GENSCAN 1.0	Date run: 16-Aug-121	Time: 14:36:39

Sequence gi568815590r:79938119_80164595 : 226477 bp : 39.24% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1031   1174  144  1  0  116   38    84 0.842   3.13
 1.02 PlyA +   1857   1862    6                               1.05

 2.00 Prom +   2909   2948   40                              -3.25
 2.01 Sngl +  45199  45528  330  0  0   88   44   306 0.992  21.97
 2.02 PlyA +  45612  45617    6                               1.05

 3.00 Prom +  46612  46651   40                             -10.15
 3.01 Init +  46705  47726 1022  0  2   49   72   470 0.060  34.70
 3.02 Intr +  48307  49703 1397  1  2    2   24   364 0.001   9.26
 3.03 Intr +  56946  57071  126  1  0   72   69    73 0.017   3.53
 3.04 Intr +  66147  66304  158  1  2    0   -4   144 0.027  -4.79
 3.05 Term +  66477  66740  264  2  0   67   37   295 0.406  16.82
 3.06 PlyA +  67289  67294    6                               1.05

 4.00 Prom +  67822  67861   40                              -6.15
 4.01 Sngl +  68279  69691 1413  1  0   65   42   548 0.989  43.59
 4.02 PlyA +  69991  69996    6                               1.05

 5.00 Prom +  70187  70226   40                              -6.35
 5.01 Sngl +  70241  70609  369  1  0   67   41   200 0.866   9.06
 5.02 PlyA +  71305  71310    6                               1.05

 6.03 PlyA -  71709  71704    6                               1.05
 6.02 Term -  91197  91150   48  0  0  121   46     9 0.589  -3.67
 6.01 Init -  92130  91903  228  0  0   92   80   421 0.814  40.12
 6.00 Prom -  92312  92273   40                             -13.01

 7.04 PlyA -  92982  92977    6                               1.05
 7.03 Term -  94832  94705  128  0  2   94   48    71 0.154   1.16
 7.02 Intr -  95017  94920   98  0  2   58   58   113 0.154   4.03
 7.01 Init -  96235  96051  185  1  2   53   89   181 0.165  11.37
 7.00 Prom -  99775  99736   40                              -4.75

 8.14 PlyA - 100793 100788    6                               1.05
 8.13 Term - 105476 105377  100  1  1   58   54   109 0.214   1.12
 8.12 Intr - 115312 115164  149  1  2   81   32   195 0.937  11.31
 8.11 Intr - 126475 126360  116  2  2   41   98   204 0.986  15.95
 8.10 Intr - 135508 135378  131  0  2   81   53    29 0.085  -1.88
 8.09 Intr - 136726 136472  255  0  0   89  105    84 0.105   5.84
 8.08 Intr - 146390 146321   70  0  1  104   31    44 0.000  -2.38
 8.07 Intr - 149596 149525   72  2  0   31   96    81 0.003   1.66
 8.06 Intr - 150201 149944  258  1  0   69   13   136 0.000   0.71
 8.05 Intr - 164238 164154   85  0  1   30   87    87 0.001   1.27
 8.04 Intr - 171817 171710  108  1  0   76   76    79 0.022   5.06
 8.03 Intr - 195054 194988   67  2  1   57  115    60 0.387   3.59
 8.02 Intr - 195647 195560   88  0  1   98   64    71 0.208   3.81
 8.01 Init - 212654 212489  166  2  1   63   90    84 0.038   5.94
 8.00 Prom - 213668 213629   40                              -2.55

 9.02 PlyA - 214988 214983    6                               1.05
 9.01 Term - 217410 217299  112  2  1   97   36    96 0.257   2.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 176537 176743  207  1  0   78   48   150 0.805   6.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_1|47_aa
NDFAHIEKTSLVVTSHSYSFESRTNTPLTKSLLAKEHTDSLSLIMMQ

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_1|144_bp
aatgattttgctcacattgaaaaaacatctctagtggtcacatcacattcttactcattt
gaaagcaggaccaacactcctttgacaaagtcattgcttgccaaggagcacacggattcc
ttaagtctcatcatgatgcagtaa

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_2|109_aa
MGKKQSRKTGNSKKQSASPPPKERSSSPATEQSWTENDFDELREEGFRRSNYSELQEETQ
TKGKEVENFEKNLDECITRITNTEKCLKELTELKAKARELREECRSLRS

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_2|330_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaacgcagctcctcaccagcaacggaacaaagctggacggagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaactactccgagctacaggaggaaacccaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagacgaatgtataactagaata
accaatacagagaagtgcttaaaggagctgacagagctgaaagccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagctga

