GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:35:13

Sequence gi568815590r:6997752_7116850 : 119099 bp : 45.63% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5040   5219  180  2  0   90   91    69 0.269   6.58
 1.02 Intr +   8662   8813  152  0  2   13   82    99 0.194   0.76
 1.03 Term +   9521   9698  178  2  1   60   42   114 0.175   1.16
 1.04 PlyA +  10493  10498    6                               1.05

 2.00 Prom +  10825  10864   40                              -5.86
 2.01 Init +  12176  12318  143  1  2  106   75    99 0.543   8.03
 2.02 Term +  16186  16213   28  1  1  119   38    27 0.463  -1.65
 2.03 PlyA +  16737  16742    6                               1.05

 3.06 PlyA -  16804  16799    6                               1.05
 3.05 Term -  18348  18239  110  1  2  106   49    65 0.973   3.07
 3.04 Intr -  19111  18925  187  1  1  135   94   121 0.516  16.66
 3.03 Intr -  19665  19582   84  0  0   69  115    22 0.452   3.02
 3.02 Intr -  22982  22902   81  2  0   74   60    95 0.055   5.13
 3.01 Init -  31079  31059   21  2  0  108  100    16 0.539   4.59
 3.00 Prom -  31815  31776   40                              -4.66

 4.04 PlyA -  32371  32366    6                               1.05
 4.03 Term -  40932  40820  113  1  2   99   43    77 0.835   3.02
 4.02 Intr -  41700  41517  184  0  1  135   94    55 0.899  10.16
 4.01 Init -  45185  45108   78  2  0   77   62    93 0.952   4.79
 4.00 Prom -  51858  51819   40                              -4.66

 5.03 PlyA -  51990  51985    6                               1.05
 5.02 Term -  57792  57680  113  1  2  143   49    65 0.807   6.82
 5.01 Init -  58946  58775  172  2  1   91   91   241 0.433  22.30
 5.00 Prom -  65154  65115   40                              -4.46

 6.00 Prom +  65430  65469   40                              -9.16
 6.01 Init +  66626  66826  201  1  0  103    9   138 0.597   6.28
 6.02 Intr +  72008  72119  112  1  1   29   69    36 0.021  -4.25
 6.03 Intr +  74335  74508  174  2  0   61  116    76 0.578   7.61
 6.04 Intr +  76257  76352   96  1  0  118   75    21 0.768   3.78
 6.05 Intr +  80303  80371   69  0  0   57   77    59 0.541   0.85
 6.06 Term +  83454  83533   80  1  2   57   55   143 0.882   5.83
 6.07 PlyA +  84426  84431    6                               1.05

 7.00 Prom +  84756  84795   40                              -9.36
 7.01 Init +  85220  85328  109  1  1   86   58    59 0.941   3.08
 7.02 Term +  85357  85607  251  2  2  -26   55   373 0.768  18.47
 7.03 PlyA +  85730  85735    6                               1.05

 8.00 Prom +  89560  89599   40                              -7.56
 8.01 Sngl +  94351  94548  198  0  0  109   42   219 0.843  14.63
 8.02 PlyA + 100769 100774    6                               1.05

 9.02 PlyA - 100802 100797    6                               1.05
 9.01 Term - 105829 105590  240  1  0   39   49   180 0.186   5.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  27313  27441  129  0  0  117   45    66 0.836   3.38


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_1|169_aa
MGRSGGYAEVSSEEDPPPPSSSECIALSLPSALCPLSCREGPGAACATQSLPGLQIQLGQ
LSGSRSGGVYHERRRTQSDVITNGKFLFRKCTSSLSLSLRTQGNHHKWIRRLLLGCSFIS
SCLKWLCLSLQGHQEKHGSEEGKGPHGWGDLEEGEQEQTSRERGVSLDI

