GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:15:22

Sequence gi568815590f:18300004_18500873 : 200870 bp : 39.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   8122   8325  204  0  0   66   45   157 0.465   4.14
 1.02 PlyA +  10067  10072    6                               1.05

 2.03 PlyA -  11336  11331    6                               1.05
 2.02 Term -  12986  12898   89  0  2  120   53    80 0.696   4.54
 2.01 Init -  17741  17639  103  2  1   34   77   130 0.539   6.95
 2.00 Prom -  20541  20502   40                              -5.95

 3.00 Prom +  21090  21129   40                              -4.25
 3.01 Init +  30296  30420  125  1  2   56   49    89 0.214   1.49
 3.02 Intr +  32707  32774   68  1  2   59   93    86 0.224   3.83
 3.03 Intr +  42999  43125  127  1  1   14   47   117 0.081  -0.98
 3.04 Intr +  47821  48001  181  1  1   43   91    91 0.142   3.85
 3.05 Intr +  52866  53020  155  2  2   26   55    99 0.095  -1.65
 3.06 Intr +  59934  60030   97  0  1  123   67    49 0.278   5.39
 3.07 Term +  70940  71224  285  1  0  106   48   156 0.061   7.82
 3.08 PlyA +  71494  71499    6                               1.05

 4.02 PlyA -  71515  71510    6                               1.05
 4.01 Sngl -  83774  83382  393  2  0   36   41   431 0.990  29.19
 4.00 Prom -  84085  84046   40                              -8.95

 5.00 Prom +  84416  84455   40                              -8.25
 5.01 Init +  85578  85788  211  2  1   91   40   116 0.590   6.09
 5.02 Intr +  86250  86599  350  1  2   61   81    95 0.197   0.25
 5.03 Intr +  87198  87584  387  2  0   62   43   249 0.441  11.86
 5.04 Intr +  95970  95981   12  2  0  114  121     5 0.181   0.46
 5.05 Intr +  98300  98326   27  1  0   77  115    19 0.203   0.89
 5.06 Term +  99995 100873  879  1  0   79   39   506 0.314  36.35
 5.07 PlyA + 100886 100891    6                               1.05

 6.03 PlyA - 101024 101019    6                               1.05
 6.02 Term - 109568 109394  175  1  1  126   42    97 0.259   5.15
 6.01 Init - 122884 122736  149  1  2   42   30   148 0.019   4.01
 6.00 Prom - 139273 139234   40                              -4.85

 7.00 Prom + 149079 149118   40                              -5.75
 7.01 Init + 150006 150114  109  2  1   90  110    80 0.873  10.83
 7.02 Term + 150930 151207  278  1  2  -23   39   195 0.450  -1.86
 7.03 PlyA + 153622 153627    6                               1.05

 8.00 Prom + 157568 157607   40                              -3.65
 8.01 Sngl + 167920 168222  303  0  0   83   54   247 0.888  16.38
 8.02 PlyA + 168807 168812    6                               1.05

 9.00 Prom + 172579 172618   40                              -3.95
 9.01 Sngl + 176518 176724  207  0  0   61   48   202 0.566   8.44
 9.02 PlyA + 177165 177170    6                               1.05

10.02 PlyA - 179084 179079    6                               1.05
10.01 Sngl - 186356 185931  426  2  0   67   52   306 0.673  20.94
10.00 Prom - 193031 192992   40                              -3.45

11.02 PlyA - 193196 193191    6                               1.05
11.01 Term - 198997 198890  108  1  0   87   54   145 0.953   8.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 136449 136511   63  2  0   69   93    67 0.876   6.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_1|67_aa
MLKIANHQENANQHHNITSHPLGWLLPKTNNNNKKITSIGIGKNVEKLEPLCIPDGNAKR
YSHYGKQ

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_1|204_bp
atgctcaaaattgccaatcaccaggaaaacgcaaatcaacaccacaatatcacctcacac
ccattaggatggctactaccgaaaacaaacaacaacaacaagaaaataacaagcattggc
attggcaagaatgtggagaaactggaacccttgtgcattcctgatgggaatgcaaaacgg
tacagtcactacggaaaacagtag

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_2|63_aa
MGSCWKTAVPNVGTALEHHPPFTPFGMGISAGENASSAQRRGDVNTSESEMTAVYRPREE
PSE

