GENSCAN 1.0	Date run:  8-Nov-116	Time: 08:26:52

Sequence gi568815589f:138219898_138420832 : 174820 bp : 41.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1019   1168  150  1  0   81   -8   151 0.323   4.89
 1.02 Intr +   1323   1431  109  2  1   71  100   117 0.157  10.14
 1.03 Intr +   6476   6591  116  0  2  111   72    27 0.122   2.65
 1.04 Intr +  11011  11206  196  0  1   59   97   123 0.147   8.37
 1.05 Term +  15298  15470  173  2  2   70   39   112 0.138   1.51
 1.06 PlyA +  15964  15969    6                               1.05

 2.00 Prom +  16678  16717   40                              -3.85
 2.01 Init +  17669  17755   87  1  0   69   52    75 0.491   2.70
 2.02 Intr +  23723  23832  110  1  2   84  119    37 0.567   4.56
 2.03 Intr +  24897  25028  132  0  0  115   94    29 0.693   5.04
 2.04 Intr +  28319  28340   22  2  1   99   98     3 0.452  -0.97
 2.05 Intr +  29379  29483  105  2  0   46   80   111 0.562   5.59
 2.06 Term +  35094  35177   84  2  0   99   38    88 0.755   1.57
 2.07 PlyA +  35911  35916    6                               1.05

 3.13 PlyA -  36085  36080    6                               1.05
 3.12 Term -  41941  41853   89  2  2  130   43    52 0.130   1.74
 3.11 Intr -  48536  48410  127  2  1   38   79   118 0.212   5.23
 3.10 Intr -  57432  57305  128  1  2   26   98    53 0.009  -0.42
 3.09 Intr -  61171  60962  210  2  0   96  109    83 0.473   9.16
 3.08 Intr -  61814  61604  211  2  1   59   45    37 0.271  -5.94
 3.07 Intr -  62231  62144   88  1  1   50   66    95 0.431   2.55
 3.06 Intr -  62442  62261  182  0  2   90   76   165 0.549  13.24
 3.05 Intr -  62976  62748  229  2  1   61   16   194 0.511   6.45
 3.04 Intr -  63560  63275  286  0  1   55   68   229 0.524  13.08
 3.03 Intr -  63986  63572  415  2  1  -10   21   439 0.264  20.15
 3.02 Intr -  64333  64073  261  1  0   81   42   188 0.493  10.26
 3.01 Init -  75645  75592   54  0  0   95   43    47 0.431   2.23
 3.00 Prom -  75766  75727   40                              -6.95

 4.00 Prom +  81627  81666   40                              -2.55
 4.01 Init +  85873  85905   33  0  0   93   82   -11 0.471  -1.25
 4.02 Intr +  86676  86906  231  2  0   83   60   183 0.243  12.05
 4.03 Intr +  90757  90796   40  0  1   68   86    39 0.012  -1.42
 4.04 Intr +  98266  98430  165  2  0   53   46   111 0.063   2.41
 4.05 Term +  99963 100399  437  1  2   76   47   137 0.074   2.86
 4.06 PlyA + 100890 100895    6                               1.05

 5.02 PlyA - 101266 101261    6                               1.05
 5.01 Sngl - 109096 108737  360  1  0   70   38   291 0.526  18.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  92216  92028  189  2  0   72   42   206 0.960   9.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:138219898_138420832|GENSCAN_predicted_peptide_1|247_aa
MACNCPNSELRRSTGGARPQLDREHLSILHRLRRPSGGAMPPHRTSSGAREHLGTVARDD
PASFSSAPQERLGKLWLHGPRGCPRKGSYLGSHRTFSHHVRLFLAVTISQTLLLRTWNSV
RRIGQVFQDSQEGAHIRRETVSKSVCAEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQH
GGRVNLVFFIDTSYTANFSNCVITYKFQGPNLETNWHFHISPPPVDWQQTTVNLQPGSAR
GGASKTT

