GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:57:32

Sequence gi568815588r:14421193_14630459 : 209267 bp : 42.79% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4419   4487   69  1  0   41  107    74 0.213   2.84
 1.02 Term +   8267   8388  122  0  2  103   48    55 0.649   0.66
 1.03 PlyA +   9692   9697    6                               1.05

 2.00 Prom +  24029  24068   40                              -4.75
 2.01 Init +  26934  27315  382  2  1   57   47   336 0.387  23.48
 2.02 Intr +  30458  30567  110  0  2   30   93    18 0.522  -4.42
 2.03 Intr +  32068  32166   99  0  0   78   55    73 0.655   2.39
 2.04 Intr +  33488  33691  204  1  0   85   66   133 0.858   9.27
 2.05 Term +  38872  39036  165  0  0  109   42    81 0.577   2.53
 2.06 PlyA +  39482  39487    6                               1.05

 3.25 PlyA -  44710  44705    6                               1.05
 3.24 Term -  46110  46043   68  1  2  127   39    67 0.312   2.82
 3.23 Intr -  52904  52676  229  2  1   83   76   109 0.420   5.72
 3.22 Intr -  55419  55282  138  0  0   65    3   131 0.668   2.04
 3.21 Intr -  57181  57100   82  0  1   72   37    98 0.437   1.82
 3.20 Intr -  60393  60238  156  2  0    3   77   131 0.170   1.70
 3.19 Intr -  60675  60609   67  1  1   74  115    15 0.120  -0.16
 3.18 Intr -  64914  64794  121  0  1   61   68    98 0.572   4.25
 3.17 Intr -  67823  67686  138  2  0  125   44    92 0.878   8.24
 3.16 Intr -  75284  75146  139  1  1   28   42   110 0.036  -0.05
 3.15 Intr -  99469  99399   71  1  2   89   76    80 0.056   3.96
 3.14 Intr - 100114 100055   60  1  0   49   62    87 0.362   0.21
 3.13 Intr - 100827 100677  151  2  1   89  110   181 0.789  19.64
 3.12 Intr - 109323 109140  184  1  1   97   93   161 0.988  15.42
 3.11 Intr - 111689 111578  112  2  1   89   28   111 0.974   4.23
 3.10 Intr - 112924 112662  263  2  2   75   36   120 0.043   1.78
 3.09 Intr - 124266 124141  126  1  0   68   53   140 0.153   8.23
 3.08 Intr - 126407 126281  127  2  1   21   61   178 0.607   7.73
 3.07 Intr - 127280 127079  202  1  1   53   73    59 0.186  -0.73
 3.06 Intr - 130800 130640  161  0  2   25   82   122 0.108   3.16
 3.05 Intr - 132195 132130   66  0  0   92   83    34 0.119   1.48
 3.04 Intr - 135445 135363   83  2  2   86   48    53 0.114  -0.46
 3.03 Intr - 138271 138126  146  0  2   63   94    76 0.000   4.71
 3.02 Intr - 145364 145100  265  0  1   71   66   154 0.000   7.15
 3.01 Init - 163256 163181   76  2  1   84   15   126 0.074   6.20
 3.00 Prom - 166150 166111   40                              -7.05

 4.03 PlyA - 166174 166169    6                               1.05
 4.02 Term - 177112 176979  134  2  2   23   42   159 0.545   2.07
 4.01 Init - 179197 179080  118  1  1   47   92   113 0.591   8.03
 4.00 Prom - 185463 185424   40                              -4.05

 5.03 PlyA - 186084 186079    6                               1.05
 5.02 Term - 188822 188731   92  0  2   94   47   109 0.263   4.30
 5.01 Init - 201963 201858  106  0  1   64   86    48 0.027   2.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 112420 112337   84  1  0   55  103    44 0.917   3.55
S.002 Term - 124266 124100  167  1  2   68   43   151 0.828   5.70
S.003 Init + 148428 148497   70  2  1   81   78    32 0.832   2.76
S.004 Term + 149847 150055  209  1  2   69   49   189 0.887   9.62
S.005 Term - 202819 202701  119  2  2   83   49   118 0.830   5.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:14421193_14630459|GENSCAN_predicted_peptide_1|63_aa
XKPAQVRVILWDTILHADTDIQPVTKNITHNKNIHSFQSGHFAFTTDVLLLVNNCAVAKA
AWS

