GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:28:23

Sequence gi568815588r:32088323_32288817 : 200495 bp : 43.43% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11274  11326   53  2  2   86   89    26 0.019   3.13
 1.02 Intr +  14643  14742  100  0  1   78   73   127 0.005  10.31
 1.03 Intr +  21570  21830  261  2  0   61   43   385 0.384  28.98
 1.04 Intr +  21882  22100  219  2  0   45   67   214 0.402  13.50
 1.05 Term +  22338  22376   39  2  0   66   28    42 0.493  -6.81
 1.06 PlyA +  22489  22494    6                              -0.45

 2.05 PlyA -  22880  22875    6                               1.05
 2.04 Term -  23498  23339  160  1  1   -4   41   179 0.483   1.41
 2.03 Intr -  27137  26795  343  0  1  -85   90   726 0.674  49.99
 2.02 Intr -  27458  27172  287  1  2   -9   32   860 0.586  67.69
 2.01 Init -  27718  27672   47  1  2   74   79    56 0.561   2.41
 2.00 Prom -  34282  34243   40                              -3.16

 3.00 Prom +  41061  41100   40                              -2.76
 3.01 Init +  58081  58162   82  0  1   61   94    49 0.196   3.93
 3.02 Intr +  73326  73454  129  1  0  109   21    40 0.148   0.07
 3.03 Intr +  73745  73809   65  0  2   94   94    -7 0.326  -1.06
 3.04 Intr +  74867  74968  102  1  0   75   77    34 0.342   1.37
 3.05 Intr +  77031  77088   58  2  1  113   91    14 0.435   2.66
 3.06 Intr +  79387  79471   85  2  1   62   71    55 0.163   0.08
 3.07 Term +  89356  89422   67  1  1  117   45    54 0.283   1.41
 3.08 PlyA +  90220  90225    6                               1.05

 4.03 PlyA -  90602  90597    6                               1.05
 4.02 Term - 100426  99998  429  1  0   77   38   468 0.998  36.00
 4.01 Init - 104229 104176   54  0  0   79  115    35 0.655   6.58
 4.00 Prom - 105067 105028   40                              -5.76

 5.03 PlyA - 105209 105204    6                               1.05
 5.02 Term - 111492 111403   90  0  0   93   45    56 0.330  -0.48
 5.01 Init - 121267 120542  726  1  0   32   13   268 0.120   8.51
 5.00 Prom - 141037 140998   40                              -4.66

 6.08 PlyA - 142195 142190    6                               1.05
 6.07 Term - 143893 143701  193  0  1   22   34   177 0.703   2.59
 6.06 Intr - 183595 183232  364  2  1  100  113    92 0.874   7.14
 6.05 Intr - 183845 183704  142  2  1   85  110    94 0.934  11.23
 6.04 Intr - 184959 184841  119  1  2   60   94   143 0.569  12.28
 6.03 Intr - 198413 198372   42  0  0   70  116    26 0.201   1.81
 6.02 Intr - 198628 198604   25  1  1  109   87   -19 0.213  -2.30
 6.01 Intr - 198952 198776  177  1  0   78   87   164 0.988  15.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  14730  14524  207  0  0   55   63   171 0.855  10.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:32088323_32288817|GENSCAN_predicted_peptide_1|223_aa
MVEGKGEAGPSSQGGRTECNKMYIKATLGVIDQTEILSHLVNADDIHESSRSHFTNNDSY
VFSASRMSTEANCASLLAVFHSDSLLDPAIFAEVSKLDGAVQDLRVARGNGSQIQYQQVC
ARYRVLCVPPNPLLYAWQGGHPLYLTSFFGGHILGDSLGMGHLLLRAKAVWLLYCLKTEH
PEDDVQSKQWLTHFLDQFANVKNSLALKKIEMGRFSTDIDLHI

>gi568815588r:32088323_32288817|GENSCAN_predicted_CDS_1|672_bp
atggtggaaggcaaaggagaagcaggaccttcttcacagggtggcagaacagagtgtaat
aagatgtacatcaaagcaactcttggtgtcatagatcagacagaaattctctctcatctt
gtcaatgctgatgacatccatgaatccagcaggagccatttcaccaacaacgactcctac
gtcttctcggcttccaggatgagcaccgaggccaattgcgcctcgcttttggcggtcttc
cacagcgactcactgctggacccggccatctttgcagaagtcagcaaactggacggtgcg
gtgcaggatctgcgtgtggcgcggggaaacggaagccagatccagtaccagcaggtgtgc
gcgaggtacagggtgctctgcgtgccccccaacccgctcctgtacgcctggcagggcggg
catcccctctacctgaccagcttcttcggaggacacatcttgggggacagcctaggaatg
ggccacttactcctgcgggccaaagccgtgtggctgctgtactgcctgaagaccgagcat
cctgaggacgacgtgcagagcaagcagtggctcacccatttcctcgaccaatttgccaac
gttaagaacagcctggccttgaagaaaattgagatgggccggttcagtacagacattgat
cttcatatttaa

