GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:26:44

Sequence gi568815589f:76298736_76499583 : 200848 bp : 42.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2608   2638   31  0  1   77  115    41 0.741   5.66
 1.02 Intr +  17588  17717  130  0  1   43   87    46 0.037  -1.17
 1.03 Intr +  19432  19584  153  1  0   83   49    75 0.078   1.37
 1.04 Intr +  22687  22904  218  1  2  116   77   125 0.007  11.42
 1.05 Intr +  24317  24553  237  0  0  101   88   139 0.008  11.86
 1.06 Intr +  29274  29504  231  1  0   99   70    88 0.043   4.92
 1.07 Intr +  33698  33875  178  0  1   54  110   104 0.036   7.26
 1.08 Intr +  39495  39712  218  0  2   95  100    83 0.613   7.42
 1.09 Intr +  40314  40389   76  1  1   81   34    61 0.016  -2.35
 1.10 Intr +  52622  52946  325  2  1   75   75   103 0.032   2.55
 1.11 Intr +  55298  55484  187  1  1   56   76    82 0.072   2.14
 1.12 Term +  59778  60187  410  1  2   87   41   748 0.788  64.39
 1.13 PlyA +  60998  61003    6                               1.05

 2.03 PlyA -  62123  62118    6                               1.05
 2.02 Term -  63891  63841   51  0  0   88   55    14 0.215  -5.45
 2.01 Init -  64273  64121  153  1  0   68   57   140 0.201   8.93
 2.00 Prom -  69225  69186   40                              -2.25

 3.06 PlyA -  70114  70109    6                               1.05
 3.05 Term -  88794  88664  131  1  2   87   45   159 0.978   8.86
 3.04 Intr -  89921  89819  103  2  1   55   97   104 0.982   6.83
 3.03 Intr -  93834  93683  152  1  2   72  103   126 0.966  11.46
 3.02 Intr -  95549  95355  195  0  0   44   94    92 0.817   3.86
 3.01 Init -  95819  95567  253  2  1   99   66    75 0.508   2.44
 3.00 Prom -  96865  96826   40                             -10.45

 4.00 Prom +  97557  97596   40                              -6.55
 4.01 Init +  99964 100473  510  0  0   60   20   586 0.755  43.97
 4.02 Term + 100492 100851  360  0  0    1   43   356 0.750  15.95
 4.03 PlyA + 100901 100906    6                               1.05

