GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:51:24

Sequence gi568815590r:109868091_110074388 : 206298 bp : 36.22% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    161    156    6                               1.05
 1.05 Term -   2554   2423  132  1  0   78   51    48 0.021  -2.79
 1.04 Intr -  15459  15247  213  0  0   61   85   108 0.417   5.79
 1.03 Intr -  17016  16850  167  1  2   82   60    91 0.344   4.46
 1.02 Intr -  25190  25053  138  0  0   78   10   122 0.217   2.91
 1.01 Init -  25403  25328   76  2  1   69   44    28 0.524  -2.20
 1.00 Prom -  29513  29474   40                              -4.35

 2.04 PlyA -  30535  30530    6                               1.05
 2.03 Term -  31353  31228  126  0  0   19   55   137 0.652   0.80
 2.02 Intr -  31481  31380  102  2  0  111   96    86 0.726  11.15
 2.01 Init -  55371  55366    6  0  0   80   90     0 0.082   0.43
 2.00 Prom -  64435  64396   40                              -2.95

 3.07 PlyA -  64480  64475    6                               1.05
 3.06 Term -  71869  71574  296  2  2   79   44   181 0.987   7.28
 3.05 Intr -  73154  73005  150  0  0  -16   89   163 0.960   5.21
 3.04 Intr -  73527  73320  208  0  1   -6  108   173 0.849   7.63
 3.03 Intr -  74165  73909  257  0  2   14   98   237 0.868  13.54
 3.02 Intr -  74452  74310  143  0  2   55   42    70 0.875  -1.82
 3.01 Init -  76172  75916  257  2  2   24   39   204 0.407   5.85
 3.00 Prom -  76449  76410   40                              -9.35

 4.00 Prom +  77787  77826   40                              -7.05
 4.01 Sngl +  78531  79121  591  2  0   88   38   316 0.639  22.54
 4.02 PlyA +  80604  80609    6                               1.05

 5.07 PlyA -  81391  81386    6                               1.05
 5.06 Term -  94988  94831  158  0  2   93   41   121 0.378   5.01
 5.05 Intr - 100509 100036  474  1  0  104   18   342 0.214  20.91
 5.04 Intr - 101022 100992   31  0  1   80  100    20 0.243  -0.81
 5.03 Intr - 104697 104127  571  2  1   57   77   579 0.262  45.53
 5.02 Intr - 106477 105838  640  2  1   67   80   803 0.115  67.59
 5.01 Init - 134767 134551  217  1  1   65   77    94 0.313   4.90
 5.00 Prom - 140058 140019   40                              -5.35

 6.00 Prom + 147611 147650   40                              -5.45
 6.01 Init + 150473 150599  127  1  1   89  113    90 0.835  11.98
 6.02 Intr + 162364 162498  135  2  0   31   85    65 0.103   0.12
 6.03 Intr + 171464 171574  111  0  0   69   94    39 0.349   2.03
 6.04 Intr + 182587 182682   96  2  0   62   98   121 0.714   9.56
 6.05 Term + 193886 194589  704  0  2   54   44   285 0.007  13.40
 6.06 PlyA + 196007 196012    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:109868091_110074388|GENSCAN_predicted_peptide_1|241_aa
MENSEQGLKGLVKLPKAAKEEESTLRPQGTIEGSEVAGEMSQVCILDCQLWYECGNWISK
GKIWLQEEKWKGIIKVIDLKIRKFSWITPVCPISSIEPFKAEENFQQESGERCHRRGKQN
KDNEEGEGKICDETSVMRATEMYMESRQKPWGIQVESTTKEGIKRKVNSRGLDKEVKTWG
KAKTLTVGGARSLARSFLTLKPARQYSANLFDDLPQLARIISKFFSSHETSKCNPHSWRR
R

>gi568815590r:109868091_110074388|GENSCAN_predicted_CDS_1|726_bp
atggagaatagtgagcaaggtctcaaaggattggtaaaacttccaaaggcagcaaaagaa
gaggaaagcactttaagaccacagggaaccatagaaggctctgaagtagcaggtgaaatg
agtcaggtttgtattttagattgccagctctggtatgagtgtggaaattggatcagcaag
ggaaaaatctggcttcaagaagagaaatggaaaggtataattaaggttatagaccttaag
ataaggaaattttcctggattaccccggtgtgccctatatcatcaattgagccctttaaa
gctgaggaaaatttccagcaagaatcaggagagagatgccacagaagaggaaagcagaat
aaagataatgaagaaggggaggggaagatatgtgatgagacaagcgtaatgagagctaca
gagatgtacatggagtcaagacagaagccatggggaattcaggttgagtctacaactaaa
gaaggaatcaaaagaaaggttaattccagagggctggataaagaggtaaaaacctggggg
aaagcaaagaccctaacagtaggtggtgcaagaagcttagcaaggagtttcctgactctc
aaacctgcacggcaatattctgctaatctgtttgatgatctgccacaattggcaagaatt
atttcaaaatttttctcctctcatgaaacctccaagtgtaacccacactcatggcgcaga
agatga