>gi568815589f:138219898_138420832|GENSCAN_predicted_CDS_1|744_bp
atggcgtgtaattgtccgaacagtgaacttcggagatccaccggaggggcgaggccacag
ctcgaccgcgagcacctgagcatcctgcaccgcctgcgacggccgtcagggggcgcgatg
ccgcctcacagaacctcaagcggcgcccgggaacacctggggaccgtggccagggacgac
ccagcctccttctcctcagctcctcaggaacgactggggaagctgtggcttcatggtccc
cgaggctgcccgaggaaaggatcctatctaggatcccataggacatttagtcatcatgtc
aggctcttcttggctgtgacaatctctcagactttacttctgaggacctggaacagtgtt
aggaggattggtcaggtatttcaggacagccaggagggggcgcacatccgccgcgaaact
gtgagcaagagcgtctgtgctgaaccatggcgccaccagagggcgcgcgatcccgcccca
accaacttcccgctgaagtgccagaagcagcgaggagcttcaacttcctcagggcagcac
gggggtcgtgttaatttggtgttcttcattgacacttcctatactgcaaacttttccaac
tgtgtgattacttataagttccagggaccaaaccttgaaacaaactggcacttccatatc
tctcccccaccagtagattggcagcagacaacagtcaatttacaacctggctctgcccgt
ggtggtgctagcaagaccacctaa

>gi568815589f:138219898_138420832|GENSCAN_predicted_peptide_2|179_aa
MDKTGFQELQAAAAAPPLSPSLPQTLVDFMMIIPHLLRDKDQRATTATSPRTCQCWGTEN
EGVQLWPSQSSGGDETHLPLSLWARLMPGASVDRGHAPGLPKLEKAARLRSEGQNSTGRV
IEKQLLLGFQRNGIIVSLIYVNKLKNCLKENMWDDAARRPLPDAGPSTLDFLTSRTVKK

>gi568815589f:138219898_138420832|GENSCAN_predicted_CDS_2|540_bp
atggacaaaacgggcttccaggagctacaggctgcagcagcagctcctcctctaagtcct
tcactgcctcaaactcttgttgactttatgatgattattccccaccttctaagagacaaa
gaccaacgagccaccacagccaccagtcccagaacctgccaatgctggggaacggaaaat
gagggagttcaactctggccctcacaatccagtggaggagacgaaactcatctgcctctg
tccctctgggcacgcctcatgccaggtgcatctgtggacaggggccatgctcctgggctt
ccaaagttggagaaagctgccaggctcaggtctgaaggccagaattctacaggacgtgtt
attgagaagcaacttttgcttggttttcagagaaatggaatcatcgtatcgctgatctac
gtaaacaaactgaagaattgtctgaaagaaaatatgtgggatgatgcagcaagaagaccc
ttaccagatgcaggcccctcaaccttggacttcctaacatccagaactgttaagaaataa

>gi568815589f:138219898_138420832|GENSCAN_predicted_peptide_3|759_aa
MKKCRAKGKESLIKPSNLPHEAQQPASHSVASNQRKQPAKLAAVAHERPPGGTGSVDPGQ
PPGATCPESPGPATPHTLGVVEPGKSSPPTMEEEPWAPQGSPCWTAQSLSALRKEQDSSS
EKDGRSPNKSDKDHIRWPMSGAHDLQQAAPGPGGAHQGHPNQDNRTVSQMLSERWYTLGP
NEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHKPGASRSVTRARGSGAYQRWALPLPLGCP
LNSSQTLQSSDTKEQLLWGRTAAHSQGTWLSLAQAFSHSGVHSLDGREIDRQALRELTQV
VSGTASYSGPKPSTQHGAPGHFAAPGEGGDPWAALLPPTFWQSMVTPCPPPTHTRMLPPQ
PWHPPPSYWAQEPSKPRSLVNAAERAPYGPNPWGWGPRDAFQGGLFPPNGSCHLLVEKPR
TGSGNRRPRRRCPLHCTYPGPVPALIMQLFQAHCFFLSTRPQPPSRPTMHTSSPPSPVGV
LTAPHLAQTLDAALAAPPLLLPESHPCLTPPQPAQALAQPWLPCHCLCPRVGALTAWLEG
DTPALPQHLGVSITSTGRWATPKIPGLTVPPENMDTVPGESWAVSLLRAPVHTMNCGTFR
AFHFSENSSCWGYKMECEEGLGPQGGACGLGGVHAPLLSPEGLDSGVGDPCSSASKTTLP
TPVFTVVKGSNHLAPKACASAGISSQSTPKQQSKTLSLKRKENKCKFLSLCECSQVGGEI
DNNKRALNNDRLGFNVTLTGSFSPSPEELPIALDACTII

