GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:16:54

Sequence gi568815588r:119068483_119278790 : 210308 bp : 46.80% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   2603   2404  200  0  2   49   91    85 0.395   3.97
 1.04 Intr -   4571   4408  164  1  2   79  116   -20 0.378  -0.48
 1.03 Intr -   5095   4959  137  1  2   18   87    71 0.391  -0.63
 1.02 Intr -   5455   5265  191  2  2   88   87    60 0.654   5.20
 1.01 Init -  12194  12146   49  2  1  104  113    37 0.905   8.92
 1.00 Prom -  12825  12786   40                              -1.36

 2.00 Prom +  15455  15494   40                              -2.96
 2.01 Init +  35568  35723  156  2  0   65   29   176 0.877   7.31
 2.02 Term +  36282  36485  204  2  0   87   42   168 0.930   9.47
 2.03 PlyA +  36560  36565    6                              -0.45

 3.00 Prom +  37138  37177   40                              -6.06
 3.01 Init +  39109  39157   49  0  1   86   89    27 0.910   1.71
 3.02 Intr +  39486  39682  197  1  2   95   86    69 0.840   6.53
 3.03 Intr +  43367  43446   80  1  2   70   48    26 0.290  -4.85
 3.04 Intr +  49037  49185  149  2  2   93  116   135 0.901  16.68
 3.05 Intr +  51859  51970  112  2  1   47   69    43 0.730  -2.26
 3.06 Intr +  54987  55087  101  0  2   78   74   165 0.991  13.85
 3.07 Intr +  61033  61140  108  2  0   70   76    79 0.715   5.16
 3.08 Intr +  64033  64127   95  2  2   49   93    67 0.656   2.98
 3.09 Term +  67989  68165  177  2  0   58   42   112 0.825   1.29
 3.10 PlyA +  69273  69278    6                               1.05

 4.03 PlyA -  71724  71719    6                               1.05
 4.02 Term -  72703  72619   85  0  1   91   50    67 0.837   0.33
 4.01 Init -  74733  74678   56  0  2   77  111    41 0.903   4.24
 4.00 Prom -  76677  76638   40                              -2.26

 5.16 PlyA -  77159  77154    6                               1.05
 5.15 Term -  77871  77776   96  0  0  112   35    40 0.452  -0.93
 5.14 Intr -  78873  78676  198  0  0   46   30   118 0.235   1.35
 5.13 Intr -  86695  86580  116  2  2   74  116    99 0.999  11.47
 5.12 Intr -  88274  88196   79  2  1  149   97     1 0.993   6.22
 5.11 Intr -  89445  89389   57  0  0   76   83    65 0.642   3.88
 5.10 Intr -  91271  91246   26  0  2  114  101    -4 0.970   1.24
 5.09 Intr -  92487  92433   55  0  1   62  109    83 0.968   6.35
 5.08 Intr -  92599  92573   27  1  0   87   89    18 0.508   0.11
 5.07 Intr -  95714  95649   66  2  0   95   81    24 0.070   1.50
 5.06 Intr -  97171  97055  117  1  0   -5   42   145 0.206   1.26
 5.05 Intr - 100860 100695  166  2  1   -4   90   170 0.976   7.96
 5.04 Intr - 104003 103900  104  2  2   21  116    77 0.984   2.77
 5.03 Intr - 105390 105255  136  2  1   92   86    65 0.985   7.27
 5.02 Intr - 106078 105969  110  1  2   57   78    71 0.386   2.08
 5.01 Init - 110308 110273   36  1  0   86  109    87 0.817   8.78
 5.00 Prom - 115516 115477   40                              -4.66

 6.00 Prom + 118469 118508   40                              -3.76
 6.01 Init + 124966 124996   31  0  1   98   38    29 0.034  -1.20
 6.02 Intr + 130771 130890  120  2  0   56   78    64 0.093   2.67
 6.03 Intr + 139341 139487  147  1  0   36  116   213 0.760  19.11
 6.04 Term + 141681 141817  137  1  2   93   39    37 0.535  -2.52
 6.05 PlyA + 142499 142504    6                               1.05

 7.05 PlyA - 142672 142667    6                               1.05
 7.04 Term - 143289 143184  106  2  1  106   48   102 0.751   5.88
 7.03 Intr - 162502 162414   89  1  2  126   68    57 0.340   6.27
 7.02 Intr - 172817 172655  163  1  1   80   82    79 0.497   6.48
 7.01 Init - 174036 173987   50  0  2  103   80    34 0.892   4.53
 7.00 Prom - 174429 174390   40                              -4.06

 8.05 PlyA - 175705 175700    6                               1.05
 8.04 Term - 178662 178448  215  1  2  -10   41   221 0.305   4.99
 8.03 Intr - 183683 183612   72  0  0   68   37    99 0.165   2.18
 8.02 Intr - 204380 204331   50  1  2  118   71    55 0.612   5.12
 8.01 Init - 208771 208704   68  1  2   93   86    24 0.398   3.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  94062  94018   45  0  0   93  105    38 0.874   5.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_1|247_aa
MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVD
LRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKMAEEKTEAAKEESQQMVLDIEDLDN
IQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQ
AFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSA
ISMELWQ

