GENSCAN 1.0 Date run: 5-Nov-116 Time: 04:21:02 Sequence gi568815590r:118824377_119033301 : 208925 bp : 37.60% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Init + 12453 12615 163 2 1 72 81 110 0.728 8.64 1.02 Term + 14579 14784 206 0 2 51 42 98 0.262 -1.95 1.03 PlyA + 15083 15088 6 1.05 2.00 Prom + 16229 16268 40 -4.55 2.01 Init + 16283 16466 184 1 1 86 28 126 0.064 5.73 2.02 Intr + 22036 22252 217 2 1 73 37 89 0.062 -1.06 2.03 Intr + 23684 23829 146 2 2 16 64 147 0.162 4.11 2.04 Intr + 33840 33897 58 1 1 88 97 63 0.043 4.22 2.05 Intr + 49351 49601 251 1 2 50 81 132 0.020 4.86 2.06 Term + 50934 51001 68 1 2 84 39 103 0.929 2.12 2.07 PlyA + 51101 51106 6 1.05 3.09 PlyA - 52542 52537 6 1.05 3.08 Term - 57271 57128 144 1 0 46 36 94 0.076 -3.07 3.07 Intr - 68872 68687 186 1 0 73 91 134 0.953 11.16 3.06 Intr - 75134 75049 86 0 2 63 92 -8 0.027 -4.28 3.05 Intr - 81184 81017 168 2 0 6 92 114 0.025 2.60 3.04 Intr - 100386 100036 351 1 0 76 59 263 0.492 16.57 3.03 Intr - 102342 102118 225 1 0 61 86 143 0.989 8.43 3.02 Intr - 108924 108555 370 0 1 112 92 252 0.971 21.75 3.01 Init - 115833 115792 42 0 0 14 70 69 0.220 -3.76 3.00 Prom - 117315 117276 40 -4.65 4.00 Prom + 118219 118258 40 -5.35 4.01 Init + 122868 123073 206 2 2 54 26 232 0.453 11.97 4.02 Intr + 127623 127710 88 0 1 109 59 59 0.083 4.15 4.03 Term + 128230 128361 132 0 0 33 43 109 0.064 -1.99 4.04 PlyA + 128873 128878 6 1.05 5.07 PlyA - 129505 129500 6 -0.45 5.06 Term - 129768 129718 51 0 0 109 42 57 0.029 -0.35 5.05 Intr - 134201 134106 96 2 0 61 108 65 0.063 5.09 5.04 Intr - 134941 134855 87 1 0 101 28 74 0.052 1.95 5.03 Intr - 155631 155519 113 1 2 77 84 146 0.186 12.28 5.02 Intr - 167371 167219 153 2 0 90 101 17 0.050 2.32 5.01 Init - 182363 182156 208 2 1 60 87 81 0.216 4.23 5.00 Prom - 192138 192099 40 -3.05 6.03 PlyA - 195945 195940 6 1.05 6.02 Term - 197150 196981 170 0 2 91 54 72 0.420 1.16 6.01 Intr - 200980 200912 69 2 0 71 115 21 0.327 1.34 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Init + 49355 49601 247 1 1 85 81 125 0.954 9.30 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_1|122_aa MEEFEPIPAQNLSSGCTALHLHQPAVESPEKPGKTTKKCTYRAFQRAEDKRGREDPISKY SYIVGIQVISGRHNLTNNILPLLMSILSESVTKAYVVIVCGGGSGSIKKELERLEMKGGE EK >gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_1|369_bp atggaggaatttgaacccatacctgcccaaaacctaagttcaggctgtacagctctccac ctgcatcaacctgcggtagaaagtccagagaagcctggcaaaacaactaaaaaatgcacc tatcgagcatttcaaagagcagaagataagagaggcagagaagatcctatctccaaatac agttacattgtaggcattcaggttatttcggggagacacaatttaaccaataatatcctc cctttgctaatgagcatcctttctgaatcagttactaaggcttatgtggtgattgtgtgt ggaggcggaagtgggagtataaagaaagagctggagagactagagatgaagggaggagag gagaaatga >gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_2|307_aa MMSRDVKESHVKSMERGPGTDPPGTSYIVAGERDREWGLCVPTHISYQIVIPTCCGKDLV VGFGQMPASISCCGPFHREAHIRTVGSVRTSEEKIEERKTETETRQPASLFVTSLGSDIT