GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:12:08

Sequence gi568815590r:42737965_42943094 : 205130 bp : 43.28% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2608   2647   40                              -2.56
 1.01 Init +   6384   6540  157  2  1   75   79    38 0.540   1.67
 1.02 Intr +   7844   8011  168  0  0   50   68   100 0.384   4.12
 1.03 Term +  15806  15960  155  0  2   87   34    55 0.125  -1.92
 1.04 PlyA +  16219  16224    6                              -0.45

 2.07 PlyA -  17053  17048    6                               1.05
 2.06 Term -  17836  17783   54  1  0   77   54    50 0.424  -1.94
 2.05 Intr -  18860  17882  979  1  1   72   84   472 0.529  36.14
 2.04 Intr -  19073  18964  110  2  2   60   27   101 0.609   0.28
 2.03 Intr -  23870  23592  279  2  0    2   53   236 0.599   9.17
 2.02 Intr -  27240  27101  140  1  2  122   89   143 0.951  17.98
 2.01 Init -  30466  30388   79  1  1   72  100    43 0.918   3.12
 2.00 Prom -  33042  33003   40                              -4.86

 3.07 PlyA -  34865  34860    6                               1.05
 3.06 Term -  34895  34875   21  2  0  104   49     4 0.008  -3.59
 3.05 Intr -  49887  49701  187  2  1   62   55   110 0.010   4.79
 3.04 Intr -  76537  76457   81  0  0  100   89    40 0.417   4.05
 3.03 Intr -  76774  76691   84  0  0   92   33   109 0.389   4.74
 3.02 Intr -  78772  78705   68  1  2   45   97    51 0.365  -0.60
 3.01 Init -  85348  85274   75  1  0   52  108    47 0.477   4.19
 3.00 Prom -  91928  91889   40                              -5.36

 4.04 PlyA -  92851  92846    6                               1.05
 4.03 Term - 100306  99998  309  1  0  121   42   275 0.515  21.26
 4.02 Intr - 101417 101222  196  1  1   69   85     8 0.776  -1.98
 4.01 Init - 105130 105060   71  1  2   80   61   178 0.919  14.82
 4.00 Prom - 105973 105934   40                              -6.46

 5.08 PlyA - 107264 107259    6                               1.05
 5.07 Term - 109020 108920  101  1  2   53   49   131 0.261   3.99
 5.06 Intr - 132148 132040  109  1  1   68   91    90 0.432   7.16
 5.05 Intr - 136042 135967   76  0  1   54   72    38 0.171  -1.68
 5.04 Intr - 149907 149764  144  2  0  120   94    87 0.508  11.90
 5.03 Intr - 158355 158290   66  2  0   25   80   105 0.055   1.42
 5.02 Intr - 159614 158662  953  2  2  104    9   292 0.015  12.81
 5.01 Init - 181134 181051   84  0  0   66   59   111 0.161   4.82
 5.00 Prom - 196914 196875   40                              -2.46

 6.02 PlyA - 197208 197203    6                               1.05
 6.01 Sngl - 198028 197438  591  1  0   86   50   192 0.925  11.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:42737965_42943094|GENSCAN_predicted_peptide_1|159_aa
MASPVENNWYLNVFRMLYKNTIDWVASKLQKFIADSSGDWEAQGKVLAGLVCGAVFFPDP
PSSGLINLDDQDTPQSFILVIILSLKNQMIKHLRPHPAHGFEGSRMELEGRCTASVSASD
SRVCGKALTPWVTRDFPNCKKRSREATAQRARLILCNGG

>gi568815590r:42737965_42943094|GENSCAN_predicted_CDS_1|480_bp
atggcatctccagttgagaataactggtatctaaatgtattcaggatgctatataaaaat
accatagattgggtggcttctaaactgcagaaatttattgctgacagttctggagactgg
gaagcccaaggaaaggtgctggcaggtctggtgtgtggtgcggtgtttttcccagacccg
ccctcaagtggcttaataaacctcgatgatcaagacacgcctcagtccttcattttggtc
atcattctttctctgaaaaatcagatgatcaagcacctgaggccacatccagcacatggc
tttgagggctcccgaatggagctggagggcagatgcacagcctctgtgagtgcctcagac
agcagagtctgcggcaaagccctgactccgtgggtcaccagggactttcccaactgcaag
aaacgctccagagaagcaactgctcagagagctagactcattctttgcaacggtgggtag