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_1|510_bp
atggggcgcagcgggggctacgcagaggtgagctctgaggaggaccctccacctcccagc
tcctcagagtgcatcgcgctgtccctcccctcagccctttgtccactgtcctgcagggag
ggtcctggtgctgcctgtgccacacagtcactcccgggcctgcagatccagctgggacag
ctcagcggcagcagatccggtggagtgtaccacgaaaggcgcaggacccaaagcgacgtt
ataacaaacggcaaattcctcttccgcaaatgcacctcaagcctctcgctgagtctgagg
acacagggaaatcatcataaatggatcagaaggctgctcctgggctgcagcttcatcagc
tcttgcctgaagtggctctgcctgagcctacagggccaccaggagaagcatggcagtgag
gagggcaaaggtcctcatggctggggtgacctggaggagggagagcaggagcagacgagt
cgggagagaggagttagcctggatatatag

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_2|56_aa
MGMSCTALVPQAGCSGPPLQLCVKAAGIGRWRPGGSGVITKASPSTLRVCSSHRPP

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_2|171_bp
atgggaatgtcgtgcacagcgctggtcccacaggctgggtgctcagggccccccctgcag
ctctgtgtgaaggcagcaggcatcggccggtggaggcctgggggcagtggagtgataact
aaagcatctccctcaaccttaagagtttgcagcagtcatcgcccaccctag

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_3|160_aa
MMNAISPGPTNAITQKPFTSIGATAGYSLLLDQQPDKIIVLSTLIPTGDYSPHNLKNLFM
RMVTPAMRTLAILAAILLVALQAQAEPLQARADEVAAAPEQIAADIPEVVVSLAWDESLA
PKHPGSRKNMDCYCRIPACIAGERRYGTCIYQGRLWAFCC

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_3|483_bp
atgatgaatgcaatcagcccagggcccacaaatgccatcacccagaagcccttcacatcc
attggggccacagcaggatacagtctgttgctggaccagcagcctgataaaatcattgtc
ctctccaccctgattcctacaggagactactcaccccataacctcaaaaacctcttcatg
aggatggtgaccccagccatgaggaccctcgccatccttgctgccattctcctggtggcc
ctgcaggcccaggctgagccactccaggcaagagctgatgaggttgctgcagccccggag
cagattgcagcggacatcccagaagtggttgtttcccttgcatgggacgaaagcttggct
ccaaagcatccaggctcaaggaaaaacatggactgctattgcagaataccagcgtgcatt
gcaggagaacgtcgctatggaacctgcatctaccagggaagactctgggcattctgctgc
tga

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_4|124_aa
MVLAHIQYLDPCLAALLAHALLRTLQVTTVRRTLTLLSAFLLVALQAWAEPLPARAHEMP
AQKQPPADDQDVVLYFSGDDSCSLQVPGSTKGLICHCRVLYCIFGEHLGGTCFILGERYP
ICCY

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_4|375_bp
atggtgctggctcacatccagtacctggacccctgcttagctgctctcttagctcatgct
ttgttgcgtaccctgcaggtgactacagttaggaggaccctcaccctcctctctgccttt
ctcctggtggcccttcaggcctgggcagagccgctcccggcaagagctcatgagatgcca
gcccagaagcagcctccagcagatgaccaggatgtggtcctttacttttcaggagatgac
agctgctctcttcaggttccaggctcaacaaagggcttgatctgccattgcagagtacta
tactgcatttttggagaacatcttggtgggacctgcttcatccttggtgaacgctaccca
atctgctgctactaa

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_5|94_aa
MRTIAILAAILLVALQAQAESLQERADEATTQKQSGEDNQDLAISFAGNGLSALRTSGSQ
ARATCYCRTGRCATRESLSGVCEISGRLYRLCCR

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_5|285_bp
atgaggaccatcgccatccttgctgccattctcctggtggccctgcaggcccaggctgag
tcactccaggaaagagctgatgaggctacaacccagaagcagtctggggaagacaaccag
gaccttgctatctcctttgcaggaaatggactctctgctcttagaacctcaggttctcag
gcaagagccacctgctattgccgaaccggccgttgtgctacccgtgagtccctctccggg
gtgtgtgaaatcagtggccgcctctacagactctgctgtcgctga

