GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:12:05

Sequence gi568815590f:18122048_18322917 : 200870 bp : 39.01% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    138    133    6                               1.05
 1.07 Term -   7412   7157  256  1  1  111   44   124 0.375   4.37
 1.06 Intr -  22575  22506   70  1  1    2  110    60 0.010  -3.08
 1.05 Intr -  24107  24059   49  2  1  121   91    41 0.101   5.03
 1.04 Intr -  51070  50928  143  2  2   88   18   104 0.101   2.55
 1.03 Intr -  60182  60121   62  1  2   88   99    68 0.847   5.36
 1.02 Intr -  61399  61225  175  2  1   79   59   105 0.893   4.78
 1.01 Init -  62140  62038  103  1  1   76   90     9 0.782   0.35
 1.00 Prom -  63287  63248   40                              -5.85

 2.00 Prom +  70471  70510   40                              -4.45
 2.01 Init +  72010  72129  120  0  0   28   46    96 0.412  -0.36
 2.02 Term +  72856  73020  165  0  0   72   45   142 0.901   5.23
 2.03 PlyA +  74025  74030    6                               1.05

 3.00 Prom +  74645  74684   40                              -5.15
 3.01 Init +  77626  77749  124  0  1   89   82    84 0.382   8.28
 3.02 Term +  80659  80747   89  2  2   47   49   121 0.751   0.94
 3.03 PlyA +  81203  81208    6                               1.05

 4.03 PlyA -  82503  82498    6                               1.05
 4.02 Term -  83354  83281   74  0  2   93   47    61 0.453  -0.41
 4.01 Init -  84314  84155  160  2  1   84  109   144 0.967  16.13
 4.00 Prom -  84618  84579   40                              -8.65

 5.00 Prom +  85746  85785   40                              -7.15
 5.01 Init +  87171  87241   71  2  2   73   48   105 0.991   5.57
 5.02 Intr +  87734  87908  175  2  1  112   95    83 0.959  10.42
 5.03 Term +  88590  88691  102  2  0   65   38   113 0.504   1.30
 5.04 PlyA +  90043  90048    6                               1.05

 6.05 PlyA -  91046  91041    6                               1.05
 6.04 Term -  93966  93793  174  0  0   63   48   119 0.530   2.18
 6.03 Intr -  95399  95247  153  2  0   71   45    92 0.388   2.55
 6.02 Intr -  96224  96055  170  0  2   36   50   123 0.889   2.04
 6.01 Init -  97016  96917  100  2  1   73  116    73 0.436   9.07
 6.00 Prom -  99287  99248   40                              -7.45

 7.00 Prom +  99656  99695   40                              -9.65
 7.01 Sngl + 100001 100873  873  1  0   93   39   624 0.810  53.69
 7.02 PlyA + 101083 101088    6                               1.05

 8.00 Prom + 103830 103869   40                              -6.45
 8.01 Init + 117375 117409   35  2  2   83   66    27 0.268  -0.61
 8.02 Intr + 121436 121628  193  2  1  118   91    45 0.211   6.37
 8.03 Intr + 139729 139868  140  0  2   28   42   192 0.112   6.94
 8.04 Intr + 148416 148471   56  0  2   94  111    45 0.350   5.10
 8.05 Term + 156066 156148   83  1  2   36   48   147 0.071   2.38
 8.06 PlyA + 157096 157101    6                               1.05

 9.05 PlyA - 157183 157178    6                               1.05
 9.04 Term - 157925 157617  309  2  0   33   33   223 0.130   5.38
 9.03 Intr - 162832 162721  112  0  1   47   81    71 0.121   1.76
 9.02 Intr - 167957 167882   76  0  1   31  111    48 0.017  -0.95
 9.01 Init - 175134 175035  100  0  1   78   36   110 0.188   5.27
 9.00 Prom - 179976 179937   40                              -6.95