>gi568815590r:42737965_42943094|GENSCAN_predicted_peptide_2|546_aa
MLTSKGQGFLHGGLCLWLCVFTPFFKGCVGCATEERLFHKLFSHYNQFIRPVENVSDPVT
VHFEVAITQLANVPLMQLLCQLIDFSKKEVQGDGTRNGVDAVGLWTPPAEMSDSSAMPIG
GIWNWMEREYDLPDRSCSIGSADISEGVHIPMGHVHTTWSFSEPAEIWNDYKLRWDPMEY
DGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDI
TFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSKVDMNDFWENSEWEIIDASGYKHDIKYNC
CEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSL
TVFLLVITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVK
TVFLKLLPQVLLMRWPLDKTRGTGSDAVPRGLARRPAKGKLASHGEPRHLKECFHCHKSN
ELATSKRRLSHQPLQWVVENSEHSPEVEDVINSVQFIAENMKSHNETKEPMGTLDAQSDL
QCDFCS

>gi568815590r:42737965_42943094|GENSCAN_predicted_CDS_2|1641_bp
atgctgaccagcaaggggcagggattccttcatgggggcttgtgtctctggctgtgtgtg
ttcacacctttctttaaaggctgtgtgggctgtgcaactgaggagaggctcttccacaaa
ctgttttctcattacaaccagttcatcaggcctgtggaaaacgtttccgaccctgtcacg
gtacactttgaagtggccatcacccagctggccaacgtgcctttgatgcagctgctgtgt
caattaattgatttttccaagaaggaggtacagggtgatggcaccaggaatggagttgat
gctgtgggtctttggactcctccggcagagatgtctgatagcagtgccatgcccattggt
gggatctggaattggatggagagagagtatgacttgccagacaggtcctgctccataggg
tcagctgacatctctgaaggtgtccacatccccatgggccatgtccataccacctggagc
ttctccgagcctgcggaaatctggaatgattataaattgcgctgggatccaatggaatat
gatggcattgagactcttcgcgttcctgcagataagatttggaagcccgacattgttctc
tataacaatgctgttggtgacttccaagtagaaggcaaaacaaaagctcttcttaaatac
aatggcatgataacctggactccaccagctatttttaagagttcctgccctatggatatc
acctttttcccttttgatcatcaaaactgttccctaaaatttggttcctggacgtatgac
aaagctgaaattgatcttctaatcattggatcaaaagtggatatgaatgatttttgggaa
aacagtgaatgggaaatcattgatgcctctggctacaaacatgacatcaaatacaactgt
tgtgaagagatatacacagatataacctattctttctacattagaagattgccgatgttt
tacacgattaatctgatcatcccttgtctctttatttcatttctaaccgtgttggtcttt
taccttccttcggactgtggtgaaaaagtgacgctttgtatttcagtcctgctttctctg
actgtgtttttgctggtcatcacagaaaccatcccatccacatctctggtggtcccactg
gtgggtgagtacctgctgttcaccatgatctttgtcacactgtccatcgtggtgactgtg
tttgtgttgaacatacactaccgcaccccaaccacgcacacaatgcccaggtgggtgaag
acagttttcctgaagctgctgccccaggtcctgctgatgaggtggcctctggacaagaca
aggggcacaggctctgatgcagtgcccagaggccttgccaggaggcctgccaaaggcaag
cttgcaagccatggggaacccagacatcttaaagaatgcttccattgtcacaaatcaaat
gagcttgccacaagcaagagaagattaagtcatcagccattacagtgggtggtggaaaat
tcggagcactcgcctgaagttgaagatgtgattaacagtgttcagttcatagcagaaaac
atgaagagccacaatgaaaccaaggagcctatgggcactctggatgcacagtcagacctt
cagtgtgacttttgttcctga