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_6|243_aa
MQVCNCRCLSPGDLQEDGGAYWAQCSVWGYGKSDQSSPEEDCVLIEQVLIEQNKEIITGH
LSAIQDLRRRHEKKTAETGWACRDEYITMIRIANQMFVNRDAVSHWELYMDGSSFINPQG
ERGAGYAVVTLDTVVETRSLPQGTSAQKAELIAFIRDLELHEDIRKNVTGDVNSPAILGG
VSSFPPLRIRNNITGKRKSNQECDTTHQDGYDKQTGIEQQKDDEGDDEDKEDDDRHHGIM
NPY

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_6|732_bp
atgcaggtctgcaactgcaggtgcctctcacctggtgacctgcaggaagatggaggagca
tattgggcacagtgctcggtttgggggtacgggaaatcagatcagagcagcccagaggag
gactgtgttctaatagagcaggttctaatagagcagaataaagagatcataactggccat
ctgtcggccattcaagatctgcgcagaagacatgagaagaaaactgcagaaacaggctgg
gcttgcagggatgaatacatcacaatgattagaatagctaaccagatgtttgtaaacagg
gatgcagtaagccactgggaactatacatggatgggagtagcttcatcaacccacaagga
gagagaggtgcagggtatgcagtggtaaccctggacactgttgttgaaaccagatcattg
ccccagggcacttcagcccagaaagctgaactcattgctttcattcgggacttagaactc
catgaagatattaggaaaaatgtaactggggatgtgaacagccctgcgatattgggagga
gtatcatcctttccccccttgcgtattaggaacaatatcacagggaagcgcaaatcaaac
caagaatgtgataccacacatcaggatggatatgataaacaaacaggcattgaacaacaa
aaagatgatgaaggtgatgatgaggataaagaggatgatgacagacaccatggcatcatg
aacccttactga

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_7|119_aa
MAAAAATGTSPGSGPGDSPEGPEGEAHGASVEGAQNGEAAGLPAGPDLLDRTDLNRAHFD
PEVYLDKLHRVCPLAQLMDSETDMVRQIRAIDSDMQTLVYENYDKFTPATEIDKQHKTV

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_7|360_bp
atggcggcggcagctgccactggcactagcccggggtctggacctggggactccccagaa
gggcctgagggggaggctcacggagcgtcggtggaaggcgcacagaatggggaggcagcg
ggactccccgcggggcccgacctcctggaccgcactgatctgaacagggcgcacttcgac
ccggaagtttacctagacaagctgcatagagtgtgccctctggcccagctgatggacagt
gagacggacatggtgcggcagatccgggctatagacagcgacatgcagaccctggtctat
gagaactacgacaagttcaccccagccacggaaattgacaaacagcataaaactgtatga

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_8|65_aa
MASPSGSSEATGKPRGRDGRPRREEDDVPPEEKRLRLLLEGGSAQPEDCEDGEDALRPGR
EETGT

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_8|198_bp
atggccagcccttccggcagctccgaagccactggcaagccccgaggcagggatggccgg
cccaggagggaggaggacgacgtccctcccgaagagaagaggctacggctgttgctggag
gggggaagcgcacagcccgaggactgcgaggacggggaggacgcgctgcggccgggcagg
gaggagaccggcacctag

>gi568815590r:6997752_7116850|GENSCAN_predicted_peptide_9|79_aa
VLEVALGSALKTMPLVKPQSSNDSQPRISNSPAPHVLTAHKAGAVNVLSTVISLNPHGSS
RMQTVASHYSHFTFEETEA

>gi568815590r:6997752_7116850|GENSCAN_predicted_CDS_9|240_bp
gtactagaggtggctctgggctcggcactaaagacaatgcccctggtaaagccacagtct
agcaatgacagtcaaccacgtatcagcaacagccctgccccacacgtgctgactgcgcac
aaggccggcgctgtgaacgtgctctcaacagtgatctcactgaaccctcatggcagctct
aggatgcagacagtagcatcacattattcccattttacttttgaggaaactgaggcctga