10.03 PlyA - 180813 180808    6                               1.05
10.02 Term - 190942 190854   89  2  2  120   53    80 0.700   4.54
10.01 Init - 195697 195595  103  1  1   34   77   130 0.534   6.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_1|285_aa
MNFFNKTSKDVMASHGAQAETCHRGGATTESLHQDGTLDFGLTGTIEKELMYFICEDVSF
GGPQPECCGLKWFECLSPSPTDVEICNANSIERNIKWNNYPCKKTPSKELKKSGHSQESP
VREIYSSSSTVLCLTIKHHGRLAPEERSWAPHENGLRMIKCGPDVCTQQPGILAVQTERI
PEATDPYPNLTAELLRKYMSRAFQAFKGDKELGSLSLHGHCRHSSTTEHLKLRYPATLAD
SYIPSPDGLEENKKEFPVFPSKVSHSLPSYFPHGMVLDYLELRKG

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_1|858_bp
atgaatttcttcaacaagacttcaaaggatgttatggcaagtcatggggcccaggcagag
acttgtcacaggggtggggccaccacagagagtcttcatcaagatgggactctggacttt
ggacttaccgggactattgagaaagaattaatgtattttatatgcgaggacgtgagtttt
gggggaccacagccagaatgctgtggtttaaaatggtttgaatgtttgtccccttcccca
actgatgttgaaatttgcaatgcaaacagtattgagaggaacatcaaatggaacaactat
ccttgcaagaagacaccttcaaaagagctaaagaaatcaggtcacagccaggagagccca
gtcagagaaatctacagcagcagtagcactgttctctgcctgacaataaaacaccatgga
agactcgcccctgaagagaggtcctgggctccccatgagaacggactgaggatgataaaa
tgtggacctgatgtctgcacacagcagcctggcatcctagccgttcagacagaaagaatt
ccagaggcgactgatccctatccgaatctgactgctgagcttctaaggaaatatatgagc
agggccttccaagcattcaaaggggacaaagagttgggttccctaagcctgcatggtcac
tgcagacattcaagcactacagaacaccttaagctcaggtatcctgcaactcttgcagac
tcctatatacctagccctgatggacttgaggaaaataaaaaagaattccctgtgttccca
agtaaagtttctcactctcttccctcttattttccacatggaatggtgctggactatttg
gagctgcggaaggggtga

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_2|94_aa
MCSPLEPDPYWGMIRAEWNWDNRMASLLCVHWRWGSADPLLRSCMGVIVLVSVRWIPACS
QMEQRSDPLLTNTSSKLLAVSAVVQKMVKSLFDE

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_2|285_bp
atgtgtagccccctggagccagatccttactggggtatgattagggctgaatggaattgg
gacaaccggatggccagcctgctttgtgttcactggaggtgggggagtgccgacccactg
ctaaggagctgcatgggagtaattgtgctggtttctgttagatggatacctgcatgttct
cagatggagcagagatcagaccctcttctcactaatacgtcatccaaattgctagcagtt
tcagcagtggtccagaaaatggtcaaatctctgtttgatgagtaa

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_3|70_aa
MTFECVMADKSLVTAAVLEVAHSIYNEWLLQLGATRFFVHLGMKRQTLAVSVTAYKGSED
PKSEEQQDLL

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_3|213_bp
atgacctttgagtgtgtgatggctgataagtcactggtgacggctgcagttttggaagta
gctcatagcatttacaatgagtggttattacagctgggggctactcgtttctttgtgcat
ttaggaatgaagcggcagaccctggcggtgagtgttacagcttacaaaggtagtgaggac
ccaaagagtgaggagcagcaagatttattgtga

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_4|77_aa
MTGILLEDLQREGTESEQREHTEGGLRGGNLGTLHGSAAYLVLSLCPSSSRGTGHREGTQ
TCVVCQHPTPKPIPPPV

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_4|234_bp
atgactggtatactcctagaagatcttcaaagggaaggcactgaaagtgaacagagggaa
cacacagaaggtggactgagagggggaaacctgggaaccctacatgggtctgctgcatac
ctggtgttgtccctgtgccccagcagctccaggggaacagggcacagagaaggcacacag
acctgtgttgtctgccagcaccctacccccaagccaataccaccaccagtatga