>gi568815590r:109868091_110074388|GENSCAN_predicted_peptide_2|77_aa
MQMIQKIKLPHQENKTNVVVGTITGDLQVQEVPKLRPGHNHILKATDKIFTLEQLALDSP
TGCSTILFSDPYKGLEV

>gi568815590r:109868091_110074388|GENSCAN_predicted_CDS_2|234_bp
atgcagatgatccaaaagataaaacttcctcaccaggaaaacaaaacaaatgtggttgtg
ggaaccataacaggtgacctgcaggtccaggaggtgcccaaactgaggccaggccacaac
cacatcctcaaggctacagacaagatcttcaccttggaacagctggccctagactccccg
actggctgtagcaccatcttgttctctgatccttacaagggcctagaggtgtga

>gi568815590r:109868091_110074388|GENSCAN_predicted_peptide_3|436_aa
MWRTKEYNVAGWLLLSSVNKVMKENDELEDSVLQLQKQILSLKSAKTALRVLSPVEKELK
LWKDRLKLLLCEWLTSNERCTHGLARSPIWPVQKTDGSCRMTVDYCKLNQLVTPIAVAVP
DVVSLLEPINTSPALCHDLIRKDLDRFSLLQDITLVHYIDDIKLIGSSEQEVANTLDLLV
RYLHTRGQAINLTEIQGPSTSLQFPGVRWCGTCQDIPSKRQLLACYWALVETERLTMDYQ
VTMTAELPIMNWVLSDPSNHKVGRAQLHFIIKWKWYIHDWAQAGPEGTRGTTRKWTAAAL
QPLSRTSLKDSGEGKSSQWAELRAMHLAVHFAWKEKWPARINRSRNQGVEVKVAPLTITP
TDPLAKFLLPVPATLFSTDLEVLVPEEGMLPPGDTTMIPLNWKLALPPGHFGLLLPLSQQ
AKKGVTVLAGVIDPDC

>gi568815590r:109868091_110074388|GENSCAN_predicted_CDS_3|1311_bp
atgtggagaaccaaggaatataatgtagctggttggttgctcctaagttcagtgaacaaa
gtgatgaaagaaaatgatgaacttgaggattctgtcctccagcttcaaaagcagatactg
agcctcaaatctgctaagactgccctgagagtcttatcgcctgtagagaaagagctgaaa
ttgtggaaagacagactcaagctcttattatgcgagtggctgaccagcaacgaaagatgc
acgcatggccttgccaggtctcccatttggcctgtgcagaagacagatggatcttgcaga
atgacagtggattattgtaagcttaaccaattggtgactccaattgcagttgctgtacca
gatgtggtttcactgcttgaaccaattaacacatctcctgctttgtgtcatgatcttatt
cggaaagaccttgatcgcttttcacttctgcaagatatcacactggtccattacattgat
gacattaagctgattggatccagtgagcaagaagtagcaaacacactggacttattggtg
agatatttgcataccagaggacaggcaataaatctgactgaaattcagggaccttctacc
tcattacaatttccaggagtccggtggtgtgggacctgtcaagatattccttctaagaga
cagctcttggcctgttactgggctttggtggaaactgaacgtttgactatggattatcaa
gtcaccatgacagctgaactgcctatcatgaactgggtgctttctgacccatctaaccat
aaagttggtcgtgcacagctgcatttcatcatcaaatggaagtggtatatacatgattgg
gctcaagcaggtcctgaaggcacaagaggcaccacccgaaagtggacagctgcagcacta
cagcccctttctagaacatcactaaaggacagcggtgaagggaaatcttcccagtgggca
gaacttcgagccatgcacctggctgtgcactttgcatggaaggagaaatggccagccagg
attaataggtctaggaatcaaggggtggaagtgaaagtggcaccactcaccatcacccct
actgacccactagcaaaatttttgcttcctgttcctgcaacattattttctactgaccta
gaagtcttagttccagaggaaggaatgctgccaccaggggacacaacaatgattccatta
aactggaagttagcattgccacctggacactttgggctcctcctacctttaagtcaacag
gctaagaagggagttacagtgttggctggggtgattgacccagactgttaa

>gi568815590r:109868091_110074388|GENSCAN_predicted_peptide_4|196_aa
MAERSQCRAQAMASENESPKPQQLSCGLEPVGPRKSRIEVWEPPPRFQKMYGSAWMPKEK
LAAGVGPSWRTSARAVQKGNVGLETPHRVRTGALPSGAVRRRSASSRLQNGGSTDSLHHV
PGKATNTQCHTMKAAGREAVPCKATGVELPKIMGNYVLHQCDLNVRPGVKGDHFGALKFD
CPTGFQTCMGPVTPLF