>gi568815588r:14421193_14630459|GENSCAN_predicted_CDS_1|192_bp
ncgaagcctgctcaagtaagggtgattctctgggacaccatcctccacgcagacacggac
attcagcctgtgactaagaatataactcacaacaagaacatccattcttttcagtctgga
cactttgccttcaccacggatgtgctgctcctggttaataattgtgctgtagctaaggct
gcttggtcctga

>gi568815588r:14421193_14630459|GENSCAN_predicted_peptide_2|319_aa
MHTEGAMLADSITHYGIRARGPLLPVCPVTAERRDIRTRCPTGLSHTVVLKQVSSHLSPP
WSAAAGDTFREVQVHHSSRAWLGKPLPTAVLNRSPVPVLGPWCHVAGAPAGPSLTPTLPA
LPREDTAGVSAFASSPPLSVLPPPCKKCLLPSAVILTPPQPCGTITDYLFCFGGAAGREV
RTSFFRELGSSDCSGKWKAKSKNRHISILIARSNANAATDMVRRICPLQSLPQLHFQHLA
QAAISLTWAATEAVQEPPLPCRPELVVTWYSFLNKYENREGHSQKFSPPLKADLAKIDAS
RYCHREWHGTGFDFKAENK

>gi568815588r:14421193_14630459|GENSCAN_predicted_CDS_2|960_bp
atgcacactgaaggagcaatgttggctgactccatcacccattatggcatccgagcccga
ggccctcttctgccagtctgtcctgttactgctgaaagaagggacatcagaactcgatgc
cctaccggactctctcacactgtggtattgaagcaggtgtcctctcatttgtccccaccg
tggtctgctgctgcaggcgacaccttcagggaggtccaagtccaccatagcagcagggcc
tggctgggcaagcccctgcccacagctgtcctcaacaggtccccagtccctgtgcttggc
ccatggtgccatgttgcaggtgctcctgcagggccttctctgacacccaccctccctgct
cttccccgtgaggacactgcaggggtttctgcttttgcctcctctcctcctctttctgtc
ttgccaccaccatgtaagaagtgccttctgccttcggccgtgattctgacgcctccccag
ccatgtggaactataacagattacctcttctgtttcggaggtgcagctggaagagaagta
aggacgtccttctttcgtgagctgggatccagtgactgttcagggaaatggaaagcgaag
agtaagaaccggcacatcagtatcctcatagcaagaagtaatgctaatgccgccaccgac
atggtgagacggatttgcccccttcaaagccttccgcagctccacttccaacacctggcc
caagccgccatctctctcacctgggctgctacagaggctgttcaagaacctcccctcccc
tgcaggccagagctagttgttacctggtattctttccttaataaatatgagaacagagaa
ggacacagccagaaattttctccaccacttaaagcagatctggcaaagatagatgcatca
agatactgccatcgagaatggcatggcactgggtttgattttaaggcagaaaataaataa

