GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:00:50

Sequence gi568815588r:91707182_91907439 : 200258 bp : 38.79% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9151   9203   53  0  2  114  119    13 0.812   7.68
 1.02 Intr +  32081  32198  118  2  1  101   96    45 0.064   6.15
 1.03 Term +  32947  33396  450  0  0   38   51   204 0.049   5.90
 1.04 PlyA +  34948  34953    6                               1.05

 2.00 Prom +  36872  36911   40                              -7.85
 2.01 Sngl +  43342  44154  813  0  0   88   43   585 0.805  49.52
 2.02 PlyA +  44218  44223    6                               1.05

 3.00 Prom +  44742  44781   40                              -6.15
 3.01 Init +  44835  45872 1038  2  0   61   41   518 0.297  38.43
 3.02 Intr +  46697  46864  168  1  0   26   86   122 0.175   5.02
 3.03 Term +  51311  51316    6  1  0  131   33     0 0.102  -4.31
 3.04 PlyA +  54038  54043    6                               1.05

 4.02 PlyA -  55484  55479    6                               1.05
 4.01 Sngl -  59327  59022  306  2  0   85   43   321 0.974  20.92
 4.00 Prom -  65330  65291   40                              -3.05

 5.00 Prom +  70565  70604   40                              -3.45
 5.01 Init +  91510  91708  199  0  1   69   91   343 0.834  29.81
 5.02 Intr +  91976  92077  102  0  0   90   86    67 0.205   5.93
 5.03 Intr + 105802 106026  225  2  0   68   91   249 0.998  20.23
 5.04 Intr + 109953 110048   96  1  0   68  119   114 0.940  11.56
 5.05 Intr + 112089 112125   37  1  1  102   98    36 0.917   2.40
 5.06 Intr + 112301 112376   76  2  1   72   75    57 0.709   1.40
 5.07 Intr + 112758 112852   95  2  2   36   98    66 0.492   0.24
 5.08 Intr + 115115 115181   67  2  1   68   96    34 0.453   0.19
 5.09 Intr + 119836 120022  187  0  1   85   84    37 0.656   1.34
 5.10 Intr + 121104 121225  122  1  2   75   23   138 0.736   5.29
 5.11 Intr + 123742 123833   92  0  2   18   89    48 0.696  -4.23
 5.12 Intr + 123922 124000   79  1  1   70   69   117 0.845   6.63
 5.13 Intr + 126672 126843  172  2  1   73   62    66 0.833   1.09
 5.14 Intr + 129738 129817   80  1  2  113   69    46 0.952   3.55
 5.15 Intr + 133380 133525  146  2  2   92   61   149 0.977  10.76
 5.16 Intr + 134102 134267  166  2  1   76   76   127 0.999   9.34
 5.17 Intr + 134991 135210  220  2  1   54  111   130 0.999   8.85
 5.18 Intr + 137738 137847  110  0  2   40   98    97 0.974   4.98
 5.19 Intr + 138571 138759  189  0  0   77   89   224 0.998  20.26
 5.20 Intr + 141202 141454  253  0  1   51   76   217 0.666  12.88
 5.21 Intr + 142331 142413   83  0  2   74  109     8 0.797  -0.06
 5.22 Intr + 144035 144155  121  1  1   32   63   126 0.819   3.65
 5.23 Intr + 147848 147945   98  0  2   78   87    77 0.996   5.41
 5.24 Intr + 148433 148507   75  1  0   61   85    56 0.724   1.39
 5.25 Intr + 150244 150349  106  0  1   74   95   105 0.997   8.67
 5.26 Intr + 152281 152467  187  2  1   82  110    73 0.997   6.73
 5.27 Intr + 154818 154974  157  0  1  116   95    66 0.992   9.19
 5.28 Intr + 176610 176704   95  2  2   89   23   103 0.088   1.74
 5.29 Intr + 178107 178229  123  0  0  110   40   100 0.011   6.18
 5.30 Intr + 182775 182965  191  0  2   46   53   151 0.015   5.71
 5.31 Term + 187237 187481  245  2  2   21   43   168 0.010   0.68
 5.32 PlyA + 187557 187562    6                               1.05