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_3|988_aa
MGDFNTPQSTLDRSMRQKVNKDTQELNSALHHADLIHIYRILHPKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKCKRSEIITNCLSDHSAIKLQLRIRKLTQNRSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNKNKDTTYRNLWDTVKSVCRGKFIALNAHKRKQERSKMDTLTSQLE
ELKKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIK
KKREKNHIDAIKNDKGDITTDPTEIQTNIREYYKHLYANKLENLEEMDKFLDTYNLPRLN
QEEVDSLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRAIRQEKEIKGIQLGKEEVN
LSLFADDMIVYLENPVVSAQNLLKLIRNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSE
LPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIMKMA
ILPKVIYRFNAIPIKLPMTFFTELEKTTFKLIWNQKRAHIAKSILSQKNKAGGITLPDFK
LYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHSYNYLIFDKPDKNKQWGKDSLFNKWC
WENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMEKDFMS
KTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFTTYSSDKGLISRIYNE
LKQIYKKKSNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMLIKTTMRYHLTR
VRMAIIKKSGNNRCWRGCGEIGTLLHEYNEQNLYDVIFIGLLLYPPDQINSLEAGIVISL
YVTSLKYTAGYPSETKLPEEQSGSNICCSSVFAVPQPLLLIPRQTGSGVDLQQTPTDLQL
RECSSLPAMEQSWTENDFDDLREEGFRRSNFSKLKKEVRTHRKEAKNLEKRLDKWLTRIT
NAEKSLNDLMELKTTAQELRDECTSFSS

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_3|2967_bp
atgggagactttaacaccccacagtcaacattagacagatcaatgagacagaaagttaat
aaggatacccaggaattgaactcagctttgcaccacgcggacctaatacacatctacaga
attctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaaagatcagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactacaactcaggattaggaaactc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacaagaacaaagacaca
acataccggaatctctgggacacagtcaaatcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaatggacaccctaacatcacaattagaa
gaactaaaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaaggctaataaag
aagaaaagagagaagaatcacatagacgcaataaaaaatgataaaggggatatcaccacc
gatcccacagaaatacaaactaacatcagagaatactataaacacctctacgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacaacctcccaagactaaac
caggaagaagttgactctctgaatagaccaataacaggctctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag
agggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaac
ttgtccctgtttgcagatgacatgattgtatatctagaaaaccccgttgtctcagcccaa
aatctccttaagctgataagaaacttcagcaaagtctcaggatacaaaatcaatgtgcaa
aaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagtgaa
ctcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaagaggataca
aacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaatggcc
atactgcccaaggtaatttatagattcaatgccatccccatcaagctaccgatgactttc
ttcacagaattggaaaaaactactttcaagctcatatggaaccaaaaaagagcccacatc
gccaagtcaatcctgagccaaaagaacaaagctggaggcatcacgctacctgacttcaaa
ctatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatata
gatcaatggaacagaacagagccctcagaaataacgccgcatagctacaactatctgatc
tttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgt
tgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttat
acaaaaatcaattcaagatggattaaagacttaaatgttagacctaaaaccataaaaacc
ctagaagaaaacctaggcattaccattcaggacataggcatggaaaaggacttcatgtct
aaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgg
gagaaaattttcacaacctactcatctgacaaagggctaatatccagaatctacaatgaa
ctcaaacaaatttacaagaaaaaatcaaacaaccccatcaaaaagtgggcaaaggacatg
aacagacacttctcaaaggaagacatttatgcagccaaaaaacacatgaaaaaatgctca
ccatcactggccatcagagaaatgctaatcaaaaccacaatgagataccatctcacacga
gttagaatggcaatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaa
ataggaacacttttacacgaatacaatgaacagaacttatatgatgttatatttattggt
ttacttctctatccccctgaccagatcaactccctggaagcagggattgtcattagtctg
tatgtcactagccttaaatacacagccgggtacccctctgagacgaagcttccagaggaa
caatcaggcagcaacatttgctgttcatcagtattcgctgttccgcagcctctgctgctg
atacccaggcaaacagggtctggagtggatctccagcaaactccaacagacctgcagctg
agggaatgcagctccttgccagcaatggaacaaagctggacagagaatgactttgatgac
ttgagagaagaaggcttcagacgatcaaacttctctaagctaaagaaggaagtcagaacc
catcgcaaagaagctaaaaaccttgaaaaaagattagacaaatggttaactagaataacc
aatgcagagaagtccttaaatgacctgatggagctgaaaaccacggcacaagaactacgt
gacgaatgcacaagcttcagtagctga

