttttgttttttaaatgagcatgctgggagaccattctttatggactctcacgtt
tctgcatgtcatgcaagcagaggcactaacaacccttttgttctaaactgtcttttcaag
gatgtttgtaatgtagctgtagaagataaagctgtagaagctaaagatagtgtttccctc
cagagcaaagggttctttgctgctccctcttccctcatgatcctcactggcaaaacccca
accctgcgtaacacagctctctccccacgccacatcttcacctacactgctaataatctt
gctgcctttcctggatctgcccacatgtctgcacgtgtgcccacacctggccagtgctcc
cctcagtgggtgtggaagcaccaggcatgctgtagctctctgaggggtgcccaaggtctg
tgctcagctaacattttctcagtgctgcctttcctgactccccaactcaaagcagcgccc
actccccaggcagtccctacctccacagtgcctctgtggttttcttcagtgattgtcaca
gctatgctgctagatgagaataaaatacctaggaatccaacttacaagggatgtgaagga
cctcttcaaggagaactacaaaccactgctcaacgaaataaaagaggacacaaacaaatg
gaagaacattccatgctcatggataggaagaatcaatatcgtgagaatggccatactgcc
caagggttggcaaactatgacctgcaagctgaatacattctggcacctatttttgtaaat
aaagttttattggaacacaggcacactcgtcctttagctactgttgatggctgctttcgt
gcaatagtgtcagagctcatgcagcaggaatgtgaggatgcgattgcggagttgactcac
cagctgatggactcaagcacctacttctctcctttcattgcctcaaaagtcacttggaga
gttgtgtggaggatgaatgcaaaaggggcaagagtagttgggaacctcttggccttgacc
gttcaagaagccttgtgggctgtttactttatccttcacactccagattcttcaagttta
aaaagaagaagaaaaagaaatctgcacatccacagcaaaactagaaagtcagggagaact
accatcagtggagaaggatatttaagaattcccagaagggtttcagtgtcccagaatgga
gctctgtttcagttctgctgggtggctttagccagaacaagagttcaggttagtttggta
aaaacacatcctgaactggagttcacttgcttgggccttcttatgaatgtcatcattagt
attaagaagtcaccaaccgtcctcatgaaaactgtcagagagccagatgtaacagaaact
gctgggcgtggcattccatggacaggatatgtgggtttcagggagaggtcatgtttgact
aaatcgtcagtatcagaagtcctaaaattccattcggtggaaaaagaaatcaatattgaa
gggactccttggaggtgctgcctgcagcagcagaactggcaggtccctggaagacacctt
cgtgtgcagggtaattgctggcccatctgtgactcagcagccatgcctcctatcctgcct
gcttgttcctttcctgcggaatttccggtaaccactgagacctga