>gi568815590r:109868091_110074388|GENSCAN_predicted_CDS_4|591_bp
atggctgaaaggagccaatgtagagctcaggctatggcttcagagaatgaaagccccaag
cctcagcagctttcatgtggtcttgagcctgtgggtccacggaagtcaagaattgaggtt
tgggaacctccacctagatttcagaagatgtatggaagtgcatggatgcccaaggaaaag
ttagctgcaggggtggggccctcatggagaacctcggctagggcagtacagaagggaaat
gtggggttggagaccccacacagagtccgtactggagcactgcctagtggagctgtgaga
agaaggtcagcatcctccagactccagaatggtggatccaccgacagcttgcaccatgtg
cctggaaaagctacaaacactcaatgccataccatgaaagcagctgggagggaggctgta
ccctgcaaagccacaggggtggagctgcccaagatcatgggaaactatgtcttgcatcag
tgtgacctgaacgtgagacctggagtcaaaggagatcattttggagctttaaaatttgac
tgccccactggatttcagacttgcatggggcctgtaacccctttgttttag

>gi568815590r:109868091_110074388|GENSCAN_predicted_peptide_5|696_aa
MEDYAAIKRNKFLSFATTWMELVVIMLGEISQAQKDKLHMFSYLWVLTIKTIELVEIESG
RMVTSSWEDEWYAAGGGRRTAGGEGAPRRGNPFGSPGNPGRHQGPCHRPRGTKASGVSPT
LWRPQAAATGLEMPSSGRALLDSPLDSGSLTSLDSSVFCSEGEGEPLALGDCFTVNVGGS
RFVLSQQALSCFPHTRLGKLAVVVASYRRPGALAAVPSPLELCDDANPVDNEYFFDRSSQ
AFRYVLHYYRTGRLHVMEQLCALSFLQEIQYWGIDELSIDSCCRDRYFRRKELSETLDFK
KDTEDQESQHESEQDFSQGPCPTVRQKLWNILEKPGSSTAARIFGVISIIFVVVSIINMA
LMSAELSWLDLQLLEILEYVCISWFTGEFVLRFLCVRDRCRFLRKVPNIIDLLAILPFYI
TLLVESLSGSQTTQELENVGRIVQVLRLLRALRMLKLGRHSTGIHISLMPFNLPLHVPDC
LKLYKEGLRSLGMTITQCYEEVGLLLLFLSVGISIFSTVEYFAEQSIPDTTFTSVPCAWW
WATTSMTTVGYGDIRPDTTTGKIVAFMCILSGILVLALPIAIINDRFSACYFTLKLKEAA
VRQREALKKLTKNIATDSYISVNLRDVYARSIMEMLRLKGRERAKQIMPYKEKHNACRLL
SLYIHAYNPKWVLKASRQSHTAIPESIHYPETSKNL

>gi568815590r:109868091_110074388|GENSCAN_predicted_CDS_5|2091_bp
atggaggactatgcagccataaaaaggaataagttcctatcatttgcaacaacatggatg
gaactggtggtcattatgttaggtgaaataagtcaggcacagaaagacaaacttcacatg
ttctcttatttgtgggtgttaacaatcaaaacaattgaactcgtggagatagagagtgga
aggatggttaccagcagctgggaagatgagtggtatgcggcaggaggaggaaggcgcaca
gcgggtggagagggtgcgccaaggagaggtaaccccttcgggagcccggggaatcccggc
cgccaccaggggccgtgccaccgccctcgcgggaccaaagcttccggcgtgtccccaact
ttgtggcgccctcaggccgcggcgactgggttagagatgccttccagcggcagagcgctg
ctggactcgccgctggacagcggctccctgacctccctggactctagtgtcttctgcagc
gagggtgaaggggagcccttggcgctcggggactgcttcacggtcaacgtgggcggcagc
cgcttcgtgctctcgcagcaggcgctgtcctgcttcccgcacacgcgccttggcaagctg
gccgtggtggtggcttcctaccgccgccccggggccctggccgccgtgcccagccctctg
gagctttgcgacgatgccaaccccgtggacaacgagtacttcttcgaccgcagctcgcag
gcgttccgatatgtcctgcactactaccgcaccggccgcctgcatgtcatggagcagctg
tgcgcgctctccttcctgcaggagatccagtactggggcatcgatgagctcagcatcgat
tcctgctgcagggacagatacttcagaaggaaagagctgagtgaaactttagacttcaag
aaggacacagaagaccaggaaagtcaacatgagagtgaacaggacttctcccaaggacct
tgtcccactgttcgccagaagctctggaatatcctggagaaacctggatcttccacagct
gcccgtatctttggcgtcatctccattatcttcgtggtggtgtccatcattaacatggcc
ctgatgtcagctgagttaagctggctggacctgcagctgctggaaatcctggagtatgtg
tgcattagctggttcaccggggagtttgtcctccgcttcctgtgtgtgcgggacaggtgt
cgcttcctaagaaaggtgccaaacatcatagacctccttgccatcttgcccttctacatc
actcttctggtagagagcctaagtgggagccagaccacgcaggagctggagaacgtgggg
cgcattgtccaggtgttgaggctgctcagggctctgcgcatgctaaagctgggcagacat
tccacaggtattcacatttcactgatgccttttaatttgccattgcatgttcctgattgt
cttaaactttacaaggaaggattacgctcccttgggatgacaatcacccagtgttacgaa
gaagtcggcctactgctcctatttctatccgtgggaatctctatattttcaactgtagaa
tactttgctgagcaaagcattcctgacacaaccttcacaagtgtcccttgtgcatggtgg
tgggccaccacctctatgactactgtgggatatggggacattagaccagacaccaccaca
ggcaaaatcgtggccttcatgtgtatattatcgggaattcttgtcttggccttgcctatt
gctattattaacgatcgcttctctgcttgctacttcaccttgaaactcaaggaagcagct
gttagacagcgtgaagccctaaagaagcttaccaagaatatagccactgactcatatatc
agtgttaacttgagagatgtctatgcccggagtatcatggagatgctgcgactgaaaggc
agagaaagagcaaagcagatcatgccctacaaagaaaaacacaatgcctgcagactgctc
tcactttacattcatgcctacaaccccaaatgggttcttaaagcttccaggcaatctcat
acggcaattcctgagtccattcactatccggagacaagtaaaaacctctaa

