GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:38:09

Sequence gi568815588r:87761954_87962487 : 200534 bp : 36.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    432    427    6                               1.05
 1.05 Term -  10120  10011  110  2  2  105   41    85 0.371   3.19
 1.04 Intr -  22717  22517  201  2  0   76   57   228 0.805  16.84
 1.03 Intr -  28477  28357  121  1  1   62   86    77 0.990   4.05
 1.02 Intr -  30802  30704   99  1  0   72   50    90 0.830   2.99
 1.01 Init -  52646  52485  162  2  0   62   80   184 0.884  14.78
 1.00 Prom -  53152  53113   40                              -7.35

 2.00 Prom +  53926  53965   40                              -4.25
 2.01 Sngl +  55707  55919  213  2  0   68   47   235 0.831  12.33
 2.02 PlyA +  57745  57750    6                               1.05

 3.00 Prom +  79940  79979   40                              -2.75
 3.01 Init +  81917  82144  228  1  0  100   70   364 0.537  34.22
 3.02 Term +  82183  82365  183  0  0   18   37   194 0.783   3.86
 3.03 PlyA +  82838  82843    6                               1.05

 4.00 Prom +  83400  83439   40                              -6.55
 4.01 Init +  83450  83480   31  1  1   40   92    36 0.240  -0.62
 4.02 Intr +  87218  87349  132  0  0  106   50   107 0.226   8.40
 4.03 Intr +  97695  97776   82  1  1   21  103    57 0.084  -1.72
 4.04 Intr + 101011 101160  150  1  0   22   91   132 0.335   5.26
 4.05 Term + 101796 102657  862  0  1   10   42   553 0.305  34.11
 4.06 PlyA + 103007 103012    6                               1.05

 5.02 PlyA - 104246 104241    6                               1.05
 5.01 Sngl - 138130 137189  942  1  0   42   47   411 0.979  28.67
 5.00 Prom - 139584 139545   40                              -6.15

 6.02 PlyA - 139680 139675    6                               1.05
 6.01 Sngl - 141006 140371  636  0  0   88   44   504 0.895  41.93
 6.00 Prom - 142550 142511   40                              -7.65

 7.00 Prom + 143165 143204   40                              -4.05
 7.01 Init + 153391 153513  123  0  0   56   76    80 0.059   2.59
 7.02 Intr + 171098 171298  201  1  0   34  115   155 0.253  11.36
 7.03 Intr + 183671 183971  301  1  1   10  110   299 0.293  19.68
 7.04 Intr + 195900 196066  167  1  2   45   76    76 0.720   0.86
 7.05 Intr + 198941 199165  225  1  0  125   86   116 0.765  12.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:87761954_87962487|GENSCAN_predicted_peptide_1|230_aa
MVHAEAFSRPLSRNEVVGLIFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMK
QIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENS
RLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSL
AIKLQPSIIFIDEIGGKLSQLIESNWALRLLNVIQCRVEVGYKIWIISEM

>gi568815588r:87761954_87962487|GENSCAN_predicted_CDS_1|693_bp
atggtacatgctgaagccttttctcgtcctttgagtcggaatgaagttgttggtttaatt
ttccgtttgacaatatttggtgcagtgacatactttactatcaaatggatggtagatgca
attgatccaaccagaaagcaaaaagtagaagctcagaaacaggcagaaaaactaatgaag
caaattggagtgaaaaatgtgaagctctcagaatatgaaatgagtattgctgctcatctt
gtagaccctcttaatatgcatgttacttggagtgatatagcaggtttagatgatgtcatt
acggatctgaaagacacagtcatcttacctatcaaaaagaaacatttgtttgagaattcc
aggcttctgcagcctccaaaaggtgttcttctctatgggcctccaggctgtggtaaaacg
ttgattgccaaggccacagccaaagaagcaggctgtcgatttattaaccttcagccttcg
acactgaccgataagtggtatggagaatctcagaaattggctgctgctgtcttctccctt
gccataaagctacaaccatccatcatctttatagatgaaataggtggcaaactctcacag
ttaattgaaagtaattgggctctgaggctcctgaatgtcattcagtgtagagtagaagta
ggatataagatttggattatttcagaaatgtaa

>gi568815588r:87761954_87962487|GENSCAN_predicted_peptide_2|70_aa
MKACQSSQRGQVIINITIFCESVPGPEEPPSILHKVVAAPVRQSDLVHSSRLRLGSPGSE
VFRDDLKPPQ

>gi568815588r:87761954_87962487|GENSCAN_predicted_CDS_2|213_bp
atgaaggcctgccaatcttcacaaagagggcaggttattattaacatcaccatcttttgt
gaaagcgtgcccggccctgaagaaccaccttcgattttgcacaaggtggtggccgcgcct
gtgcgacaatcagacctggttcattccagccgccttcgtctaggttcgcctggttctgaa
gtcttccgggacgacctcaaacccccacagtga