>gi568815590r:42737965_42943094|GENSCAN_predicted_peptide_3|171_aa
MHRRTSLSNGSSINMIGPKHVLKAQRDLDKCFRLEEAHDTSPWVKICKAVCSGGITPSQR
ECELKCTGSLDRAGAELFALQVWRLPASDSYFGTGAHGLTSTCGVRGLAGSGVKLLTLTV
SVTALKAGRLELFILPGGFVVSLASGVKLQTFVVSVTAHKGSVDPKTSKLK

>gi568815590r:42737965_42943094|GENSCAN_predicted_CDS_3|516_bp
atgcatagaagaacttcattatcaaatggaagtagtataaacatgattgggcccaagcac
gtcctaaaggcacaaagagatctagacaaatgcttccgattagaagaggctcatgatact
tctccgtgggtcaagatttgtaaagcggtgtgctcgggcggcatcacacccagccagcgc
gagtgtgaactcaagtgcacgggcagccttgaccgggctggagctgagctgtttgcactg
caggtttggcgcctgcctgcatctgattcctactttgggacaggagcccatgggctgacg
agcacgtgtggggttcgtggtctcgctggctcaggagtgaagctgctgaccctcactgtg
agtgttacagctcttaaggcggggcgtctggagttgttcattcttcctggtgggttcgtg
gtctcactggcttcaggagtgaagctacagaccttcgtggtgagtgttacagctcataaa
ggcagtgtggacccaaaaacctccaaattgaaatga

>gi568815590r:42737965_42943094|GENSCAN_predicted_peptide_4|191_aa
MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTP
DCFKRECNNKLLKENAVPTIFLCTEPHDKVDAAIGLLMPPLQTPVNLSVFCDHNYTVEDT
MHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVVHFQKEKDDVSERGYVILP
NDYFEIVEVPA

>gi568815590r:42737965_42943094|GENSCAN_predicted_CDS_4|576_bp
atggtgcagtcctgctccgcctacggctgcaagaaccgctacgacaaggacaagcccgtt
tctttccacaagtttcctcttactcgacccagtctttgtaaagaatgggaggcagctgtc
agaagaaaaaactttaaacccaccaagtatagcagtatttgttcagagcactttactcca
gactgctttaagagagagtgcaacaacaagttactgaaagagaatgctgtgcccacaata
tttctttgtactgagccacatgacaaggttgatgctgctattggattactaatgccgcct
cttcagacccctgttaatctctcagttttctgtgaccacaactatactgtggaggataca
atgcaccagcggaaaaggattcatcagctagaacagcaagttgaaaaactcagaaagaag
ctcaagaccgcacagcagcgatgcagaaggcaagaacggcagcttgaaaaattaaaggag
gttgttcacttccagaaagagaaagacgacgtatcagaaagaggttatgtgattctacca
aatgactactttgaaatagttgaagtaccagcataa

>gi568815590r:42737965_42943094|GENSCAN_predicted_peptide_5|510_aa
MGGSPRPASRPVREVGGSPRPASHPIQEVLSVPGPEPGPSSANAATKARSGGGSWTRGSQ
ARPPPERSAAPAASSRTDPRVARRVPSPAPAGVRPEQRRLRPGKSLSDPGPSLLAPPAPG
PGCDGTVARSARPTGRAWRVPVGGGGRGSSRRPAAPTYPSEEALAQLRPLQRLYAEHLPR
RGQAAPTAWPDTAAALSGDPGARAADSASGPPAPRIRPPTLAQRWQRLRTVTPSAPPSPF
TRDRAPAARDFGHARRPASPPPAAHTAPPQRRRPGWSRGRGATAHARAPADPRRRAAAAA
AAAAAAAGRAPATSSLRVEASTRSALEAAATGPPPPSGRALAEARQIAPRLSGVAGDGGG
ADAESGSRPGMAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFRNVHQ
NIHPENQELVRVLREQLQTEQDAPAATRQQFYTDMYCPICLHQASFPVETNCGHLFCELA
TATSTFSNHDQSAAINIKARLSINKKITIC