 5.17 PlyA - 101010 101005    6                               1.05
 5.16 Term - 103422 103280  143  1  2   77   42   103 0.575   1.71
 5.15 Intr - 107469 107272  198  1  0   -6   48   196 0.012   4.60
 5.14 Intr - 116162 116042  121  2  1   36   -6   179 0.019   2.45
 5.13 Intr - 116672 116621   52  1  1   55   77    57 0.052  -0.71
 5.12 Intr - 134566 134385  182  1  2   69   72   149 0.120   9.14
 5.11 Intr - 135533 135427  107  0  2   49   95    82 0.562   4.01
 5.10 Intr - 138529 138501   29  0  2   31  100    40 0.053  -3.66
 5.09 Intr - 145614 145466  149  0  2  120   98    24 0.143   4.71
 5.08 Intr - 151864 151648  217  0  1   51   73    79 0.027   0.28
 5.07 Intr - 154457 154341  117  1  0  112   60    74 0.029   5.66
 5.06 Intr - 171149 171120   30  1  0   95  101    28 0.050   1.13
 5.05 Intr - 188638 188510  129  0  0   28  100   138 0.074   7.89
 5.04 Intr - 194371 194217  155  1  2   31   87    69 0.018  -0.95
 5.03 Intr - 194653 194461  193  0  1    1   -6   211 0.062   1.57
 5.02 Intr - 194903 194725  179  2  2   83   44   101 0.685   3.00
 5.01 Intr - 195514 195399  116  2  2   50  109    81 0.681   5.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  24521  24280  242  0  2   87   41   211 0.931  12.65
S.002 Init -  25896  25830   67  0  1   73   81   106 0.982   9.69
S.003 Term -  44058  43919  140  1  2   35   44   186 0.849   6.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:76298736_76499583|GENSCAN_predicted_peptide_1|797_aa
MALEKKAPDNGNSKGFEVSRRERPDLSLGEVKFFTMLTGTMNPSNFHSIRRCDWDMDEAG
NLHSQQTNTGTENQTLHVLTHKWELNNENTWTQGGEHHTPGPVGGGSYAEDGICERCSSP
CRTCEGNATNCHSCEGGHVLHHGVCQENCPERHVAVKGVCKHCPEMCQDCIHEKTCKECT
PEFFLHDDMCHQSCPRGFYADSRHCVPCHKDCLECSGPKADDCELCLESSWVLYDGLCLE
ECPAGTYYEKETKECRDCHKSCLTCSSSGTCTTCQKGLIMNPRGSCMANEKCSPSEYWDE
DAPGCKPCHVKCFHCMGPAEDQCQTCPMNSLLLNTTCVKDCPEGYYADEDSNRCAHCHSS
CRTCEGRHSRQCHSCRPGWFQLGKECLLQCREGYYADNSTGRCERCNRSCKGCQGPRPTD
CLSCDRFFFLLRSKGECHRSCPDHYYVEQSTQTCERCHPTCDQCKVSSITPFEAASRSPQ
LSILPPHQVICVLRRIHLQCYSSLEFLVSTRNRPPLQCERKERKKERKKERKKERKKERK
KERKKERKKGRKERERREREKEGKGGRRERKKEKKEKERERKREKEERKRERKKERKKEG
EKFNCEKCHESCMECKGPGAKNCTLCPANLVLHMDDSHCLHCCNTSDPPSAQECCDCQDT
TDECILRTSKVRPATEHFKTALFITSSMMLVLLLGAAVVVWKKSRGRVQPAAKAGYEKLA
DPNKSYSSYKSSYRESTSFEEDQVIEYRDRDYDEDDDDDIVYMGQDGTVYRKFKYGLLDD
DDIDELEYDDESYSYYQ