SCCPYFICEKPSLSVFDEVAAIEVAVETVHGPQSQNYLLSDPLRKMFAKPENLSQNETAS LGRGFEQKGEGGMTENMSWFHSKMDVTGGHYPKWINTETESQIPHALTFKWELNIGTHGH KNDNNRHGTARGEGEEQALKKITIEYYAHSLGDRINRTTNLSTYPAYSTYKDDEDEDLYD NPPTLNA >gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_2|924_bp atgatgtcaagagatgtaaaagagagccatgtaaaatccatggagagaggacctgggaca gatcctccaggcacatcttacatagtggcaggagagagagaccgagagtgggggctctgt gtccctactcacatctcataccaaattgtgatccccacatgttgtgggaaggatctggtg gtaggttttggccagatgccggcctcaatttcatgctgtggacctttccacagggaagct cacatcaggacagttggctccgtcagaacaagtgaggaaaaaatagaagagagaaagaca gagacagagacaagacagccagcaagtctttttgtaaccagtcttggaagtgacatcacg tcatgttgtccctattttatttgtgaaaagccatcactaagtgtttttgatgaagtagca gcaatagaagttgcagtggagactgtccatggcccacaaagtcaaaactatttgctatct gaccctttacgaaaaatgtttgccaaacctgaaaatctttctcaaaatgagacggcatcc ttggggagaggttttgagcaaaaaggagaaggaggaatgactgagaacatgagctggttt catagcaagatggatgtaactggaggccattatcctaagtggattaacacagaaacagaa agccaaataccacatgctctcacttttaaatgggagctaaacatcggtactcatggacat aaaaatgacaacaatagacatggcactgctagaggggagggagaggagcaagcattgaaa aaaataactattgagtactatgctcactccctgggtgacaggatcaatcgtaccacaaat ctcagcacatacccagcctactcaacttataaagatgatgaggatgaagacctttatgat aatccacctacacttaatgcatag >gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_3|523_aa MLSLPAPPTPRQALFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTA KWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIE FCLKHRSCPPGFGVVQADVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNAESVERI KRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTFEQLRSLME SLPGKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALKHSKTYHFPKT VTQSLKKTIRFLHSFTMYKLYQKLFLEMIADPKYCSSKYFSVAAQVVLEAALKKDEAERL GYSLNNSREEIPCSSWVAPRSQCKKRCAPDRFLKGRDILFSTLISNLRPAACHIVHPLGV PALSRWGHQGSSSRRAHDFLHHETVTKSLASHRLGKSSFKCRTHSHGFPFPSAPYQLLAK ALRNSDGFLPAQIKKFAIYKTVVFLSRESHLRTSPELNLSVIK >gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_3|1572_bp atgctatccctccctgctccccccaccccacgacaggccctgtttctggacatctccatt aagtggaccacccaggaaacgtttcctccaaagtaccttcattatgacgaagaaacctct catcagctgttgtgtgacaaatgtcctcctggtacctacctaaaacaacactgtacagca aagtggaagaccgtgtgcgccccttgccctgaccactactacacagacagctggcacacc agtgacgagtgtctatactgcagccccgtgtgcaaggagctgcagtacgtcaagcaggag tgcaatcgcacccacaaccgcgtgtgcgaatgcaaggaagggcgctaccttgagatagag ttctgcttgaaacataggagctgccctcctggatttggagtggtgcaagctgatgttacc ctgtgtgaggaggcattcttcaggtttgctgttcctacaaagtttacgcctaactggctt agtgtcttggtagacaatttgcctggcaccaaagtaaacgcagagagtgtagagaggata aaacggcaacacagctcacaagaacagactttccagctgctgaagttatggaaacatcaa aacaaagaccaagatatagtcaagaagatcatccaagatattgacctctgtgaaaacagc gtgcagcggcacattggacatgctaacctcaccttcgagcagcttcgtagcttgatggaa agcttaccgggaaagaaagtgggagcagaagacattgaaaaaacaataaaggcatgcaaa cccagtgaccagatcctgaagctgctcagtttgtggcgaataaaaaatggcgaccaagac accttgaagggcctaatgcacgcactaaagcactcaaagacgtaccactttcccaaaact gtcactcagagtctaaagaagaccatcaggttccttcacagcttcacaatgtacaaattg