>gi568815588r:87761954_87962487|GENSCAN_predicted_peptide_3|136_aa
MGSHVAVFDDVIKVFSDMKVCKSSTLEKVKKRKKLLLFCLSEYKKYIILAEAKKILVSNV
DQTIDDPYATFVKMLTDSKKKDLVFIFWASESASIKSKMIYASSKDVIKKQLGVSTVVFL
EGKLCDPLQRPSWRIY

>gi568815588r:87761954_87962487|GENSCAN_predicted_CDS_3|411_bp
atgggctcccatgtggctgtctttgatgatgtcatcaaggtgttcagtgacatgaaagtg
tgcaagtcttcaacactagaaaaggtgaagaagcgcaagaagttgctgctcttctgcctg
agtgagtacaagaagtacatcatccttgcggaggccaagaagatcctggtaagtaatgtg
gaccaaaccattgatgatccctatgccacttttgtcaagatgctgacagacagcaagaag
aaggacctggtgtttatcttctgggcctctgagtctgcatccattaagagcaaaatgatc
tatgccagctccaaagacgtcatcaagaagcagctaggggtcagcactgtcgtcttcttg
gagggcaaactttgtgatcccctccagcgcccttcctggagaatctactag

>gi568815588r:87761954_87962487|GENSCAN_predicted_peptide_4|418_aa
MELAGLEVALGEVGKQWSYEWQQPMAWGCTLGASQDKDAMSRKEISEMTYGSEPFTLKLY
IIVPLLQASTSPYGILVLNPDSGAKGKSECSPRRGNLGVEARGEGIPLAGTVPAFPSTLS
SVVTWSFSPVHSACEQPRGQRPRGAGRPAAAAAAAFLASSSSFLTVQPLPRLLLKGKVEA
VGSGGSRLRRGGGGGTSRSWSGGEKRRRRRPRRLQLQGGGLSRLSPFPGLGTPESWSLPF
YCLQHGGGGGWHIQGPGPVLNLPCAAAAPPVARAPEAAGGGSRSEDYSSSPHSAAAAARP
LAAEEKQAQSLQPSSSRRSSHYPAAVQSQAAAERGASATAKSRAISILQKKPRHQQLLPS
LSSFFFSHRLPDMTAIIKEIVSRNKRRYQEDGFDLDLTCIHFCGCSSLPFCHSLRTWE

>gi568815588r:87761954_87962487|GENSCAN_predicted_CDS_4|1257_bp
atggagcttgcaggactggaagttgctctgggtgaggtaggaaaacagtggtcctatgag
tggcagcagccaatggcctggggctgcaccctgggagctagccaagacaaagatgccatg
tccagaaaagaaatttcagaaatgacttatggctcagagccattcaccctgaagctttat
ataattgtccctttgttacaagcttctacttctccctatggtattctggttctgaatcca
gacagcggtgcaaaaggaaagagcgaatgcagtccacgccgcggaaatctaggggtagag
gcaaggggggagggtattccccttgcagggaccgtccctgcatttccctctacactgagc
agcgtggtcacctggtccttttcacctgtgcacagcgcctgtgagcagccgcgggggcag
cgccctcggggagccggccggcctgcggcggcggcagcggcggcgtttctcgcctcctct
tcgtcttttctaaccgtgcagcctcttcctcggcttctcctgaaagggaaggtggaagcc
gtgggctcgggcgggagccggctgaggcgcggcggcggcggcggcacctcccgctcctgg
agcgggggggagaagcggcggcggcggcggccgcggcggctgcagctccagggagggggt
ctgagtcgcctgtcaccatttccagggctgggaacgccggagagttggtctctccccttc
tactgcctccaacacggcggcggcggcggctggcacatccagggacccgggccggtttta
aacctcccgtgcgccgccgccgcaccccccgtggcccgggctccggaggccgccggcgga
ggcagccgttcggaggattattcgtcttctccccattccgctgccgccgctgccaggcct
ctggctgctgaggagaagcaggcccagtcgctgcaaccatccagcagccgccgcagcagc
cattacccggctgcggtccagagccaagcggcggcagagcgaggggcatcagctaccgcc
aagtccagagccatttccatcctgcagaagaagccccgccaccagcagcttctgccatct
ctctcctcctttttcttcagccacaggctcccagacatgacagccatcatcaaagagatc
gttagcagaaacaaaaggagatatcaagaggatggattcgacttagacttgacctgtatc
catttctgcggctgctcctctttacctttctgtcactctcttagaacgtgggagtag

>gi568815588r:87761954_87962487|GENSCAN_predicted_peptide_5|313_aa
MIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTASIILNGQKLEAFPLK
TGTRQGRPLSPLLFNTVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLESPTVS
AQNLLQLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPLTTATKRIKYLGIQLT
RDVKDLFKNYKPLLNEIKDDTNKWKNIPCSWVGRINIVKMATLPKVIYRNNAIPIKLPIN
FFTELEKTTLKFIWSQKRARTAKTILSRKKKAGGITLPDFKLYYKATVTKTAWYWYQNRD
IDQWNRTEPSEIT