>gi568815589f:76298736_76499583|GENSCAN_predicted_CDS_1|2394_bp
atggccctggaaaaaaaggcaccagataatggaaattccaaaggttttgaggttagccga
agagaaagaccagacctctctttgggtgaggtcaaattctttactatgcttacaggaaca
atgaatccatcaaattttcattcgattagaagatgtgattgggacatggacgaagctgga
aaccttcattctcagcaaactaacacaggaacagaaaatcaaacactgcatgttctcact
cataagtgggagttgaacaatgagaacacatggacacagggaggggaacatcacacacca
gggcctgtcggagggggctcttatgcagaagacggcatatgtgaacgctgtagctctcct
tgcagaacatgtgaaggaaacgccaccaactgccattcttgtgaaggaggccacgtcctg
caccacggagtgtgccaggaaaactgccccgagaggcacgtggctgtgaagggggtatgc
aagcattgcccagagatgtgtcaggactgcatccatgagaaaacatgcaaagagtgcacg
cctgagttcttcctgcacgatgatatgtgccaccagtcctgtccccgtggcttctatgca
gactcgcgccactgtgtcccctgccataaagactgtctggagtgcagtggccccaaagcc
gacgactgcgagctctgtcttgagagttcctgggtcctctatgatggactgtgcttggag
gagtgtccagcaggaacctattatgaaaaggagactaaggagtgcagagattgccacaag
tcctgcttgacctgctcatcatctgggacctgcaccacctgtcagaaaggcctgatcatg
aaccctcgtgggagctgcatggccaacgagaagtgctcaccctccgagtactgggatgag
gatgctcccgggtgcaagccctgccatgttaagtgcttccactgcatggggccggcggag
gaccagtgtcaaacatgccccatgaacagccttcttctcaacacaacctgtgtgaaggac
tgcccagagggctattatgccgatgaggacagcaaccggtgtgcccactgccacagctct
tgcaggacatgtgaagggagacacagcaggcagtgccactcctgccgaccgggctggttc
cagctaggaaaagagtgcctgctccagtgcagggaaggatattacgcagacaactccact
ggccggtgtgagaggtgcaacaggagctgcaaggggtgccagggcccacggcccacagac
tgcctgtcttgcgatagatttttctttctgctccgctccaaaggagagtgtcatcgctcc
tgcccagaccattactatgtagagcaaagcacacagacctgtgagagatgccatccgact
tgtgatcaatgcaaagtatctagtatcacaccttttgaagcagccagcaggtcaccccaa
ctctcaatcttgcccccacaccaggtcatctgtgtattaagaagaattcatttgcagtgt
tacagctctttagaatttctggtttctaccagaaaccgcccccccctgcaatgtgaaaga
aaggaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaaggaaggaaagaaagagaaagaagagagagagag
aaggaagggaagggaggaaggagagagagaaagaaagagaagaaagaaaaagaaagagaa
agaaagagagagaaagaagaaagaaagagagagagaaagaaagaaagaaagaaagaggga
gagaagtttaactgtgaaaaatgccacgagagctgcatggaatgcaagggaccaggggcc
aagaactgcaccttgtgccctgccaacctggtgctgcacatggacgacagccactgcctc
cactgctgcaacacctctgatccccccagtgcccaggagtgctgtgactgccaggacacc
acggacgaatgcatccttcgaacaagcaaggttaggcctgcaactgagcatttcaagaca
gctctgttcatcacctcctccatgatgctggtgcttctgctcggggcagctgtggtagtg
tggaagaaatctcgtggccgagtccagccagcagcaaaggccggctatgaaaaactggcc
gaccccaacaagtcttactcctcctataagagcagctatagagagagcaccagctttgaa
gaggatcaggtgattgagtacagggatcgggactatgatgaggatgatgatgatgacatc
gtctacatgggccaggatggcacagtctaccggaaatttaaatatgggctgctggatgac
gatgacatagatgagctggaatatgatgacgagagttactcctactaccagtaa

>gi568815589f:76298736_76499583|GENSCAN_predicted_peptide_2|67_aa
MSRRQNSSDTELKKEQFIRPGASARLLSQEPSSPSEQFLSLLRAHNSKGVHFLLLLSLEA
EIGHKTI

>gi568815589f:76298736_76499583|GENSCAN_predicted_CDS_2|204_bp
atgagccgcagacaaaactcctcagacaccgagttaaagaaggagcagtttattcggcca
ggagcatcggcaagactcctgtctcaagagccgagctccccgagtgagcaattcctgtcc
cttttaagggctcacaactctaagggggtccactttttacttcttctttctttggaggca
gaaattgggcataagacaatatga

>gi568815589f:76298736_76499583|GENSCAN_predicted_peptide_3|277_aa
MGRGYGSRAGSRRSAEEGSARRRRGGRLCASGRPLPPPRSHPALTSAVSAALQRRRSSSG
ARRYLLGRRRQGFAVACGRRRPATGRAHAPVPRLVRGLGAASTAAPQDAQTGPQPIPRAD
CIMRHLPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDV
HKMVVSIGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISA
IQGDIEEAKKRLELPEHLKIKEDNFFQVSKSKIMNGH