>gi568815588r:14421193_14630459|GENSCAN_predicted_peptide_3|1076_aa
MERKTLSAEGHGVRKHNSHRQLDLGGSHQAAVQVGARAVVSSEARLRKSVSRLPQVMGRI
HFPAVVGRGSPAVPCRTGPYFLSAGKDGRLQHDGFTGVTSHHLCYLLLLEAGDREPGDLN
LPGMVSIRMEALWQVCQDHLSPCPWYSDLGAGKAGLMKAGCAGCLVKPGVACGLDGPGRS
QVRGSSTEHTENAVETNFVDRETVGTALQSILKAGLREAKCVAKVDRKHSPTAVGLKYEK
LVSQATKKVLKPFWGRTGENLIKPERGALRFQLLAARCCYLRPTHPHRPVYKGTSTSPGA
GRRCSRKSIWSLRPPCASPWTPRVSVFPVVDPREMLTGAFQSVDTQKYSKYAKIGKALKS
ETLLVFRIRDAQPVVTFKDVNQVFIKRYINGDVSDRAQDTPSPQINSFVTEALNHYEAPV
VKKDKPVKKKEDVCPCVDSIYIYFTTLSHGKTSSWAEILNALHALLCSHKCLKSQPQPPP
PAPARSARVSLIGDRLGCPSPHWSYLLPKCNNEVKVRGSCLFGFGIVEIIYGEGQKYGAF
YGNSPPEDIDHKDSYLITRSIMAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLM
NQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQ
KLQEEQENAPEFVKLTPEKERECRAQPLPLLALNLEIGSLKSNSEVTPIGGKSLRVMEAD
LAVKPLILAGALSLTGCSLLTFSMLPSGTECTASVNWPQPVYGQQPLIRTKLLKSVSSPI
KAVVMAGGMGELKAYVHTKTNAQMFLATFFIIDKICKQPGCSSIDEWINRADMILLIPAI
ALCHSVIFQCDECIWAMPRVSHLASLAGDQHAGTTGSGIPPGKRHKAPPTPPPPEKKLVR
KEGRRDRAPPSHEAPFIIHTQLASKRDERLGGRHNSEVFLDVRVKDQEHLFITSGLKLRV
EKGSKSDSGILVNLGIGNNGEDLRISQLTRLHGPSLHLQGQVLTFRGSWFWKRDHNKKHA
PRPLKRHLPQGGGQRNGEVRAEALPQDPANVCCQGPKEESTCSTYSPYVPGSLLLP

>gi568815588r:14421193_14630459|GENSCAN_predicted_CDS_3|3231_bp
atggagcgaaagactctgagtgccgagggccatggggtgcgaaagcataattctcatcgg
cagctggacctcggaggctctcaccaggctgctgtccaggtgggcgccagggctgtggtc
tcatcagaggctcgactgaggaagagtgtttccaggctccctcaggtcatgggcagaatt
catttccctgcagttgtgggacgtgggtcgcctgcagttccatgccgcacaggtccttac
ttcctttcagctggcaaggatggaagattgcagcatgatggcttcacaggagtgacatct
catcacctttgctatcttctgttgttagaagcaggtgacagagaaccgggggatttaaat
ctccctggtatggtttccattagaatggaagctctttggcaggtctgccaggaccattta
tcaccttgtccctggtactcagacctcggtgctggcaaagctgggctcatgaaggctggc
tgcgcaggatgccttgtgaagccaggtgtggcttgtggcctagatggaccagggagatct
caagtgaggggcagtagcacggagcacacagagaatgcagttgaaactaattttgtggat
agagaaactgttggaactgctttacaaagtattttaaaggcaggtctccgagaggctaaa
tgtgtggcaaaagtagacaggaagcacagtccaaccgctgtagggttgaaatatgaaaag
ctagtgtcacaggccaccaagaaggttctgaagcctttttgggggagaactggggagaat
ttgataaagccagaaagaggagccctgcgcttccagctacttgcagccaggtgctgttac
ctacgccccacgcaccctcacagacctgtgtacaagggcacaagtacctcccctggagct
ggcaggaggtgcagtcggaagagcatctggtccctgaggcctccctgtgcctccccctgg
acccccagggtgtccgtgttcccagttgttgaccctcgggaaatgctcaccggagcattt
cagagtgtagatactcagaaatattccaaatatgctaaaattggaaaagctttgaaatct
gaaacacttctggtgtttcggataagggatgctcaacctgtagtgaccttcaaagatgtc
aaccaggtattcatcaagagatatattaatggggatgttagtgatagagcccaggacacc
cccagcccccagatcaatagctttgtaacagaagcgctaaaccactatgaagctccagtt
gtgaagaaggacaaaccagtgaaaaagaaggaagatgtttgcccctgtgttgacagcata
tacatatacttcaccacactgtcccacggaaaaacatcctcctgggctgaaatcctaaat
gcactacacgcacttctgtgcagccacaagtgtctgaaaagtcaaccgcagcccccccct
cctgcaccggctcgcagtgcccgtgtctctctaataggagacaggcttgggtgcccctca
ccccactggtcctatctcctccccaaatgtaataacgaggtcaaggtcagaggcagttgt
ctgtttgggtttggcatcgtggagattatctatggtgaagggcagaaatacggagccttt
tatggaaacagcccacctgaggatattgaccataaggactcatatctcattacaagaagc
atcatggccgagccagactacatagaagatgacaatcctgaactcattaggcctcagaaa
ctgatcaatcctgtaaaaacctcccggaaccatcaagatcttcacagagaacttcttatg
aatcaaaaaaggggtcttgctcctcagaacaaaccagaattgcagaaggtgatggaaaaa
agaaaacgagaccaagtaataaagcagaaggaagaagaagcacagaagaagaaatctgac
ttggaaatagagctattaaaacggcagcagaagttggagcagcttgaacttgagaagcag
aaattgcaagaagagcaagaaaatgcccccgagtttgtgaagttaacaccagagaaggaa
cgtgaatgtcgagcacagccactacccttgttggcacttaatttagaaataggatcttta
aaaagcaacagtgaagtgactcctattgggggcaaatctctccgggtaatggaagctgac
ctagcagtcaaacccttgattctggctggggctctgtccctcactggctgttccctattg
accttctcaatgcttccctctggcactgagtgcacagcctctgtaaactggccacaacca
gtctacggtcagcagcctctgatcaggacaaagttactgaaatcagtctcttctccaatc
aaagctgtagtgatggctggtgggatgggggaattgaaagcttatgtccacacaaaaacc
aatgcacagatgtttctggcaactttcttcataattgacaaaatttgcaagcaaccagga
tgttcttccatagatgaatggataaaccgtgctgacatgattctattaataccagcaatc
gctctttgccattctgttattttccagtgtgatgaatgcatttgggcaatgccaagggtt
agccatcttgctagccttgcgggtgatcaacatgctggtactactggttctggaattcct
ccagggaagaggcataaggcacccccaacacctccacccccagaaaaaaagcttgtgagg
aaggaaggaaggagggacagggctcctcccagccatgaagcacctttcattattcacacg
caactagccagtaaaagagacgagagactcggtgggagacacaactcagaggtctttctc
gatgttcgagtcaaggaccaggaacacctgttcatcactagtggcttgaaacttcgggtg
gagaaaggctcaaaatctgacagtggcattcttgtcaatttagggataggcaacaatggt
gaggacctgaggatttctcagctcacacggctccacgggccatctctccacctccaggga
caagttctcactttcaggggttcctggttttggaagagggatcacaataagaaacatgca
ccaagacccttaaagcgacatctaccccaggggggtgggcagaggaacggggaagttaga
gcagaggcactcccgcaggaccctgcaaatgtttgttgccagggacccaaggaggagtcc
acgtgctccacttacagcccctatgttccaggctcgctccttctcccctag