>gi568815588r:87761954_87962487|GENSCAN_predicted_CDS_5|942_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacagcccttcatgcta
aaaactctcaataaattaggtattgatggaacgtatctcaaaataataagagctatttat
gacaaacccacagccagtatcatactgaatgggcaaaaactggaagcattccctttgaaa
actggcacaagacagggacgccctctctcaccactcctattcaacacagtgttggaagtt
ctggccagggcaatcaggcaagagaaagaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatttagaaagccccactgtctca
gcccaaaatctccttcagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcttatacaccaataacagacagacagagagccaaatcatg
agtgaactcccactcacaactgctacaaagagaataaaatacctaggaatccaacttaca
agggatgtgaaggacctgttcaagaactacaaaccactgctcaacgaaataaaagatgac
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatg
gccacactgcccaaggtaatttatagaaacaatgccatccccatcaagctaccaataaat
ttcttcacagaattggaaaaaactactttaaagttcatatggagccaaaaaagagcccgc
actgccaagacaatcctaagcagaaagaaaaaagctggaggcatcacactacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagat
atagaccaatggaacagaacagagccctcagaaataacatga

>gi568815588r:87761954_87962487|GENSCAN_predicted_peptide_6|211_aa
MGRKQSRKAENSKTQSASSPPKDHSSSPAMEQSWMKNDFDELTEVGFRRSVVTNFSELKE
DVQTHRKEAKNLEKRLDKWLTRINSVQKTINDLMELKIMARELHDACTSFSSRFDQVEER
VSVIADQMNEMKQEEKFREKTVKRNEQSLQEIWDYVKRPNLRLIGVLDSDGENGTKLENT
LQDIIQENFPNIARHANIQIQGIQRPPQRYS

>gi568815588r:87761954_87962487|GENSCAN_predicted_CDS_6|636_bp
atggggagaaaacagagcagaaaagctgaaaattctaaaacccagagtgcctcttctcct
ccaaaggatcacagctcctcaccagcaatggaacaaagctggatgaagaatgactttgac
gagttgacagaagtaggcttcagaaggtcagtagtaacaaacttctccgagctaaaggag
gatgttcaaacccatcgcaaggaagctaaaaatcttgaaaaaagattagacaaatggcta
actagaataaacagtgtacagaagaccataaatgacctgatggagctgaaaatcatggct
cgagaactacatgacgcatgcacaagcttcagcagccgattcgatcaagtggaagaaagg
gtatcagtaattgcagatcaaatgaatgaaatgaagcaagaagagaagtttagagaaaaa
acagtaaaaagaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaat
ctacgtttgattggtgtacttgacagtgacggggagaatggaaccaagctggaaaacact
cttcaggatattatccaggagaacttccccaacatagcaaggcacgccaacattcaaatt
cagggaatacagagaccaccacaaagatactcctag

>gi568815588r:87761954_87962487|GENSCAN_predicted_peptide_7|339_aa
MKTDFLTLLMGASRASLLQVSGSVTCRRHQGFGPAWSECCPLELIKPFCEDLDQWLSEDD
NHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKLTGQNQVFSKAR
YTVSAFGNRRNEKTVVCCTVRGAKADEILENDLKVQECELRKNNFSDTGNFGFGTQEHID
LGIRYDPSIDVYSLDFYVVLEKPGFIIADPQFVVCQLKVKIYSSNSGPTRREDKFMYFEF
PQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEETSEKVENGSLCDQEIDSI
CSIERADNDKEYLVLTLTKNDLDKANKDKANRYFSPNFK

>gi568815588r:87761954_87962487|GENSCAN_predicted_CDS_7|1017_bp
atgaagacagattttctcaccctgcttatgggtgcttctcgtgctagccttttgcaagtg
tcgggaagtgtaacctgcaggaggcatcagggctttgggcctgcatggtctgagtgctgc
cctctagaacttatcaaacccttttgtgaagatcttgaccaatggctaagtgaagatgac
aatcatgttgcagcaattcactgtaaagctggaaagggacgaactggtgtaatgatatgt
gcatatttattacatcggggcaaatttttaaaggcacaagaggccctagatttctatggg
gaagtaaggaccagagacaaaaagcttacaggtcagaaccaggtgttttccaaagctaga
tatactgttagcgcctttggcaacagaagaaatgaaaagactgttgtctgctgcacagtt
cgaggggccaaggcagacgaaatcctggagaatgatctaaaggtgcaggagtgtgagtta
agaaaaaataacttctcagatactggaaactttggttttgggacccaggaacacattgat
ctgggtatcagatatgacccaagcattgatgtctacagcctggacttctatgtggtgctg
gaaaagccaggtttcatcattgcagatcctcagtttgtggtctgccagctaaaggtgaag
atatattcctccaattcaggacccacacgacgggaagacaagttcatgtactttgagttc
cctcagccgttacctgtgtgtggtgatatcaaagtagagttcttccacaaacagaacaag
atgctaaaaaaggacaaaatgtttcacttttgggtaaatacattcttcataccaggacca
gaggaaacctcagaaaaagtagaaaatggaagtctatgtgatcaagaaatcgatagcatt
tgcagtatagagcgtgcagataatgacaaggaatatctagtacttactttaacaaaaaat
gatcttgacaaagcaaataaagacaaagccaaccgatacttttctccaaattttaag