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_4|470_aa
MNAEITKIRAELKETETQKNLQIINESRSWFFERINKIDRPLARLIKKKREKNHIDAIKN
DKGDITTDPTEIQTNIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITG
SEIEAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGTLPNSFYEASII
LIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFN
ICKSINVIQHINRTKDKNHLIISIDAEKAFDKIQQPFMLKTLKQLGIDGTYLKIIRAIYE
KPTADIILNGQKLEAFPLKTGARKGCPLSPLLFNTVLEVLARKIRQEKEIKGIQLGKEEV
KLSLFADDMIVYLENPIISAQNLLKLIRNFSKVSGYKINVQKSQAFLYTNNRQTESQIMS
ELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCS

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_4|1413_bp
atgaacgcagaaataactaagatcagagcagaactgaaggagacagagacacaaaaaaac
cttcaaataatcaatgaatccaggagctggttttttgaaaggatcaacaaaattgataga
ccgctagcaaggctaataaagaagaaaagagagaagaatcacatagacgcaataaaaaat
gataaaggggatatcaccaccgatcccacagaaatacaaactaacatcagagaatactat
aaacacctctacgcaaataaactagaaaatctagaagaaatggataaattcctcgacaca
tacaccctcccaagactaaaccaggaagaagttgaatccctgaatagaccaataacaggc
tctgaaattgaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagacgga
ttcacagctgaattctaccagaggtacaaggaggagctggtaccattccttctgaaacta
tttcaatcaatagaaaaagagggaaccctccctaactcattttatgaggccagtatcatc
ctgataccaaagcctggcagagacacaaccaaaaaagagaattttagaccaatatccttg
atgaacatcgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaagtaggcttcattcctgggatgcaaggctggttcaac
atatgcaaatcaataaatgtaatccagcacataaacagaaccaaagacaaaaaccacttg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaa
actctcaagcaattaggtattgatggcacgtatctcaaaataataagagctatctatgaa
aaacccacagccgatatcatactgaatgggcaaaaactggaagcattccctttaaaaact
ggtgcaagaaagggatgccctctctcaccactcttattcaacacagtgttggaagttcta
gccaggaaaatcaggcaggagaaagaaataaagggtattcaattaggaaaagaggaagtc
aaactgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagcc
caaaatctccttaagctgataagaaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gacgtgaaggacctcttcaaggagaactacaaaccactgctcaacgaaataaaagaggat
acaaacaaatggaagaacattccatgctcatga

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_5|122_aa
MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIGVNRQPTEWENISAIYPSDKEL
ISRIYKELKQIYKKKSNNPIKKWVKDMNRHFSKEDIYATKRHMKKCSPSLAIREMQIKTT
MG

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_5|369_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagccaaagaaactaccatcggagtg
aacaggcaacctacagaatgggagaacatttctgcaatctacccatctgacaaagagcta
atatccagaatctacaaagaactcaaacaaatttacaagaaaaaatcaaacaaccccatc
aaaaagtgggtgaaggatatgaacagacacttctcaaaagaagacatttatgcaaccaaa
agacacatgaaaaaatgttcaccatcactggccatcagagaaatgcaaatcaaaaccaca
atgggataa

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_6|91_aa
MAALCRTRAVAAESHFLRVFLFFRPFRGVGTESGSESGSSNAKEPKTRAGGFASALERHS
ELLQKVEPLQKVEPGRGVVPNSSQDWQCPGL

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_6|276_bp
atggcggcgctgtgtcggacccgtgctgtggctgccgagagccattttctgcgagtgttt
ctcttcttcaggccctttcggggtgtaggcactgagagtggatccgaaagtggtagttcc
aatgccaaggagcctaagacgcgcgcaggcggtttcgcgagcgcgttggagcggcactcg
gagcttctacagaaggtggagcccctacagaaggtggagcccgggcggggagtagtacca
aacagttcacaagactggcagtgtcctgggttatag

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_7|136_aa
MLAGQELVLLGAAAATQLQLQIQASVCSRGPGKSPAHAGLEVPAPVRSKVVAELGCCHNL
ARHWCLQKLVVVHLVQLQPCTEPVPVAAHPAAAAGVGSGPAAQDEHSLLGRVGRMSPAGM
SKTPAEALQAMEVSSW

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_7|411_bp
atgttggcagggcaggagcttgtgctcctgggtgcagctgcagccacccagctgcagctc
cagatccaggcatctgtgtgctctcgggggcctggaaagtcccctgcccatgcaggcctg
gaagtgcctgctccagttcggagcaaagttgtggctgagcttgggtgctgtcacaacctg
gccagacactggtgcctgcagaagctggttgtggtccatctggtccagctgcagccttgc
acagagccggtgcctgtagctgctcaccctgctgcagcagctggtgtgggatctgggcca
gcagcacaagatgagcacagcctactgggcagagtgggcagaatgagcccagcaggcatg
agcaaaactccagcagaggcgctgcaggccatggaagtttccagctggtga