>gi568815588r:32088323_32288817|GENSCAN_predicted_peptide_2|278_aa
MWLLFEATADLLTSAQRRKKQQKKQKRKRKKRKRRKKRRKKKEEEEEKKEKKEKEKKEKE
KEEKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEEEEEEEEEEEESIQYRKKKKKKK
KEKEKEKEKEKEKEKKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESIQC
GLHLRLWEKSRPTSGVILTMVDNDFPSNSSRTAFSKDTVRLQEAMRQLGSEPSRVRMDED
ALTTLKILIIGESGAGKSSLLLSFTDNTFDPELAATIA

>gi568815588r:32088323_32288817|GENSCAN_predicted_CDS_2|837_bp
atgtggttgctatttgaagcaactgcagacctgctcacctcggcacagagaaggaagaag
cagcagaagaagcaaaagaggaagaggaagaagaggaagaggaggaagaagaggaggaag
aagaaggaggaggaggaggagaagaaggagaagaaggagaaggagaagaaggagaaggag
aaggaggagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaaagtatccaataccgaaagaagaagaagaagaagaag
aaggagaaggagaaggagaaggagaaggagaaggagaaggagaagaaggaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaagtatccaatgt
gggttgcatctgagactctgggagaaatctagaccgaccagtggggtcattctaacaatg
gtggacaatgattttccttcaaacagtagtaggacagcctttagcaaagacactgtgagg
ctgcaagaagcaatgagacagctgggctcagagcccagcagggtgaggatggatgaggat
gcgctgaccaccctgaagatcctcatcattggcgagagtggggcgggcaagtccagcctg
ctcttgagtttcacagataatacttttgatccagaacttgcagcaacaatagcatga

>gi568815588r:32088323_32288817|GENSCAN_predicted_peptide_3|195_aa
MLDDGIPSLLSVRYPVENSQIKELRLPDSPTCMGSLRMFRRLCEGPAHAARIPSGYCSSL
LLLCCHSLPAGQSKVGNNPSFLQIVIWFCMAQGSWRGFSLKWCEQQLWMTGTTGTTHGLL
GRAEVMVPLALPFPNPSSLVVPNAQAESNDYWFRPLTFGVVYDTTGANRSKHNRVFRNTT
STEVYGSCRKTQMHG

>gi568815588r:32088323_32288817|GENSCAN_predicted_CDS_3|588_bp
atgcttgatgatggcatcccatcccttctgtctgtgagataccccgtggaaaactctcag
atcaaagaactaaggttgccagacagtccaacctgcatgggctccctccgaatgtttcgg
agactctgtgaggggcccgcacatgctgcacgcattccttctggctattgctcctctttg
ctgctcctctgttgccactccttgccagctggtcaatcaaaggtgggaaataacccttcc
tttctacagattgtcatatggttctgtatggcccaggggtcgtggcgaggcttctccctg
aaatggtgtgagcagcagctgtggatgactggaacgactggaacgactcatggccttctt
gggagggcagaagtcatggttcctctagccctccctttccccaacccttcaagcctagtg
gtgcccaatgcccaagctgagtcaaatgattactggtttaggccactaacttttggtgtg
gtttatgatacaaccggagctaacagatccaaacacaacagggtttttaggaacaccaca
agcacagaggtgtacggttcctgcaggaaaacacagatgcatggctga

>gi568815588r:32088323_32288817|GENSCAN_predicted_peptide_4|160_aa
MVVQQCECTLMPLKMAKMLFADKFPKTAENFRALSTGEKGFSYKGSCFHRIIPGFMYQGR
DFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGK
HVVFGKVKEGMNIMEAMERFGSRNGKTSKKITIADCGQLE

>gi568815588r:32088323_32288817|GENSCAN_predicted_CDS_4|483_bp
atggttgtacaacaatgtgaatgtaccttaatgccgcttaaaatggctaaaatgctgttt
gcagacaagttcccaaagacagcagaaaattttcgtgctctgagcactggagagaaagga
tttagttataagggttcctgctttcacagaattattccagggtttatgtatcagggtcgt
gacttcacacgccataatggcactggtggcaagtccatctatggggagaaatttgaagat
gagaacttcatcctaaagcatacaggtcctggcatcttgtccatggcaaatgctggaccc
aacacaaatggttcccagtttttcatctgcactgccaagactgagtggttggatggcaag
catgtggtctttggcaaagtgaaagaaggcatgaatattatggaggccatggagcgcttt
gggtccaggaatggcaagaccagcaagaagatcaccattgctgactgtggacaactcgaa
taa

