GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:45:36

Sequence gi568815590r:33492016_33697515 : 205500 bp : 45.07% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3527   3601   75  1  0   97   93    97 0.999  10.81
 1.02 Intr +   4610   4726  117  1  0   55  100   244 0.982  22.96
 1.03 Intr +   5217   5282   66  2  0   72   83    54 0.809   2.40
 1.04 Term +   6417   6614  198  2  0  107   34   344 0.994  28.30
 1.05 PlyA +   7599   7604    6                               1.05

 2.08 PlyA -   7659   7654    6                              -0.45
 2.07 Term -   7738   7718   21  1  0   99   49    16 0.792  -2.89
 2.06 Intr -   8475   8313  163  2  1   35  116   100 0.593   7.48
 2.05 Intr -  11557  11414  144  0  0   99   90    31 0.931   3.80
 2.04 Intr -  11920  11733  188  1  2  107   94   178 0.999  18.79
 2.03 Intr -  15306  15214   93  0  0   78   90    38 0.855   3.16
 2.02 Intr -  17917  17731  187  0  1   60   91    -3 0.717  -3.11
 2.01 Init -  20598  19952  647  0  2   66   78   254 0.753  17.00
 2.00 Prom -  34509  34470   40                              -3.96

 3.00 Prom +  41756  41795   40                              -2.16
 3.01 Sngl +  48041  48382  342  1  0   60   54   252 0.705  15.27
 3.02 PlyA +  48843  48848    6                               1.05

 4.07 PlyA -  49437  49432    6                               1.05
 4.06 Term -  56852  56738  115  1  1   64   48   116 0.629   3.24
 4.05 Intr -  57477  57395   83  0  2  117   70    18 0.457   1.34
 4.04 Intr -  59070  59029   42  0  0  126   98    29 0.744   6.14
 4.03 Intr -  59374  59329   46  0  1  101   88    72 0.998   6.91
 4.02 Intr -  66756  66600  157  1  1  148   96   134 0.996  19.27
 4.01 Init -  82247  82082  166  2  1   31   60   192 0.588   8.93
 4.00 Prom -  96910  96871   40                              -2.46

 5.11 PlyA -  99335  99330    6                               1.05
 5.10 Term - 100197  99998  200  1  2  112   55   281 0.986  24.76
 5.09 Intr - 101732 101518  215  1  2   81   75   373 0.361  33.66
 5.08 Intr - 105758 105280  479  2  2   84   47   272 0.067  14.55
 5.07 Intr - 107750 107650  101  0  2   65   65    51 0.392   0.33
 5.06 Intr - 125663 125531  133  2  1   74   76    58 0.041   3.42
 5.05 Intr - 139896 139752  145  2  1   69    6   112 0.012   1.38
 5.04 Intr - 144319 144183  137  1  2   69   73    54 0.085   1.37
 5.03 Intr - 148154 148080   75  2  0  104   89    30 0.363   4.41
 5.02 Intr - 155291 155220   72  2  0  104  105   -18 0.248   1.10
 5.01 Init - 163614 163537   78  0  0   81   88    43 0.427   4.66
 5.00 Prom - 201241 201202   40                              -1.26


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  40510  40397  114  1  0   83   38    97 0.953   2.77
S.002 Init -  41398  41336   63  1  0   45   82    81 0.832   2.35
S.003 Term - 105758 105249  510  2  0   84   43   278 0.808  17.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:33492016_33697515|GENSCAN_predicted_peptide_1|151_aa
EKALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKALEQQEAESDSSDTEEKDDDD
DDEEDVGKREFVEDGEVDESDISDFEDMDKLDASSDEDQDGKSSSEEEEEKALSAKHKGK
MPLRGPLQRKRAYVEIEYEQETEPVAKAKTT

>gi568815590r:33492016_33697515|GENSCAN_predicted_CDS_1|456_bp
gaaaaggcattaatagctgctcagctggacaatgccattgagaaggaattactggagaga
ctgaaacaagatacgtatggcgacatctacaacttccccattcatgccttcgacaaagcc
ctggaacaacaggaggcagagagtgactcttcagatactgaggaaaaagatgatgatgat
gatgatgaggaagatgtggggaaaagagaatttgtcgaagatggtgaggtagatgagagt
gacataagtgattttgaggatatggataaactggatgccagcagtgatgaagatcaggat
ggtaaatcctccagtgaggaggaggaagaaaaggcccttagtgcgaaacacaaaggcaaa
atgcccttgagaggaccactgcagagaaaacgagcctatgtggaaatagaatacgagcag
gagacagagcccgtggccaaagccaaaaccacgtga