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_8|554_aa
MKVQALGKYSHSKWEKLANMEGLQAPCKSEIQWGSQILKLQNDLHVSHPGHADARASAVP
SSSWTLELDEIEIVSVGLHLELRSSNYMSYMCIPGFTNAGKKDRSDQGFRSRAVLVQSDS
KSEKWEKIGWRNLEELRIQCKLQLTCSDQVHKEVNIERRKRLLSSYVNELETSIRVLPSP
CYSKCDPMWFQGQQPPITRMQTLHHSKIPRAIRCEGLAYPYCPALGYSHRMERTGTWRHV
PGFKLRLLYLLALCPKTEGKPTAASVEGGESPSSSQKGPGAVSALSLLPIGLVREGAASP
TQQLRFYCSCHGHTWENSSLKNLKLSRPELLHPSLLKALSGRQHPLRCSLALSQWFSTTV
LPHCGHLTMFVDTLLVVTTGCGCGAATDICVDTHLLCARHCASEILLRLKTQDWSMKAKY
CPAAVCILYNRLDRLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTL
SQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAASDPVELGWDLKIGIAYD
FLIAAAAAGLGPTL

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_8|1665_bp
atgaaggtacaggcattgggtaaatacagccattccaaatgggagaaattggccaatatg
gaggggctacaggctccatgcaagtccgaaatccagtggggcagtcagatcttaaagcta
caaaatgatctccatgtctcacatccaggtcacgctgatgcaagagcatcagcggtacca
tcaagttcctggactcttgaacttgatgaaatcgagatagtttctgtagggctccatttg
gaattgaggagcagcaactatatgagttatatgtgcatacctggttttacaaatgcagga
aaaaaggaccggagtgaccagggtttcaggagcagagcagttcttgttcagagtgattcc
aagtcagaaaagtgggagaaaattggatggaggaacctagaagaactgaggattcagtgc
aaactacagctgacatgtagtgatcaggtccataaagaggtcaacatcgagaggagaaaa
aggctcctcagtagctacgtgaatgagcttgaaacctccattcgagttcttccatcacct
tgttactccaagtgtgatcccatgtggttccagggccagcagcctcccatcaccaggatg
cagactctgcatcacagcaagatccccagggccattagatgtgagggactggcttatcct
tactgcccggctctaggctacagccacaggatggagaggacagggacttggaggcacgta
ccaggcttcaaactgcggctcctttacttgctagctctatgcccaaagacagaaggtaaa
ccaactgctgcttcggtggaaggtggagagagcccttccagctctcagaaggggcctgga
gccgtctcagcactgagtctcttgcccattggcctggtgagggaaggagctgccagcccc
acccaacagctcaggttttactgttcttgccatgggcacacatgggaaaattccagcctt
aagaatctaaagttgtcacggcctgagctgctgcatccctctcttctgaaggcactcagt
ggcagacagcatcctcttagatgctccctcgccttaagtcagtggttctcaaccacagtt
ttgccccactgtgggcatttgaccatgtttgtagatactcttttggttgttacaactggg
tgtgggtgtggggctgctactgacatctgtgttgacacgcatctgctgtgtgccagacac
tgtgcatcagagatcctgctaaggctaaagacacaggattggagcatgaaggccaagtat
tgcccagctgcagtctgtattctatacaatagactggaccgtctgctgagaacagaccca
gtccctgaggaaggagaagatgttgctgccacgatcagtgccacagagaccctctcggaa
gaggagcaggaagagctaagaagagaacttgcaaaggtagaagaagaaatccagactctg
tctcaagtgttagcagcaaaagagaagcatctagcagagatcaagcggaaacttggaatc
aattctctacaggaactaaaacagaacattgccaaagggtggcaagacgtgacagcaaca
tctgcagcctctgatcctgtagagttggggtgggacctgaaaattggcattgcttatgac
ttcctgatagctgcagcagcagctggtctggggcccacactttga

>gi568815590r:79938119_80164595|GENSCAN_predicted_peptide_9|37_aa
XCLESPSTAQRLTIPTLSLAEIQHSHPMTPPTWFEDS

>gi568815590r:79938119_80164595|GENSCAN_predicted_CDS_9|114_bp
nnatgcctcgagtccccctccactgctcaacgtctgactattccaaccctgagccttgca
gaaatccagcactcacaccccatgacaccccctacctggtttgaggattcataa