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_2|192_bp
atggggagctgttggaagacagctgttcccaatgtggggacagctcttgagcatcatcct
ccgttcacccctttcggcatgggaatctctgctggagagaatgcctcaagtgcacaaaga
agaggtgatgtgaacacaagtgagagtgagatgacagctgtctataggccaagagaagag
ccctcagaatga

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_3|345_aa
MYRKLKQDNEQKQTDPLKKWAKDMNRHFSKEDIQAAKKPEKWCLSEDIPWPEQLKGRHES
SRAHFLEAEKAKIKAPASGKALLPSHAATTEGKRAERNPVSSHGRKVKCRREETPLLLGG
RSGKGTGALQPSASPALVKHRTRQNPEASDSRPLPPHGTSRSTPDIQDHTSSVAMAPKQN
ENFEVTDRKLKIWIIKMLGEIQEKLENQLKETRKIIQDMLLVLLFLDFSQALTFHVTHGK
SRIRLPDSRNQVTVNGKYHITDGQFGSSFQMWQPLGFISGKDQPQVSLIFCLRERVDSAT
WITLEDVSTFQTKIFLILISGKKRNNKKKSTPLLLNPEQLKILSL

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_3|1038_bp
atgtataggaaacttaaacaagacaacgagcaaaaacaaacagacccattaaaaaaatgg
gcaaaggacatgaacagacacttctcaaaagaagacatacaagcagccaagaaacctgaa
aaatggtgcttgtctgaagacatcccctggcctgaacaactaaaaggacggcatgagagt
tctcgtgctcactttctggaggctgagaaagccaagatcaaggcaccagcttctggcaaa
gcccttcttccatcacatgctgccaccacagaaggcaaaagggcagagaggaatcctgtg
tcttcacatggcagaaaagtaaagtgcaggagagaggagacaccccttctgcttggggga
aggagtggaaagggtacaggggccttgcaacctagtgccagccctgctctggtaaaacac
agaacaaggcagaatcctgaagcatcagattccagaccattacccccacatggcacttcc
agatccaccccagatatacaggatcatactagttctgtagcaatggctcctaagcaaaat
gaaaattttgaagtgacagatagaaaactcaaaatatggattataaaaatgctcggtgag
atccaggagaaacttgaaaatcaacttaaagaaacaagaaaaataattcaggatatgtta
ttggttctgcttttcctggacttttcccaagctctcaccttccacgtaacacatgggaag
tctcgcattaggcttccagatagcagaaaccaggtgaccgttaacggcaagtaccacatc
actgatggtcagtttggaagctccttccagatgtggcagcctctggggtttatttctggg
aaggatcagcctcaggtgtcactcattttctgcttgagagagagagtggattctgctacc
tggatcaccttagaagatgtcagcacatttcaaactaagattttcttaattctgatctcc
gggaagaaaagaaataacaaaaaaaaatctactcctttactcctgaatcctgaacaattg
aagattttgagtctgtga

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_4|130_aa
MLLSLKSTPHSKFSLCSLGDQQHREEARAVGIPDVNIEMMKELNESKKLVNTLDKKNDAF
VASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKGDEVKSTIKFQMKKVLCLAVTVG
HVKMTGDEFV

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_4|393_bp
atgcttctcagtcttaagtccactccccactccaagttctccctctgttctttgggggac
cagcagcaccgtgaagaggcaagggccgtgggtatccccgacgtgaacatcgagatgatg
aaagaactcaacgagagtaagaaactggtcaatacgctggacaagaagaatgacgcattt
gtggcttcagagtctctgatcaagcagatcccacgaatcctcggcccaggcctaaataag
gcaggaaagttcccttctctgctcacacacaacgaaaacatggtggccaaaggggacgag
gtgaagtccacaatcaagttccaaatgaagaaggtgttatgtctggctgtgactgttggc
catgtgaagatgacaggcgatgagtttgtgtaa