>gi568815590r:109868091_110074388|GENSCAN_predicted_peptide_6|390_aa
MALVMAVEVVGTSWDLPVAYMGTVVAAVDLEGQFPGLQVAHEALAYSNASAFRRLNLYYW
FASALSFVDWPFKTISLSEEIWKRGKRVCEAGKFKIKAPLDSMSDEGLLVHRCCILAVSS
HSARGKETCVWHSGNNEVEGYGLMDDENEMFGGQERAYTPLECILNHWDCFDPQNLEEKH
LIALCTNIWPNYDLQQGSTWPQEETIHFDTIQQLERFCRREDRWSEAPYVQTFYTLPGNL
DICQQCRIDPVLLFDISGKAARGKSRELKIWIPEAPPAEELAPSSPAPLGPPPSPYPASA
SHLSPPRNPHPKQVPVSLLPLQQMPSEFGASKVRVPFSLQDLKQIKGDLGKFSDDSDRYV
ETVQNFTQIFELSWRDIMLVLNQTLKNTEK

>gi568815590r:109868091_110074388|GENSCAN_predicted_CDS_6|1173_bp
atggcattggtgatggcagtagaagtagtgggtacatcttgggaccttcctgtggcatac
atgggcacagtagtggcagcagtggacttggaaggccagttcccaggcctccaggtggca
catgaagctttggcttactcaaatgcatctgcatttcgacgtctaaatctgtattactgg
tttgcctctgctctctcctttgtggattggccttttaaaacaatttccctttctgaggag
atttggaaaagaggaaaaagagtttgtgaggctgggaaattcaagatcaaggccccatta
gattcaatgtctgatgagggtttgctggttcatagatgttgtattcttgctgtgtcctcc
catagtgcaagagggaaagaaacttgtgtatggcacagtggaaacaatgaagttgaaggg
tacggcttaatggatgatgaaaatgagatgttcgggggacaagagagggcttatactcct
ctggagtgtatcctgaaccattgggactgctttgaccctcagaatctggaggaaaaacac
ctcatagccctatgcacaaatatttggccaaattatgatttacagcaaggatcgacttgg
cctcaggaagaaaccattcattttgataccatccagcagttggaacgtttctgtagacgt
gaggacagatggtctgaggccccgtacgtgcagactttctatacattgccaggcaatcta
gatatctgccaacaatgtaggattgatccagtgctcctgtttgacatctcagggaaggct
gcaaggggcaaatccagggaattaaagatatggatcccagaggcacccccagcagaggag
ctagctccctcaagccctgctcctctgggcccacccccatctccctatccagcttcagcc
tctcacttgtcccctcctagaaatcctcaccctaaacaagtcccagtctcactcttgccc
cttcaacaaatgcccagtgaatttggagccagtaaggtccgggtgcccttctccctacag
gacttaaagcaaattaagggggatcttggcaagttttcagatgactctgacagatatgta
gagactgtccagaatttcacccaaatatttgaactctcctggagagacattatgttagtt
ttgaatcagaccctgaagaacactgagaaatga