>gi568815589f:138219898_138420832|GENSCAN_predicted_CDS_3|2280_bp
atgaagaagtgccgagcaaaggggaaagaatcccttataaaaccatcaaatctcccacac
gaggcccagcaacctgccagtcactcagtggcctccaaccagagaaaacaacctgccaag
ttggcagccgttgctcatgagcgtccaccaggtgggacagggagtgttgaccctgggcag
ccccctggagccacctgccctgaaagcccagggcccgcaaccccacacactttgggggtg
gtggaacctggtaaaagctcacctcccaccatggaggaggagccctgggcccctcagggg
agtccctgctggacagcccagtccctcagtgccctgcgcaaggaacaggactcatcttct
gagaaggatggacgcagccccaacaaatcagacaaggaccacatccggtggcccatgagt
ggcgctcatgatcttcagcaggcggcaccaggccctggcggggcgcaccagggtcatccc
aaccaggataaccggaccgtcagccagatgctgagcgagcggtggtacaccctggggccc
aatgagatgcagaaatacaacctggccttccaggtgaaggtggcccacttgcaacaagga
ccgaaagaagtccagctcagaggccaagcccacaagccaggggctagcaggagtgtaaca
agggctcgtgggagcggagcatatcagagatgggcactgccactgcccctggggtgtcct
ctgaactcctcccaaacactccagagctcggataccaaggagcagcttctgtggggcaga
acggctgcacacagtcagggaacctggctcagcctggcccaagccttctcccacagcggg
gtacacagcctggacggcagggaaatagaccgtcaggcactacgggaactgacacaggtg
gtgtctggcactgcatcatactctggcccaaagccttctactcagcatggagctccaggc
cactttgcagcccctggtgagggaggtgacccgtgggcagccctgctgccgcccaccttt
tggcagtctatggtcacaccctgtcctcctcctacacatactcggatgcttcctcctcaa
ccttggcacccacctccttcttactgggcccaggagccttcaaagcccaggagtctggtc
aacgcagcagagcgggccccctacggccccaacccctggggatgggggcccagggacgcc
ttccaaggtggcctgtttcctcccaatggatcctgccaccttctggtggagaagccgagg
acaggctcagggaaccggagaccgagaaggcgctgtcctcttcactgcacgtaccctgga
ccagtgccggccctgatcatgcagctcttccaggcccactgcttcttcctgtccactagg
ccacagccgccctccaggcccactatgcacacatcttcccctccaagccctgtgggggtc
ctgaccgcacctcacctggctcagactcttgacgctgccctggctgccccaccactgctt
ctgcccgagagtcacccctgcctgaccccacctcaacctgctcaggctctggcacaaccc
tggctgccctgccactgcctctgccccagagttggggccttgacagcctggttggaaggg
gacaccccagccctgcctcaacacctgggggtctccataactagcacaggcaggtgggca
accccaaagatcccaggactcacagtaccccctgagaacatggacactgtgccgggggaa
agctgggcagtttccctcctccgagcccctgtacataccatgaattgtgggaccttcaga
gcttttcacttttcggaaaatagctcctgctggggctacaagatggagtgtgaagagggc
cttgggccacagggaggcgcctgtggactagggggagttcatgcaccccttctttcccca
gaggggctggactcaggggttggggacccctgctcaagtgcatccaaaacgacccttccc
acaccagtcttcacagtggtcaagggcagcaaccacttagctcccaaggcatgtgcctca
gctggcatttcgtcacaatcaacacctaagcaacagagcaagacgctgtctctgaaaagg
aaagaaaacaaatgcaagtttttatcactttgtgagtgtagccaagttggaggagaaata
gacaataataaaagagcactgaataatgacagacttggcttcaatgtcaccttaactgga
agcttctctccctctccagaagagcttccgattgcacttgatgcatgcactattatttga