>gi568815589f:76298736_76499583|GENSCAN_predicted_CDS_3|834_bp
atggggcggggctacggaagccgagcgggctcgaggcgttcggctgaggaagggagcgca
cgccggcggcgcggaggccggctctgcgcttcgggccgccccctccccccaccccgctca
cacccggcacttacttcggctgtctccgctgccctccagcggagacgcagctcctcaggc
gcccggcggtatttgttgggtcggcggcgtcagggattcgcagtggcctgtggtcggcgt
cgtccggccactggcagagctcacgctcctgtcccccggctggtccggggtctgggcgcc
gcgtcgacggcggctccgcaggacgcgcagaccgggccgcagcccattccccgagcggac
tgcattatgaggcacctgccttacttctgccggggtcaagtggtgcggggcttcggccgc
ggctccaagcagctgggcatccccacagctaattttcctgagcaagtggtagataatctt
ccagctgatatatccactggtatttactatggttgggccagtgttggaagtggagatgtc
cataagatggtggtgagcataggatggaacccatattacaagaatacgaagaagtctatg
gaaacacatatcatgcataccttcaaagaggacttctatggggaaatcctcaatgtggcc
attgttggctacctgagaccagaaaagaactttgattctttagagtcacttatttcagca
attcaaggtgatattgaagaagctaagaaacgactagagttaccagaacatttgaaaatc
aaagaagacaatttcttccaggtttctaaaagcaaaataatgaatggccactga

>gi568815589f:76298736_76499583|GENSCAN_predicted_peptide_4|289_aa
MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYICKRKSNGIYIINLKRTWEKLLL
AASAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGHFTPGTFTNQIQAAFREPW
LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPMRYVDIAIPCNNKGAHSMLAREVLRMC
STISYDHPWEVMPDLYFYRDPEDIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVA
DWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGATTDWS

>gi568815589f:76298736_76499583|GENSCAN_predicted_CDS_4|870_bp
atgtccggagcccttgatgtcctgcaaatgaaggaggaggatgtccttaagttccttgca
gcaggaacccacttaggtggcaccaatcttgacttccagatggaacagtacatctgtaaa
aggaaaagtaatggcatctatatcataaatctgaagaggacctgggagaagcttctgctg
gcagctagtgctattgttgccattgaaaaccctgctgatgtcagtgttatatcctccagg
aatactggccagagggctgtgctgaagtttgctgctgccactggagccactccaattgct
ggccacttcactcctggaaccttcactaaccagatccaggcagccttccgggagccatgg
cttcttgtggttactgaccccagggctgaccaccagcctctcacggaggcatcttatgtt
aacctacctaccattgctctgtgtaacacagattctcctatgcgctatgtggacattgcc
atcccatgcaacaacaagggagctcactcaatgctggctcgggaagttctgcgcatgtgt
agcacgatttcctatgaccacccgtgggaggtcatgcctgatctctacttctacagagat
cctgaagatattgaaaaagaagagcaggctgctgctgaaaaggcagtgaccaaggaggaa
tttcagggtgaatggactgctccagctcctgagttcactgctactcagcctgaggttgca
gactggtctgaaggtgtacaggtgccctctgtgcctattcagcagttccctactgaagac
tggagcgctcagcctgccacggaagactggtctgcagctcccactgctcaggccactgaa
tgggtaggagcaaccactgactggtcttaa

>gi568815589f:76298736_76499583|GENSCAN_predicted_peptide_5|705_aa
XEYARVQVFKNASARATKSDLPRSSLWSSRKTSVSAAVSKETSKEISKGPQKPPGYQLCP
LQAVGGGEFGPTQVHVPFSLSDLKQIKADLGKFSDDPDRSNSGPLNERNVASAAAREFGD
TWYLSQVNDRMTADERDKFPTGQQAIPCMDPTGTSTQIMGTGVGKEENPSAFLKRLREAL
RKYTPLSPDSLEGQLILKDKFITQSAADVRRKLQKTTVQCPRGCCDWSKIPTTVFDVKAM
PVSRRTVTQVREPKRHPRFQGMESWAMRTGEAGISCAKQEMAEQMTPNTGQMRLATVFSV
TYSQPKGLAKLKKIDKHNIDEGVGIQTPVLLSVVEISTNFLEGIWTTWILMDNYSSRNLS
YVGNFTNTQRFQNRNTVNNPFCMASSNLMLLSTSRFNLDIALISISSLDLSSELQTHISN
CLVNISLYRMLNRLGMQPTSVDDDNHTTLVPPYPQEIRSKTPSGYSKSLIVLNPPTGLGM
TWPCCFPLRGATAELRRGGRAEGYSVTVVFVPAFGGVPSSWSASKKNEIMLTIEGWGEKS
KGQRQYVKFTVKDKTGGEQDWYHTSEVVKTLLMKQDVVKKPAKTHRNQDGDETKDLNRHF
TKDDIQMANKHMKRCSTSYVIREMQITTLGLLEGPKSRTLTTPNAGKDVQQQELSLIAVA
GHRFTKTKVPFFPLYPEGQKLTTEDNCSPHLAGDGTRGIYVNKLC