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_5|115_aa
MPRESLRIESRVHVAGRQRHVLEQLPVLLFLDLFQALTFHITHGTSSVRLPESRNQVKYK
STVLPAGGMGIIGQYNSPPFFMDPVNPTGSKLVIIPAPLALADKKPLMILDVQED

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_5|348_bp
atgccaagagaaagccttcgcatagagtcccgagttcacgtggcaggacgccagaggcat
gttctagaacagttaccagttctgcttttcctggacctgttccaagctctcacgttccac
atcacacatgggacatctagtgtcaggctcccagagagcaggaaccaggtgaaatataag
agcacagtcctcccagccggtggcatggggataatcggacaatacaactctccacccttt
tttatggacccagttaatcctacaggcagcaagctcgtaataattcctgctcctcttgca
ctagctgataaaaagcccctaatgatcctggatgtccaggaagattga

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_6|198_aa
MTYTKHIKDQDVVLAPGLPLGTAIIRHVEADKQELGPGDQEYRITKCPDNVPQFSTSSVE
TSSCGREYEIETQKEIIEEKRKHWNKEQETAQHLPPRKIVYIYSASKGRKASEDKLQLCL
PEVKYLGHIILVKGLSINPDNLLHENGASRYPILSPLNLQSLKSSSEKGIDLSPRPTSLT
LANKSPKMIETRLVIFLN

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_6|597_bp
atgacatataccaaacacatcaaagaccaggatgtagtgctagcacctggtcttcctcta
ggtacagctataattcggcatgttgaggcagataaacaagaattggggccaggagaccaa
gaataccgaattacaaaatgtcctgacaacgtaccacaatttagtactagtagtgttgaa
acatcgtcttgtggccgggaatatgaaatagagacacagaaggaaataatagaggagaag
agaaaacactggaataaagagcaggaaacggcacagcatcttcctcccaggaagatagtc
tacatttactcagccagcaagggacgcaaagcgtctgaagacaaacttcagctgtgctta
ccggaagttaagtatttggggcatattatcttggtcaaaggactgagtattaaccctgat
aatctcttacatgaaaacggtgcttctcgatatcccatcctttcccctttaaatttgcag
tccttaaaatcatcttcagagaaaggcatagacctgtctcccaggcccacatccttaact
ttggcaaataaatctcctaaaatgattgagactcgtctcgtcattttcctcaattga

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_7|290_aa
MDIEAYLERIGYKKSRNKLDLETLTDILQHQIRAVPFENLNIHCGDAMDLGLEAIFDQVV
RRNRGGWCLQVNHLLYWALTTIGFETTMLGGYVYSTPAKKYSTGMIHLLLQVTIDGRNYI
VDAGFGRSYQMWQPLELISGKDQPQVPCVFRLTEENGFWYLDQIRREQYIPNEEFLHSDL
LEDSKYRKIYSFTLKPRTIEDFESMNTYLQTSPSSVFTSKSFCSLQTPDGVHCLVGFTLT
HRRFNYKDNTDLIEFKTLSEEEIEKVLKNIFNISLQRKLVPKHGDRFFTI

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_7|873_bp
atggacattgaagcatatcttgaaagaattggctataagaagtctaggaacaaattggac
ttggaaacattaactgacattcttcaacaccagatccgagctgttccctttgagaacctt
aacatccattgtggggatgccatggacttaggcttagaggccatttttgatcaagttgtg
agaagaaatcggggtggatggtgtctccaggtcaatcatcttctgtactgggctctgacc
actattggttttgagaccacgatgttgggagggtatgtttacagcactccagccaaaaaa
tacagcactggcatgattcaccttctcctgcaggtgaccattgatggcaggaactacatt
gtcgatgctgggtttggacgctcataccagatgtggcagcctctggagttaatttctggg
aaggatcagcctcaggtgccttgtgtcttccgtttgacggaagagaatggattctggtat
ctagaccaaatcagaagggaacagtacattccaaatgaagaatttcttcattctgatctc
ctagaagacagcaaataccgaaaaatctactcctttactcttaagcctcgaacaattgaa
gattttgagtctatgaatacatacctgcagacatctccatcatctgtgtttactagtaaa
tcattttgttccttgcagaccccagatggggttcactgtttggtgggcttcaccctcacc
cataggagattcaattataaggacaatacagatctaatagagttcaagactctgagtgag
gaagaaatagaaaaagtgctgaaaaatatatttaatatttccttgcagagaaagcttgtg
cccaaacatggtgatagattttttactatttag