 6.02 PlyA - 187671 187666    6                               1.05
 6.01 Term - 190062 189752  311  1  2   11   50   205 0.194   3.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 100258  99998  261  1  0  108   42   233 0.931  15.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:91707182_91907439|GENSCAN_predicted_peptide_1|206_aa
MPVQDGLFLKKTNKTYLWSSLHFLKLNVGLSSEVGTLFIDDILKYVFQVAGFLPLFQKSA
ALEGPMCSWTAGNNNPNGWYQPKHFIRLVTAGSVLIHMCQQHQQNGRVHTCQLGWSSGRH
GAASLFTCIHSNSNGSVSQEQDHWHPCVCSHWWWCWCQGRVLACTGLPASMHSFMPAAMA
ALVGGWGHTGFSVHVHTGNSSAAVDM

>gi568815588r:91707182_91907439|GENSCAN_predicted_CDS_1|621_bp
atgcccgtccaagatggtttatttttaaagaagaccaataaaacttacctctggagttct
ctgcattttctgaaattgaatgttggcctctctagtgaagtgggaacacttttcatagat
gatatcctcaaatatgttttccaagttgctggctttctgcctctctttcagaaatctgct
gcactagagggaccaatgtgttcctggactgctggcaacaataaccccaatgggtggtac
cagccaaagcacttcataaggttggtgacagcaggatctgtgctcattcacatgtgccag
cagcaccagcagaatggcagggtgcacacttgtcagctggggtggagctctggtaggcat
ggggctgccagcctctttacatgcattcacagcaacagcaatggcagtgtgagtcaggaa
caggaccactggcatccatgtgtgtgttcacattggtggtggtgttggtgccaaggcagg
gtgctggcctgcacaggactgccagcctctatgcactcattcatgccagcagcaatggca
gcattggttggaggatggggccacactggcttctcagtgcatgttcacactggcaatagc
agtgcagcagtggacatgtga

>gi568815588r:91707182_91907439|GENSCAN_predicted_peptide_2|270_aa
MGKKQSRKTGNSKKQSTSPPPKEGSSSPATEQSWTGNDFDELREEGFRRSNYSELQEDIQ
TKGKEVENFEKNLEECITTITNTEKYLKELMELKTKARELREECRSFRSQCNQLEERVPA
MKDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPSLARQANIQIQEIQRTPQRYSSRRATPRHIIVRLTKVEMKEKMLRAARERSGY
PQREAHQTNSRSLGRNSTSQKRVGANIQHS

>gi568815588r:91707182_91907439|GENSCAN_predicted_CDS_2|813_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcacctctcctcct
ccaaaggaaggcagttcctcaccagcaacggaacaaagctggacagggaatgactttgac
gagctgagagaagaaggcttcagaagatcaaattactctgagctacaggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactacaata
accaatacagagaagtacttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcttcaggagccaatgcaatcaactggaagaaagggtaccagcg
atgaaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaacgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagcgacggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccagtctagcaaggcaggccaacattcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttgaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagaaaggtcgggttac
ccacaaagggaagcccatcagactaacagcagatctctcggcagaaactctacaagccag
aagagagtgggggccaatattcaacattcttaa

>gi568815588r:91707182_91907439|GENSCAN_predicted_peptide_3|403_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALRQADLIDIYRTLHPKSTEYTFFSAPRHTYS
KIDHILGSKALLSKCKRTEIITNCLSDHSAIKLELRIKNLTQNHSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIK
KKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLN
QEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELRIKYLGIQLTRDVK
DLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKN

>gi568815588r:91707182_91907439|GENSCAN_predicted_CDS_3|1212_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcgccaagcggacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacgccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaaccactcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctggcaagactaataaag
aaaaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccact
gatcccacagaaatacaaactaccatcagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacactctccccagactaaac
caggaagaagttgaatctctgaatagaccaataacaggatctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggattcacagctgaattctaccag
aggtacaaggaggaactgagaataaaatacctaggaatccaacttacaagggacgtgaag
gacctcttcaaggagaactacaaaccactgctcaacgaaataaaagaggatacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactg
cccaagaattag

>gi568815588r:91707182_91907439|GENSCAN_predicted_peptide_4|101_aa
MVMLKDQRMTVVGWLEGLLQLDDLINQLTSIMDTNQTYLVSECLEREERNQTQVLRQKQD
EAYLASPRADQEKEMKKWEEWELKQQKEEEVQEQKLAEKRW

>gi568815588r:91707182_91907439|GENSCAN_predicted_CDS_4|306_bp
atggtgatgctgaaggatcagcggatgactgtggtgggatggctagaaggcctccttcaa
ctggatgacctcattaaccaactgacatctatcatggatacaaaccagacttacctggtg
tcagaatgcctggaaagggaagaaagaaaccagacccaggtgttgagacaaaagcaggat
gaggcctacctggcttctcccagggctgaccaggagaaagaaatgaagaaatgggaggag
tgggagcttaagcagcagaaggaggaggaggtgcaagagcaaaagctggcagagaagaga
tggtag

>gi568815588r:91707182_91907439|GENSCAN_predicted_peptide_5|1397_aa
MSGRRCAGGGAACASAAAEAVEPAARELFEACRNGDVERVKRLVTPEKVNSRDTAGRKST
PLHFAAVSTIPVPTSGLVTLEGLYTQERVGDVVDRPYDLKGFGRKDVVEYLLQNGANVQA
RDDGGLIPLHNACSFGHAEVVNLLLRHGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQH
GAEPTIRNTDGRTALDLADPSAKAVLTGEYKKDELLESARSGNEEKMMALLTPLNVNCHA
SDGRKSTPLHLAAGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKH
GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTPQLKERL
AYEFKGHSLLQAAREADVTRIKKHLSLEMVNFKHPQTHETALHCAAASPYPKRKQICELL
LRKGANINEKTKEFLTPLHVASEKAHNDVVEVVVKHEAKVNALDNLGQTSLHRAAYCGHL
QTCRLLLSYGCDPNIISLQGFTALQMGNENVQQLLQEGISLGNSEADRQLLEAAKAGDVE
TVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA
CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN
TPLDLVKDGDTDIQDLLRGDAALLDAAKKGCLARVKKLSSPDNVNCRDTQGRHSTPLHLA
AGYNNLEVAEYLLQHGADVNAQDKGGLIPLHNAASYGHVDVAALLIKYNACVNATDKWAF
TPLHEAAQKGRTQLCALLLAHGADPTLKNQEGQTPLDLVSADDVSALLTAAMPPSALPSC
YKPQVLNGVRSPGATADALSSGPSSPSSLSAASSLDNLSGSFSELSSVVSSSGTEGASSL
EKKEVPGVDFSITQFVRNLGLEHLMDIFEREQITLDVLVEMGHKELKEIGINAYGHRHKL
IKGVERLISGQQGLNPYLTLNTSGSGTILIDLSPDDKEFQSVEEEMQSTVREHRDGGHAG
GIFNRYNILKIQKVCNKKLWERYTHRRKEVSEENHNHANERMLFHGSPFVNAIIHKGFDE
RHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPVHKDRSCYICHRQLLFCRVTLGKS
FLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGEQALRHVRSASTAQGFVLIMHY
GLASEAQTPYRLFQFSISSFRKPAGILLLPPSSHSCDPEPVEYRSLRGSCSTWRWSSGGN
AHSLATHLLLCGPVPNRPSSTRRLGIPAQYDILPLRLLASPEPSLYLIREEPVKLGVIRR
PKPLPVVLCFNAHAPGPLSCSSCTPGSSLKFVVDGGRRNSESLKVFDLSYKCIEENADVC
CLLSLLQLHKRESTPVL