>gi568815590r:33492016_33697515|GENSCAN_predicted_peptide_2|480_aa
MELDSALEAPSQEDSNLSEELSHSAFGQAFSKILHCLARPEARRGNVKDAVLKDLGDLIE
ATEFDRLFEGTGARLRGMPETLGQVAKALEKYAAPSKEEEGGGDGHSEAAEKAAQVGLLF
LKLLGKVETAKNSLVGPAWQTGLHHLAGPVYIFAITHSLEQPWTTPRSREVAREVLTSLL
QVTECGSVAGFLHGENEDEKGRLSVILGLLKPDLYKESWKNNPAIKHVFSWTLQQVTRPW
LSQHLERVLPASLVISDDYQTENKILGVHCLHHIVLNVPAADLLQYNRAQVLYHAISNHL
YTPEHHLIQAVLLCLLDLFPILEKTLHWKGDGARPTTHCDEVLRLILTHMEPEHRLLLRR
TYARNLPAFVNRLGILTVRHLKRLERVIIGYLEVYDGPEEEARLKILETLKLLMQHTWPR
VSCRLVVLLKALLKLICDVARDPNLTPESVKSALLQEATDCLILLDRCSQGRVKKSLVED

>gi568815590r:33492016_33697515|GENSCAN_predicted_CDS_2|1443_bp
atggagcttgacagcgctctggaagccccatcgcaggaagactctaatttgtccgaggag
ttgtctcactccgcctttggacaggccttctccaagattttacactgtcttgcccgcccg
gaggcacgacgaggcaatgtaaaagatgcagttcttaaagacctcggtgatctaatagaa
gccacagaatttgataggttatttgaggggactggtgcacggctccgcggaatgccggag
acactggggcaggtagcaaaagccctggagaagtatgcagccccctccaaggaggaggaa
ggtggaggtgatgggcactccgaagcggccgagaaagcagcccaagttgggttactgttt
cttaaactgttagggaaagttgagactgctaagaattccctggtcggccctgcatggcag
acgggcctgcatcacttggcaggacccgtttatatttttgccatcacacacagcttggag
caaccatggaccactccgagatctcgggaagttgctagggaggtgctcacctcactgctt
caagttactgaatgcggttctgtggcaggattcctacatggagaaaatgaagatgagaaa
gggagactttcggtgatactagggcttctcaaacccgacttgtataaggaatcctggaag
aataaccctgccatcaaacatgttttctcatggactctgcaacaggtcactcggccctgg
ctgagccagcatctggaaagggtacttcccgcatcattggtcatttcagatgactatcag
actgagaacaaaatcctgggtgtacactgtctccatcacattgtgcttaatgtgccagct
gctgatttgctccagtataacagagcccaggtcctataccatgccatttccaaccacctg
tacacaccagagcaccacctcattcaggctgtgctcctgtgtctgctggatttattcccc
atcctggagaaaaccctgcactggaaaggagatggagctcgacccaccacccattgtgat
gaggtcctgcggctgatcctgacccacatggagccagagcaccgccttcttttacgcagg
acctacgcaagaaacctgccggctttcgtgaacaggttggggatcctaactgtccggcac
ttaaagaggctggagagagtcatcattggttatctggaggtttatgatggacctgaggag
gaagctagactgaagatattggaaaccctaaaacttctcatgcaacatacttggcccaga
gtttcctgcagacttgtggtcttactgaaggccctcttgaaactgatttgtgatgtagca
agggatccaaaccttacacctgagtctgttaagagcgccctgctacaggaggccacagac
tgcctgattctcctggaccgctgttctcaaggacgggtaaagaaatctttagttgaagat
tga

>gi568815590r:33492016_33697515|GENSCAN_predicted_peptide_3|113_aa
MAANSSFLGGVHGLFLVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTV
ARVHIGQVKSICTKLQNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE

>gi568815590r:33492016_33697515|GENSCAN_predicted_CDS_3|342_bp
atggctgcaaacagcagctttcttggtggtgtacatggcctgtttcttgtatgggttgct
ctaagggtccttggagacaggcctttcaaatgtacgttcatgtctctgaccttgcactac
ccccgatgtaggctcgaaacaggcattcaaggtgcctttggaaagccccagggcactgtg
gccagggttcacattggccaagttaagtccatctgcaccaagctgcagaacaaggagcat
gtgattgaggcgccatgcagggccaagttcaagttccctggccaccagaagatccacatc
tccaagaagtggggctttaccaagttcaatgtggatgaatga

>gi568815590r:33492016_33697515|GENSCAN_predicted_peptide_4|202_aa
MGLRAVEQRVALVGEARAAQEPMEWVGGSGMAGCRSRALPCGKAAKARREIERSAGCFCG
LGLVSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSERYG
YKEVVLKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMC
NKPIASPSEATQNIGILLDELV