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_5|621_aa
MQSEQSQITHGEPWSSLPIKGVLSHWVEATHTVHVLSSMAEADAEGNGLDCQQSTLLAAE
WPVISQKRSRAPPSARKLLLSDSRRVVRHVSHCPTTGASNWFRGGHVAQLTSMIWKGTAP
FHPLNFELRNAARATKADKRMRLKQAEAKRAEKTMVFCPGHTVPGWAPASPECQVPIHPT
PGLSSLPVLAPPLLLHLVRPALLPLAAPPPPLPRFSLRLKPLGQALGVPDCRALRLVRQV
CPRPLHVGLQLSCLPLVPAPEFSSARTSSLSAARGSPSAPACSSSLRLAGRLVLIHLHLV
DDQPRRLLRLLAGHLWFSQKGSYDLQSNKGIMDIEAYFERIGYKNSRNKLDLETLTDILE
HQIRAVPFENLNMHCGQAMELGLEAIFDHIVRRNRGGWCLQVNQLLYWALTTIGFQTTML
GGYFYIPPVNKYSTGMVHLLLQVTIDGRNYIVDAGSGSSSQMWQPLELISGKDQPQVPCI
FCLTEERGIWYLDQIRREQYITNKEFLNSHLLPKKKHQKIYLFTLEPRTIEDFESMNTYL
QTSPTSSFITTSFCSLQTPEGVYCLVGFILTYRKFNYKDNTDLVEFKTLTEEEVEEVLRN
IFKISLGRNLVPKPGDGSLTI

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_5|1866_bp
atgcagagtgaacagtctcaaataactcacggggaaccgtggagcagtctgcctattaaa
ggagtgcttagtcactgggtggaggccacccacacagtgcatgtccttagctcaatggct
gaagcagatgcagaaggcaatggtctggactgtcaacaatctacactccttgcagctgaa
tggccagttatttctcaaaaaagatcaagagctccaccctctgccaggaaacttttactt
tctgactccaggagggtagtgaggcatgtcagtcactgccccacaactggagccagcaac
tggttcagaggtggccatgtggcccaacttacatccatgatctggaaaggtacagctccc
ttccaccctttgaattttgagctgcggaatgcggcccgggctactaaggcagataaaaga
atgagactcaaacaggcagaagccaagagagcagagaagaccatggtgttctgtcccgga
cacacggtgcctggatgggctccagcttctcccgagtgccaggtgcccatacaccccacc
ccggggttgtcctcccttccagttttggcgccgccgcttcttctccacctcgtccgcccc
gcgctcctcccgctggcggcgccgccgccgccgctcccgcgcttctccctgcgcctcaag
cccctagggcaggcgctaggcgttccggattgtcgcgccctccgcctggttcggcaggtc
tgtccgcggccccttcacgttggcctccagctctcgtgccttccgctggtcccggccccg
gagttcagcagcgcccggacttcctccctttccgctgcgcgaggctccccttcagctcct
gcctgttcctcctctttgcgccttgctggccggctcgtgctcattcacctccaccttgtg
gacgaccagccccgacggctcctgcggctccttgcaggccacctctggttttctcaaaag
ggatcttatgacctacaatccaacaaggggatcatggacattgaagcatattttgaaaga
attggctataagaactctaggaacaaattggacttggaaacattaactgacattcttgag
caccagatccgggctgttccctttgagaaccttaacatgcattgtgggcaagccatggag
ttgggcttagaggctatttttgatcacattgtaagaagaaaccggggtgggtggtgtctc
caggtcaatcaacttctgtactgggctctgaccacaatcggttttcagaccacaatgtta
ggagggtatttttacatccctccagttaacaaatacagcactggcatggttcaccttctc
ctgcaggtgaccattgacggcaggaattacattgtcgatgctgggtctggaagctcctcc
cagatgtggcagcctctagaattaatttctgggaaggatcagcctcaggtgccttgcatt
ttctgcttgacagaagagagaggaatctggtacctggaccaaatcaggagagagcagtat
attacaaacaaagaatttcttaattctcatctcctgccaaagaagaaacaccaaaaaata
tacttatttacgcttgaacctcgaacaattgaagattttgagtctatgaatacatacctg
cagacgtctccaacatcttcatttataaccacatcattttgttccttgcagaccccagaa
ggggtttactgtttggtgggcttcatcctcacctatagaaaattcaattataaagacaat
acagatctggtcgagtttaaaactctcactgaggaagaggttgaagaagtgctgagaaat
atatttaagatttccttggggagaaatctcgtgcccaaacctggtgatggatcccttact
atttag

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_6|107_aa
MPYYGTPEGFGAEGNVRRSGKRQLAAGRYWSGEVSGDCPMTVQEVENCLKCTKIGKLKAD
SELGVGCMPAAAGRRVGTDTQRSLPDKHNKKTRKQSKPVINSHTLNP