>gi568815588r:91707182_91907439|GENSCAN_predicted_CDS_5|4194_bp
atgtcgggtcgccgctgcgccggcgggggagcggcctgcgcgagcgccgcggccgaggcc
gtggagccggccgcccgagagctgttcgaggcgtgccgcaacggggacgtggaacgagtc
aagaggctggtgacgcctgagaaggtgaacagccgcgacacggcgggcaggaaatccacc
ccgctgcacttcgccgcagtatcaacaatacctgtaccaacttccggtcttgttacccta
gaaggcctctacacacaagaaagagtaggggacgtagttgatagaccttatgatttaaaa
ggttttgggcggaaagacgtagttgaatatttgcttcagaatggtgcaaatgtccaagca
cgtgatgatgggggccttattcctcttcataatgcatgctcttttggtcatgctgaagta
gtcaatctccttttgcgacatggtgcagaccccaatgctcgagataattggaattatact
cctctccatgaagctgcaattaaaggaaagattgatgtttgcattgtgctgttacagcat
ggagctgagccaaccatccgaaatacagatggaaggacagcattggatttagcagatcca
tctgccaaagcagtgcttactggtgaatataagaaagatgaactcttagaaagtgccagg
agtggcaatgaagaaaaaatgatggctctactcacaccattaaatgtcaactgccacgca
agtgatggcagaaagtcaactccattacatttggcagcaggatataacagagtaaagatt
gtacagctgttactgcaacatggagctgatgtccatgctaaagataaaggtgatctggta
ccattacacaatgcctgttcttatggtcattatgaagtaactgaacttttggtcaagcat
ggtgcctgtgtaaatgcaatggacttgtggcaattcactcctcttcatgaggcagcttct
aagaacagggttgaagtatgttctcttctcttaagttatggtgcagacccaacactgctc
aattgtcacaataaaagtgctatagacttggctcccacaccacagttaaaagaaagatta
gcatatgaatttaaaggccactcgttgctgcaagctgcacgagaagctgatgttactcga
atcaaaaaacatctctctctggaaatggtgaatttcaagcatcctcaaacacatgaaaca
gcattgcattgtgctgctgcatctccatatcccaaaagaaagcaaatatgtgaactgttg
ctaagaaaaggagcaaacatcaatgaaaagactaaagaattcttgactcctctgcacgtg
gcatctgagaaagctcataatgatgttgttgaagtagtggtgaaacatgaagcaaaggtt
aatgctctggataatcttggtcagacttctctacacagagctgcatattgtggtcatcta
caaacctgccgcctactcctgagctatgggtgtgatcctaacattatatcccttcagggc
tttactgctttacagatgggaaatgaaaatgtacagcaactcctccaagagggtatctca
ttaggtaattcagaggcagacagacaattgctggaagctgcaaaggctggagatgtcgaa
actgtaaaaaaactgtgtactgttcagagtgtcaactgcagagacattgaagggcgtcag
tctacaccacttcattttgcagctgggtataacagagtgtccgtggtggaatatctgcta
cagcatggagctgatgtgcatgctaaagataaaggaggccttgtacctttgcacaatgca
tgttcttatggacattatgaagttgcagaacttcttgttaaacatggagcagtagttaat
gtagctgatttatggaaatttacacctttacatgaagcagcagcaaaaggaaaatatgaa
atttgcaaacttctgctccagcatggtgcagaccctacaaaaaaaaacagggatggaaat
actcctttggatcttgttaaagatggagatacagatattcaagatctgcttaggggagat
gcagctttgctagatgctgccaagaagggttgtttagccagagtgaagaagttgtcttct
cctgataatgtaaattgccgcgatacccaaggcagacattcaacacctttacatttagca
gctggttataataatttagaagttgcagagtatttgttacaacacggagctgatgtgaat
gcccaagacaaaggaggacttattcctttacataatgcagcatcttacgggcatgtagat
gtagcagctctactaataaagtataatgcatgtgtcaatgccacggacaaatgggctttc