>gi568815590r:42737965_42943094|GENSCAN_predicted_CDS_5|1533_bp
atggggggcagcccccgcccggccagccgccccgtccgggaggtggggggcagcccccgc
ccggccagccaccccatccaggaggtcctttcagttcccgggccggagccgggcccgtcc
tccgcgaacgcggcaacaaaggcgaggagcggcggcgggtcctggacgcggggcagtcag
gctcggccacccccagagcgcagcgcagccccagctgcgagcagccgcacggatcccaga
gtcgcccgccgcgttcccagcccagccccggccggggtccgcccggaacagcgacgcctc
aggcccggcaagtctctctcggaccctgggccgagcctcctcgccccgcccgccccaggc
cccggatgtgacggcaccgtcgcccgcagcgctcgccccacgggccgcgcgtggagggtc
ccggtaggtggcggggggagggggtcttcccgccggcccgcggcccccacgtacccaagt
gaggaggctctcgcacagctccgcccgctccagcgactctacgctgaacatcttccccgc
cgcggccaggcagcgcctaccgcctggccagacaccgccgccgctctgtcgggggatccg
ggggcccgcgcagctgactcggcctcaggcccgcctgctcctcggatccggccgccgact
ctcgcccagcgctggcagcggctccgcaccgtcacccccagcgcccctccttctcctttc
actcgggaccgcgcgccagccgcgcgcgacttcggacacgcccgccgccccgcgtccccg
cccccggccgcccacaccgctcctccccagcgccgccgccctggctggagccgaggccga
ggagccactgcgcacgctcgcgccccggccgacccgcgccgccgcgccgccgccgccgcc
gccgccgccgccgctgccgccgggcgcgcccccgccaccagttcgctgcgtgtcgaggcg
agcacgcgctccgccctggaggctgcggcgacgggtcctcctccgccgtccggtcgcgcc
ctcgcggaagctcggcaaatcgccccgcggctgtccggagtcgccggcgacggtggaggg
gccgacgcggagagcggctctagacctggaatggccaaatatcaaggtgaagttcaaagt
ttgaaactggatgatgattcagttatagaaggagtaagcgaccaagtacttgtggcagtt
gtggtcagtttcgctttgattgctaccctggtatatgcacttttcagaaatgtacatcaa
aacattcacccagaaaaccaggagctagtaagggtacttcgagaacagcttcaaacagaa
caggatgcacctgctgccactcgacagcagttctacactgacatgtactgtcccatctgc
ctgcaccaagcctccttcccggtggagaccaactgtggacatcttttttgtgaacttgcc
acagccacctcaaccttcagcaaccatgatcagtcagcagccatcaacatcaaggcaaga
ctctccatcaacaaaaagatcaccatttgctga

>gi568815590r:42737965_42943094|GENSCAN_predicted_peptide_6|196_aa
MAILPKAIYRFNGIPIQLPLTFFKELEKTTLNFIWNQKRASIAKTILSKKNKVGGITIPD
FKLYYKATVTKTAWYWYQSRYTDQWNRTEASEIMPHIYNHLIFDKPDKNKQWEKDSLFNK
WCWENWLVICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDTGMGKDF
MTKTPKATATKAKIDK

>gi568815590r:42737965_42943094|GENSCAN_predicted_CDS_6|591_bp
atggccatcctgcccaaagcaatttatagattcaatggtatccccatacagctaccactg
actttcttcaaagaattagaaaaaactactttaaatttcatatggaaccaaaaaagagcc
agtatagccaagaccatcttaagcaaaaagaacaaagttggaggcatcacaatacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaagcaga
tatacagaccaatggaacagaacagaggcctcagaaataatgccacacatctacaaccat
ctgatctttgacaaacctgacaaaaacaagcaatgggaaaaggattccctatttaataaa
tggtgctgggaaaactggctagtcatatgcagaaaactgaaactggaccccttccttaca
ccttatacaaaaattaactcaagatggattaaagacttaaatgtaagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacacaggcatgggcaaagacttc
atgactaaaacaccaaaagcaactgcaacaaaagccaaaattgacaaatga