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_6|324_bp
atgccctattatggcacccctgaaggctttggggctgaaggtaatgtgaggagatccgga
aagaggcagctggctgcaggaagatactggagtggggaagtcagtggggactgtcctatg
acagtccaggaagttgaaaactgcctcaagtgcactaagatagggaagctaaaagcagac
tcagaattgggggtagggtgtatgcctgcagctgcaggaagacgtgtgggaacagacaca
caacgctccctcccagacaagcacaacaaaaagacacggaagcagtcaaagcctgtgata
aactctcacaccctgaatccttaa

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_7|128_aa
MTSSNSKAPSPNTITLEVKDSVYEFVKDTNSQPLTPGRSQLIGKGWIYKRKRRQSIDKIP
EKTELDGVQSRDRKINLQQEVGHALCDKRGKRQRGGKEDVRSLEDKRLKISEDSYFLCEN
GGQPIYYV

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_7|387_bp
atgacctcatctaactctaaggccccatctccaaataccatcacattagaggtgaaagac
tcagtatatgaatttgtgaaagatacaaacagtcagcccttaacaccaggaagaagccag
ttaatagggaaaggttggatttataagagaaaaagaaggcaatcaattgataagatccct
gagaagacagagctagatggggtccagagcagagatagaaagattaacctgcaacaggag
gtgggacatgccctttgtgataagagggggaaaaggcaacgaggggggaaggaagatgtc
cgcagtttggaggataagagattgaagatatctgaggactcctattttctttgtgaaaat
ggaggccagcccatctactacgtgtaa

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_8|100_aa
MGRNQSRKGENSKNQSTSSPPKDHSSSPAMEQNWTENDFDELTEVGFRRLLITNFSKLKE
DVRIHCKEAKNLAKRLDEWLTRINSIEKTLNDQMELKTMA

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_8|303_bp
atggggagaaaccagagcagaaaaggtgaaaattctaaaaaccagagcacctcttctcct
ccaaaggatcacagctcatcaccagcaatggaacaaaactggacagagaatgactttgat
gagctgacagaagtaggcttcagaaggttgctaataacaaacttctccaagctaaaggag
gatgttcgaatccattgcaaggaagctaaaaaccttgcaaaaagattagacgaatggcta
actagaataaacagcatagaaaagaccttaaatgaccagatggagctgaaaaccatggca
tga

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_9|68_aa
MYYNPGQSDSGMELRYHREKGSQRSGVAELVERITDWTCWPPSLPPAGVRKPKNSYGGGK
RNIFNYII

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_9|207_bp
atgtactacaacccagggcagtctgactcaggaatggaacttcggtatcacagagaaaaa
ggctctcagcgttctggggtggctgagctggtagaaagaataacagactggacctgctgg
ccaccatctctgccaccagctggtgtgaggaagccaaaaaatagctatggaggtggaaag
aggaatattttcaattacatcatctga

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_10|141_aa
MEHDQARPVNSVSSGIRHTCAEFLPHHFLCELGTGHNITYGDCEIMMGKVARSKCSVHVS
VHHDDDDDDDDNEEEELLHSSMPLNLHGSNAWQSAPTDTNFSISCDSHAYFGFSLYKTQL
FILPFQNHPVLLPLILDFLLP

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_10|426_bp
atggagcacgaccaagcacggccagttaatagtgtcagttctggaattagacacacctgc
gctgaattcctgccccaccacttcttgtgtgaattgggcacaggacataacattacctat
ggtgactgtgaaatcatgatgggaaaggtggcacgcagcaaatgctcagtgcatgtcagc
gttcaccatgatgatgatgatgatgatgatgacaatgaggaggaagaactgctccactcc
agcatgcctctaaacctgcatgggagcaatgcctggcagagcgctcccacagacacgaac
ttttccatttcctgtgattcacatgcttattttggtttctcgttatataagacccagctc
ttcattttgccatttcaaaatcacccagtgctcctaccactcatcctcgatttccttctt
ccatga

>gi568815590f:18300004_18500873|GENSCAN_predicted_peptide_11|35_aa
LCACCQNENEQCQCHDVQLSCDLDSGLAYTEATES

>gi568815590f:18300004_18500873|GENSCAN_predicted_CDS_11|108_bp
ctctgtgcgtgctgccaaaatgaaaatgaacaatgtcagtgccatgatgtccagttgagc
tgtgacctggattctggtctcgcatacacagaagcaactgaaagctga