tatcagaagttatttttagaaatgatagctgatccaaaatactgcagcagcaaatacttt tctgtggctgctcaggtagtgttagaggcggcattaaaaaaagatgaagctgaacgtttg ggctattccttaaacaactccagagaggaaattccttgctcatcctgggtagcacccagg tcacaatgcaagaaacggtgtgccccagatagattcctcaaaggcagggatattctcttc agtactctaatctcaaaccttagaccagctgcctgccacatagttcatccccttggagta ccagccttaagtcggtggggtcaccagggctcttcttctcggagggcccatgacttcctc caccatgaaactgtcacaaaatccttagcatctcatcgcttaggcaaaagcagcttcaaa tgccggactcatagtcatggatttccattcccctctgctccctaccagcttttagcaaag gcactgcgaaattcagatggctttctgccagcgcaaataaagaagtttgctatttataaa actgttgtgttcttgagcagggaaagccatctgagaacatctccagaattaaatttgtct gtaattaaataa >gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_4|141_aa MEIASGSKLNSVGTSMEIASRRSNTLANLFIAPLTQETHLIVMHYGDLGATNEQDENLRL QRAHTLPQRKLGRERSGGVQKAPGLTLSGLGRKGSPRELEPERICRVKIGLPGAGITLRS TVPFTNPTIIKGLLVSELPTR >gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_4|426_bp atggaaattgccagtggcagtaagctaaattctgttggaacatccatggaaattgccagt agacgatccaacaccctagcaaatctctttatagctcctttaactcaggaaacacacctt attgtcatgcattatggagatcttggggctacaaatgaacaagatgaaaatctgcgcttg caaagagcccatactttgccacagaggaagcttgggcgggagcggtcggggggtgtgcag aaagctccagggttaacgctttcagggctggggcggaaaggatcccccagggagttagag ccagagagaatctgcagagtgaaaattggactgcctggggcagggataaccttgcggagc actgttcccttcaccaaccccaccatcatcaaagggctattggtatcggagcttcctacg cgctga >gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_5|235_aa MGKDDDRQYPCSRNIQGISGWRHLGQMKILGKDPDRAQDPERTWHLQRPILITPTAIGTI PCVSPFVKCSILATQTQDTELGHTRKSRSRRYSCLCLPRVYVQVEKQKIRVRKVFKTMYY DYSHRGSKLPSSEQPYERQETETISPTTHEEQKSANTHSTKAPNDLTTFATELPDLHPML SKPYLTLKTHSVHEFESFSREAFSCRGGIPAIHLQELEQGEPEFELKASANTIEK >gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_5|708_bp atgggtaaagatgatgataggcaatatccatgcagtaggaatatccagggaatatctgga tggaggcatttgggacagatgaaaatcctgggcaaagatccagacagggcccaggatcca gaaagaacatggcatttacagagaccaatattaattacaccaacagctattgggaccata ccatgtgtcagcccctttgttaagtgctcaatattagccacacagactcaggatactgaa ttgggccacacaagaaaatccagaagtagaagatacagttgcctctgtcttcccagagtt tatgttcaagtggaaaagcaaaagataagggtacgaaaagttttcaaaacaatgtattat gattactcacaccggggaagcaagctgccaagttctgagcagccttatgaaagacaagaa actgagaccatcagtccaacaacccatgaggaacagaagtctgccaacactcattctaca aaggccccaaatgacttgaccacatttgctactgaacttccagatcttcatcctatgctc tctaagccttatctgacactgaagacccatagtgttcatgaatttgaaagcttcagccgt gaggctttttcttgccgaggaggcattcctgccatacacttacaggagttagaacaagga gagccagaatttgagctaaaagcttcagcgaataccatagaaaaataa >gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_6|79_aa XECSTKRYVIEAIAAKALKNNLCESLWPLPAPAVVIPASSYCTDCRGHAFSAPKLHETVP VLGIIVAVVHLQGVKFYDE >gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_6|240_bp ncagagtgcagtaccaagcgttatgtaatagaggcaatagcagctaaggctttaaaaaat aatctctgcgaaagcctttggcctctaccagctccagcagtagtaattcctgccagctcc tactgcactgattgtagaggacatgcattctctgctcctaaactgcatgagacagtccct gtcttgggcataattgttgctgtagttcatctgcagggagtcaagttctatgatgaatga