>gi568815588r:32088323_32288817|GENSCAN_predicted_peptide_5|271_aa
MLKGTVTKTAWYWYQNRDIDQWNRIEPSEIIPRIYNHLIFDKPDKNKKRGKDSLFNKWCW
ENWLAICRKLKLDPFFTPYTKINSRWIKDLHVRPKTIKTLEENLGNTIQDIGMGKDFMAK
TSKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFAIYPSDKGLISRIYKEL
KQIYKKKTNNPIKKWVKDMNRHFSKEDIYAANGHMKKCSSSLAIREMQIKTTMTYHLTPV
RMLMINNKCPMQKVQGPQLKEIFHQNAINAL

>gi568815588r:32088323_32288817|GENSCAN_predicted_CDS_5|816_bp
atgctaaaaggtacagtaaccaaaacagcatggtactggtaccaaaacagagatatagac
caatggaacagaatagagccctcggaaataataccacgcatctacaaccatctgatcttt
gacaaacctgacaaaaacaagaaacgaggaaaggattccctatttaataaatggtgctgg
gaaaactggctagccatatgtagaaagctgaaactggatcccttctttacaccttataca
aaaattaattcaagatggattaaagacttacatgttagacctaaaaccataaaaacccta
gaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatggctaaa
acatcaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaag
agcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggag
aaaatttttgcaatctacccatctgacaaagggctaatatccagaatctacaaagaactt
aaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtgaaggatatgaac
agacacttctcaaaagaagacatttatgcagccaacggacacatgaaaaaatgctcatca
tcactggccatcagagaaatgcaaatcaaaaccacaatgacataccatctcacaccagtt
agaatgctaatgattaataataagtgccccatgcaaaaagtacaaggtcctcagctaaag
gaaatctttcaccaaaatgccatcaatgcactttga

>gi568815588r:32088323_32288817|GENSCAN_predicted_peptide_6|353_aa
QDKADLIRPKRKYEKKPKVLPSSAAATPQQTSPAALPVFNAKDLNQYDFPSSDEEPLSQE
SRLSVLCCVLDLHEDGLGAVEAFTAEQYQQHQQQLALMQKQQLAQIQQQQANSNSSTNTS
QGFVSKTLDSASAQFAASALVTSEQLMGFKMKDDVVLGIGVNGVLPASGVYKGLHLSSTT
PTALVHTSPSTAGSALLQPSNITQTSSSHSALSHQVTAANSATTQVLIGNNIRLTVPSSV
ATVNSIAPINARHIPRTLSAVPSSALKLAAAANCQVSKVPSSSSVDSVPRKFVTNQLLQR
KQMMIDVLHTWKATVPKTEIWEKLAKMYKTTLDVIFVFGLELILAVARQLALA

>gi568815588r:32088323_32288817|GENSCAN_predicted_CDS_6|1062_bp
caagataaagccgatcttatccgaccgaaacggaaatatgaaaagaagcccaaagtctta
ccatcgtctgccgctgctactccccaacagacgagtcctgctgcactgccagtcttcaat
gctaaagatctgaatcagtatgactttcccagctcagacgaagaacctctctcccaggaa
agcaggctgtcagtactatgctgtgtattggatttgcacgaagacgggttgggcgcggtg
gaagcatttacagccgaacaataccagcaacatcaacagcaactggcactcatgcagaaa
cagcagcttgcacaaattcagcaacagcaagcaaatagtaattcctccaccaacacatca
cagggttttgtttctaagactttggattctgctagtgcacagtttgctgcttctgctttg
gtgacatcagaacaactgatgggattcaagatgaaggatgatgtggtgcttggaatcggg
gtgaatggcgtccttccagcctcaggagtatacaagggcttacacctcagtagtactaca
ccaacagcacttgtacatacaagtccatcaacggcaggttcagctttgttacagccttca
aatattacacagacttcaagttcccacagtgcactgagtcatcaagtaactgctgccaat
tctgcaacaactcaggttctgattgggaacaacattcgattaactgtaccttcatcagtt
gccactgtaaactctattgccccaataaatgcacgacatatacctaggactttaagtgct
gttccatcatctgccttaaagctggccgctgcagcaaactgtcaagtttccaaggtccca
tcttcatcctctgtagattcagttccaagaaagttcgtgaccaaccaactacttcagagg
aaacaaatgatgattgatgtccttcatacctggaaggcaacagtacctaagacagaaatt
tgggaaaaactagccaaaatgtacaagaccacactggatgtcatctttgtgtttggatta
gaactcattttggcggtggcaagacaactggctttggcatga