>gi568815589f:76298736_76499583|GENSCAN_predicted_CDS_5|2118_bp
ngagaatacgcaagggtgcaggttttcaagaatgcgtcagcaagggccactaaatctgac
cttcctcggtcatccttgtggtctagcaggaaaactagtgtttctgctgctgtgtcgaag
gaaacaagcaaagaaatctccaaaggaccacaaaaacccccaggctatcagttatgtccc
cttcaagctgtagggggaggggaatttggcccaacccaggtacatgtccccttctccctc
tctgacttaaagcagatcaaggcagacctggggaagttttcagatgatcctgatagatca
aactctgggccattaaatgaaaggaatgtggcttcagctgcagcccgagagtttggagat
acctggtatcttagtcaagtaaatgatagaatgacagctgacgaaagggacaaattccct
accggtcagcaagccatcccctgtatggatcccactgggacctcaactcagatcatgggg
actggagtcggcaaggaagagaatccttctgccttcctcaagcggctacgggaggcctta
agaaaatatactcccctgtcacccgactccctcgagggtcaattgatcctaaaagataag
tttattacccaatcagctgcagatgtcaggagaaagctccaaaagactactgttcagtgt
cccagaggctgctgtgactggagcaaaataccaactactgtgtttgatgtcaaagccatg
ccagtatctcggaggactgtgacccaagtgagggagcccaaacgccacccaagattccaa
ggaatggaatcttgggccatgcgcactggtgaagcagggatctcctgtgctaaacaggag
atggctgaacagatgacacccaatactgggcagatgagattggctacagttttttcagtt
acatactcacagcctaagggattggcaaagttgaaaaagattgataaacataatatagat
gaaggtgtaggaatacagactcctgtgctgctctctgttgtagagatttctacaaacttt
ctagaaggcatttggacaacatggatacttatggacaactattcatctaggaatttatcc
tatgtaggaaattttacaaatacacaaagatttcagaatcgaaacactgtaaacaatccc
ttctgtatggcctcatccaacctcatgctgttaagtacatctagatttaacctcgacatc
gctctgatttctatctctagtctggacctgtcctcagaactccagactcatatttccaac
tgcttagtaaacatctccctttacagaatgctgaaccgtctgggaatgcagcccacttct
gttgatgatgataatcatactacattagtccccccttatccacaggagatacgttccaag
acccccagtggatactcgaaatccttaatagtactgaaccctcccacaggtttggggatg
acctggccctgctgctttccgttacgtggggcaactgctgagctccgaagagggggcagg
gcagagggctacagtgttactgtcgtctttgtacctgcattcggaggggtcccaagttct
tggtccgcatccaagaagaatgagattatgctgactattgaagggtggggggaaaaatcc
aaggggcagagacagtatgtgaagttcaccgtcaaggataagactggaggtgaacaggac
tggtatcacacgtcagaggttgtaaagaccctactgatgaaacaggatgtggtaaagaag
ccagccaaaactcaccgaaaccaagatggagatgaaacaaaagacctgaacagacacttc
accaaagatgatatacagatggcaaataagcatatgaaaagatgttccacatcatatgtc
atcagagaaatgcaaattaccactctaggcctattggaagggcccaaatccagaacactg
accacaccaaatgctggcaaggatgtgcagcaacaggagctctccttaattgctgtggca
ggacacagatttacaaagacaaaggtgcccttcttccctctgtacccggaaggacaaaag
ttaaccactgaagacaactgtagccctcatctggctggagatggcacaagaggaatctac
gttaataagctttgctaa