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_8|168_aa
MAKVTDFTKVNRRTHVIVQVFSMHTDKSGWECNRKTFSSRENNFSASLQLSSFALEVSLC
FKKHLLYIQEVHLVLQENFAMGPRNKKLNEVFLSPYVLESLTYDEVGAASRSPREETGEK
MISTFGKDETIMEFNKQYLSSDLRQHDIEKAPVIDGFYELPVLMDFTE

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_8|507_bp
atggccaaagtgactgattttacgaaagtgaatagaaggacacatgtgattgtccaagtg
ttctccatgcacacagataagtctgggtgggaatgtaaccgaaagactttttcaagtaga
gagaacaacttttccgcatcccttcaactatctagctttgcattggaagtgtctctgtgc
ttcaagaagcatcttctctacattcaggaagttcaccttgttctgcaggaaaactttgca
atgggtccccgaaataagaaactgaatgaggttttcctctcgccttatgtccttgagagc
ttaacttatgatgaagtaggagcagcctctcgttcaccacgtgaggaaacaggggagaaa
atgatcagcacttttggtaaagatgagaccatcatggaattcaacaaacagtatctgtcc
tcagatctcaggcagcatgacattgagaaagcccctgttatcgacggcttttatgagctt
cctgtcctcatggatttcacagaatga

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_9|198_aa
MNRHLSKEDIQAANTDEKLLIITNHQRNANQNRMMSMNYLSETIWPQGVEEADCGSQTSC
QQSLRPESTKHDFMGGISNKSCNERALKDLMFHAGKVSAISYVIEMETSRRKQKKNNLRC
LMKGLEQIFLSFDTVGNRLMGTAFQVLAKMIDTVNGHLANCIKVHVGQDTQNCFSLPRQL
NKQSRLRSKVSGTRVQEL

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_9|597_bp
atgaacaggcacctctcaaaagaagacatacaagcagccaacacagatgaaaaactgctc
atcatcactaatcatcagagaaatgcaaatcaaaaccgcatgatgtcaatgaattatctg
agtgaaacaatatggcctcaaggagtggaggaagccgactgtgggagtcagaccagctgc
caacaatctttgaggcctgagtcaaccaagcatgatttcatgggcggtatttcaaataag
agttgcaatgagagagccttgaaggacttgatgttccatgcgggaaaggtgtcagctata
agctatgtgatagaaatggaaacttctagaagaaagcaaaagaagaataatctcagatgc
ttaatgaaaggactggagcagatattcttgagttttgacactgtaggaaatagacttatg
ggcacagcctttcaagtgttagctaaaatgattgacaccgtgaatggacacttggcaaac
tgcattaaagtacatgtgggacaagatactcagaactgctttagtctcccaaggcagttg
aataagcaaagtcgactgcgttctaaggtcagtggaacaagagtacaagaattgtag

>gi568815590f:18122048_18322917|GENSCAN_predicted_peptide_10|63_aa
MGSCWKTAVPNVGTALEHHPPFTPFGMGISAGENASSAQRRGDVNTSESEMTAVYRPREE
PSE

>gi568815590f:18122048_18322917|GENSCAN_predicted_CDS_10|192_bp
atggggagctgttggaagacagctgttcccaatgtggggacagctcttgagcatcatcct
ccgttcacccctttcggcatgggaatctctgctggagagaatgcctcaagtgcacaaaga
agaggtgatgtgaacacaagtgagagtgagatgacagctgtctataggccaagagaagag
ccctcagaatga