>gi568815590r:33492016_33697515|GENSCAN_predicted_CDS_4|609_bp
atgggactgcgcgccgtggagcagagggtggcgctcgtcggggaagctcgggccgcacag
gagcccatggagtgggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccc
tgtgggaaggcagccaaggcccggcgagaaatcgagcgcagcgccgggtgtttctgtggc
ctgggactggttagcaccaacaagtcctgctcgatgccacccatcagtttccaggacctt
ccgctcaacatctatatggtcatcttcggcacaggcatctttgtcttcatgctcagcctt
atcttctgctgctattttatcagcaaactgcggaaccaggcacagagtgagcgatacgga
tataaggaggtggtgcttaaaggtgatgccaagaagttacaattatatgggcagacctgc
gcagtctgtctggaagacttcaaggggaaggatgagttaggcgtgctcccgtgccaacac
gcctttcaccgcaagtgtctggtgaaatggctggaagttcgctgtgtctgccccatgtgt
aacaagcccattgctagtccctcagaggccacgcagaacattgggattctattggatgag
ctggtgtga

>gi568815590r:33492016_33697515|GENSCAN_predicted_peptide_5|544_aa
MEYYTAIKKNEILSFATTWMELEVIFGSPILWPQTSTSPWPVRNWAAQQEASAFLLSGIT
AAELEVEIVPGPSSSTLSQKSFPLENFPCQLHAAKTELTTGPSGYPGTNYPSGGITQALK
MEAAKAQGEIECSTGGPAQVEDPAHPPQLLAWVLSPLEPAASGAGRLLRAQTPETFLWTW
TSSLSQCQASPHRLRLKAHFGAKSASVDSQKASETAAATAAGASWPWRCLRRRSAFRTEA
QRSACKESQRAEQKELLQLEEKATPEGSCQSQAYLLSLENLLPKDQPREGKQLLWTHSSV
SHTPSSSSSSYLATEPIITTATPAAATVSATSKMCPGNWLWASMTFMARFSRSSSRSPVR
TRGTLEEMPTVQHPFLNVFELERLLYTGKTACNHADEVWPGLYLGDQDMANNRRELRRLG
ITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGK
ILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGIIPNRGFLRQLLALDRRLRQ
GLEA

>gi568815590r:33492016_33697515|GENSCAN_predicted_CDS_5|1635_bp
atggagtactatacagccattaaaaagaatgagattctgtcatttgccacaacatggatg
gaactggaagtcattttcgggtccccaatcctctggccacagaccagtaccagtccatgg
ccagttaggaactgggctgcacagcaggaggcttctgcctttttgctctcaggaattacc
gctgctgaactggaagtagagattgtccctggcccttcctcatcaacattatctcagaag
tccttccctcttgaaaactttccatgccagcttcatgctgccaagactgaattaactacc
ggaccttcaggataccctgggaccaactatccctctgggggcattacccaggctcttaaa
atggaggcagctaaggcccagggagaaattgagtgcagcaccggtgggccagcacaggtg
gaagacccggcacaccctccgcagctgctggcctgggtgctaagcccgttagagcccgcg
gccagcggggctggtcggctgctccgagctcagactccagaaacattcttatggacttgg
acatcaagcctatcccagtgccaggccagccctcacagactaaggctcaaggcccacttt
ggtgccaagtcagcttctgtggactcacagaaggcttcagaaacagcggcggcgacagca
gcaggagcgtcatggccgtggcgctgtctgcgccggcgatccgcctttcggactgaggcc
cagcgcagcgcttgcaaagagagccaaagagctgagcaaaaggagctgctgcagcttgaa
gaaaaagccacccctgaaggctcctgccagagccaggcttaccttctctccctcgagaat
cttctcccgaaggaccagcccagggaagggaagcagctgctctggactcactcaagtgtg
tctcacaccccttcctcttccagcagcagctacctggcaactgaacccatcatcaccaca
gccactcctgcagctgccacggtttctgccacctctaagatgtgccctggtaactggctt
tgggcttctatgacttttatggcccgcttctcccggagtagctcaaggtctcctgttcga
actcgagggaccctggaggagatgccaaccgttcaacatcctttcctcaatgtcttcgag
ttggagcggctcctctacacaggcaagacagcctgtaaccatgccgacgaggtctggcca
ggcctctatctcggagaccaggacatggctaacaaccgccgggagcttcgccgcctgggc
atcacgcacgtcctcaatgcctcacacagccggtggcgaggcacgcccgaggcctatgag
gggctgggcatccgctacctgggtgttgaggcccacgactcgccagcctttgacatgagc
atccacttccagacggctgccgacttcatccaccgggcgctgagccagccaggagggaag
atcctggtgcattgtgctgtgggcgtgagccgatccgccaccctggtactggcctacctc
atgctgtaccaccaccttaccctcgtggaggccatcaagaaagtcaaagaccaccgaggc
atcatccccaaccggggcttcctgaggcagctcctggccctggaccgcaggctgcggcag
ggtctggaagcatga