acacctttgcacgaagcagcccaaaagggacgaacacagctttgtgctttgttgctagcc
catggagctgacccgactcttaaaaatcaggaaggacaaacacctttagatttagtttca
gcggatgatgtcagcgctcttctgacagcagccatgcccccatctgctctgccctcttgt
tacaagcctcaagtgctcaatggtgtgagaagcccaggagccactgcagatgctctctct
tcaggtccatctagcccatcaagcctttctgcagccagcagtcttgacaacttatctggg
agtttttcagaactgtcttcagtagttagttcaagtggaacagagggtgcttccagtttg
gagaaaaaggaggttccaggagtagattttagcataactcaattcgtaaggaatcttgga
cttgagcacctaatggatatatttgagagagaacagatcactttggatgtattagttgag
atggggcacaaggagctgaaggagattggaatcaatgcttatggacataggcacaaacta
attaaaggagtcgagagacttatctccggacaacaaggtcttaacccatatttaactttg
aacacctctggtagtggaacaattcttatagatctgtctcctgatgataaagagtttcag
tctgtggaggaagagatgcaaagtacagttcgagagcacagagatggaggtcatgcaggt
ggaatcttcaacagatacaatattctcaagattcagaaggtttgtaacaagaaactatgg
gaaagatacactcaccggagaaaagaagtttctgaagaaaaccacaaccatgccaatgaa
cgaatgctatttcatgggtctccttttgtgaatgcaattatccacaaaggctttgatgaa
aggcatgcgtacataggtggtatgtttggagctggcatttattttgctgaaaactcttcc
aaaagcaatcaatatgtatatggaattggaggaggtactgggtgtccagttcacaaagac
agatcttgttacatttgccacaggcagctgctcttttgccgggtaaccttgggaaagtct
ttcctgcagttcagtgcaatgaaaatggcacattctcctccaggtcatcactcagtcact
ggtaggcccagtgtaaatggcctagcattagctgaatatgttatttacagaggagaacag
gctttgcgtcatgttaggtcagcttccactgctcagggctttgtgctgatcatgcattac
gggttggcttcagaggcacagacaccttaccgcctgtttcagtttagcatttcttccttc
aggaaacctgccggaattctccttcttcccccgtcttcacacagctgtgaccccgaaccc
gtggagtatcgctccttgaggggctcctgcagcacctggaggtggagctcaggcggtaat
gcccactcgctggccactcacctcctgctgtgcggcccagttcctaacaggccaagctca
acccggaggttggggatccctgctcagtacgacatactacctttgagacttttagcttct
ccagagccctccctttatttaatacgtgaagagcctgtaaaattgggagtcatccggagg
cctaaacccctccctgtggtgctgtgcttcaatgcgcacgctcctggtccactttcatgt
tcctcctgtactcccggttcctctttgaagttcgtagtagatggcggtcgaagaaatagt
gaaagtcttaaagtctttgatctttcttataagtgcatagaagaaaatgctgacgtatgc
tgccttctctctctccttcagctacataaaagggaaagcacccctgtcctatga

>gi568815588r:91707182_91907439|GENSCAN_predicted_peptide_6|103_aa
XCFHAADKDIPETGKKKRFNWTYSSIWLPRPQNHGGRQKALLTWQQQEKMRKIQKRKPLI
NPSDLVRLIRYHKNNRGNCLHDSNYLSPGPSHNKWELEEYSSR

>gi568815588r:91707182_91907439|GENSCAN_predicted_CDS_6|312_bp
ntctgttttcatgctgctgataaagacataccagagactgggaagaaaaagaggtttaat
tggacttacagttccatatggctgccgaggcctcagaatcatggcgggaggcaaaaggca
cttcttacatggcagcagcaagagaaaatgaggaagatccaaaagcggaaacccctgata
aacccatcagatctcgtgagacttattcgctaccacaagaacaataggggaaactgcctc
catgattcaaattatctctcaccaggtccctcccacaacaagtgggaattagaggagtac
agttcaagatga