>gi568815589f:138219898_138420832|GENSCAN_predicted_peptide_4|301_aa
MVVRPPHPPGNPRDLVLCVPAAPATAKRGQGTAQAMASEGASLKLWQLPCGVEPVDSRKS
RIEVWEPPPRFQRMYGNAWISRQKFAAGILVKGYCGGGAGGMPQHLAIHVHLISCLHADL
HYPDGQYLWLFLLPHPVHRLLVVKVCILRLWTVSSRVLIILATAQLAGPMDGENHSVVSE
FLFLGLTHSWEIQLLLLVFSSVLYVASITGNILIVFSVTTDPHLHSPMYFLLVSLSFIDL
GACSVTSPKMIYDLFRKRKVISFGGCIAQIFFIHVIGGVEMVLLIAMAFDSYVALLSPST
I

>gi568815589f:138219898_138420832|GENSCAN_predicted_CDS_4|906_bp
atggttgtgaggcctccccatccacctggaaatcctagggacttggtgctctgtgtccca
gctgctccagccacagctaaaaggggtcaaggtacagctcaggccatggcttcagagggt
gcaagcctcaagctttggcagcttccatgtggtgttgagcctgtggattcacggaagtcc
agaatcgaggtatgggaacctccacctagatttcagagaatgtatggaaatgcctggatc
tccagacagaagtttgctgcagggatacttgtgaaaggatattgtggaggaggagctggg
ggtatgcctcagcaccttgctattcatgttcatctgatcagttgtttgcatgctgactta
cattaccctgatgggcagtacctgtggctgtttctgctccctcacccagtccataggctt
ctggttgtaaaagtgtgcatcttgagactgtggacagttagctccagagttctcataatt
ttagccacagcccagttggctggaccaatggatggagagaatcactcagtggtatctgag
tttttgtttctgggactcactcattcatgggagatccagctcctcctcctagtgttttcc
tctgtgctctatgtggcaagcattactggaaacatcctcattgtgttttctgtgaccact
gaccctcacttacactcccccatgtactttctactggtcagtctctccttcattgactta
ggagcctgctctgtcacttctcccaagatgatttatgacctgttcagaaagcgcaaagtc
atctcctttggaggctgcatcgctcaaatcttcttcatccacgtcattggtggtgtggag
atggtgctgctcatagccatggcctttgacagttatgtggccctattaagcccctccact
atctga

>gi568815589f:138219898_138420832|GENSCAN_predicted_peptide_5|119_aa
MRTSCSMHKDQALIRSSGRKISETEYQLNEINQEDKIREKRMKRNEQSLQEIWDYVKRPN
LRLIAVPESDGENGTKLENTLRDIIQENFPNLARQANIQIQKYGEHHKDTPQEKQPQDT

>gi568815589f:138219898_138420832|GENSCAN_predicted_CDS_5|360_bp
atgagaacttcatgcagcatgcacaaggatcaagcactgattcggtcaagcggaagaaag
atatcagagactgaatatcaacttaatgaaataaatcaagaagacaagattagagaaaaa
agaatgaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaacgaccaaat
ctacgtttgattgctgtacctgaaagtgatggggagaatggaaccaagttagaaaacact
cttcgggatattatccaggagaacttccctaacctagcaaggcaggccaatattcaaatt
cagaaatatggagaacatcacaaagacactcctcaagaaaagcaaccccaagacacatag