>gi568815588r:14421193_14630459|GENSCAN_predicted_peptide_4|83_aa
MRWTVQFCLEFGCGVRTLCRLGLKVDRETVWFCPSVLAEAGSTKLLEENIGEEVQDTGLG
SNYAAATLKAQSTNPKLNQIASN

>gi568815588r:14421193_14630459|GENSCAN_predicted_CDS_4|252_bp
atgaggtggactgttcagttctgtctggaatttggctgtggggttcggacactttgtcgc
ttgggattgaaggtggatcgggaaaccgtatggttctgtcccagtgtccttgctgaagct
ggttccacaaaactcctagaagaaaacataggggaagaggttcaggacactggtcttggc
agtaattacgcggctgccacgctaaaagcacagtcaacaaacccaaaactaaaccagatt
gcatcgaactaa

>gi568815588r:14421193_14630459|GENSCAN_predicted_peptide_5|65_aa
MNTKRKRVVIIKIKSIALTRMNMSSLKQNAVKLGVVFRSSGVNEDLVTTERTMWEFGYYS
IRIPS

>gi568815588r:14421193_14630459|GENSCAN_predicted_CDS_5|198_bp
atgaacaccaaaagaaagagggttgtgataatcaaaatcaagtcaattgctttgacaaga
atgaacatgagcagcttaaaacaaaatgctgtcaaattaggtgtggtattcaggtcatca
ggggtcaatgaagacttggtaaccactgaacggaccatgtgggaattcggttattactca
ataagaattccttcttag