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_1|741_bp
atgccggcctattttcagaggccggaaaatgccctcaaacgcgccaacgaatttcttgag
gttggcaaaaagcagcctgctctggatgttctttatgatgttatgaaaagtaaaaaacat
agaacatggcaaaagatacacgaaccaattatgttgaaatacttggaactttgcgtggat
cttcgcaagagccacttggcaaaggaggggttataccagtataagaacatttgtcaacag
gtgaacataaaatctctggaggatgttgttagggcatatttgaaaatggcagaggaaaaa
actgaagctgctaaagaagaatctcagcagatggtcttagatatagaggatctagataat
attcaaactcctgagagtgttctcctaagtgctgtaagtggtgaagacactcaggatcgt
actgacagattacttttaactccatgggttaaattcctgtgggagtcttacaggcagtgt
ttggaccttcttagaaacaattctagagtagagcgcctgtaccatgatattgcccagcaa
gctttcaaattctgcctccaatacacgcgtaaggctgaattccgtaaactgtgtgacaat
ttgagaatgcacttatcgcagattcagcgccaccataaccaaagtacggcaatcaatctt
aataatccagagagccagtccatgcatttggaaaccagacttgttcagctggacagtgct
atcagcatggaattgtggcag

>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_2|119_aa
MGAGPTAGGAGFGCEAGPAGGSQSCAPRRRKMAAAEVADTQLMLGVGLIGEDLSPRTEGP
WETSDAHFTEEQMEAQAVIVHGHTIGRTEPGVGPSQCIPEPPTPTSGELLHHVIELVHK

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_2|360_bp
atgggggcgggccctacggcgggcggggcggggttcgggtgcgaggccggtcctgcaggc
ggcagccagagctgcgcgccgcggcggcggaagatggctgcggccgaggtggcggacact
cagctgatgcttggagtcgggctgatcggtgaggacctctcaccaaggaccgaggggccg
tgggaaacgtctgacgcccacttcacggaggagcaaatggaggcccaggccgtcattgtg
cacggacacaccataggccgtacagagccgggagtgggaccctcgcagtgtatcccagag
cccccaacccccaccagtggagagctcctgcatcatgtgatcgagcttgtgcataaataa

>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_3|355_aa
MGFLQVGQAGLEVPTSEKDTNGEVLWVWCYPSTTATLRNLLLRKCCLTDENKLLHPFVFG
QYRRTWFYITTIEVPDSSILKKVTHFSIVLTAKDFNPEKYAAFTRILCRMYLKHGSPVKM
MESYIAVLTKGICQSEENGSFLSKDFDARKAYLAGSIKDIVSQFGMETVILHTALMLKKR
IVVYHPKIEAVQEFTRTLPALVWHRQDWTILHSYVHLNADELEALQMCTGYVAGFVDLEV
SNRPDLYDVFVNLAESEITIAPLAKEAMAMGKLHKEMGQLIVQSAEDPEKSESHVIQDIA
LKTREIFTNLAPFSEVSADGEKRVLNLEALKQKRFPPATENFLYHLAAAEQMLKI

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_3|1068_bp
atggggtttctccaggttggtcaggctggtctcgaagtcccgacctcagaaaaggacaca
aatggagaagttctgtgggtgtggtgttatccttccacgacagccacattaaggaacctg
ctgctgagaaaatgctgccttacagatgaaaacaaacttctccatccctttgtctttggt
cagtacagaagaacatggttttatatcacaacaattgaagttccagattcttccattttg
aaaaaggtgactcatttttctattgtcctgaccgccaaagattttaacccagagaagtat
gctgccttcactaggatattgtgtagaatgtacctgaaacatgggagcccagttaaaatg
atggagagttatattgcagttctcacaaaggggatatgccagagtgaagaaaacggctct
ttccttagtaaggattttgatgcccgaaaggcctacctggctggctccatcaaagacatt
gtatctcagtttggaatggaaactgttatcttacacacagcactgatgctaaagaaaaga
attgtggtgtatcaccccaagatagaagcggtccaggagttcaccaggactctgcctgcc
ctggtgtggcaccgacaggactggaccatccttcactcttacgtgcacctcaacgccgat
gagctggaagccctgcagatgtgcacaggttacgtcgctggatttgtagacttggaggtg
agcaacagaccagacctctatgatgtgtttgtgaatctggcagagagtgagattaccatt
gctccccttgcaaaagaggccatggcaatgggcaaactgcacaaagaaatgggtcagcta
attgttcagtctgcagaagatccagagaaatcagagagccacgttatacaggatattgct
ctaaaaacaagagaaatctttaccaacctagcaccgttttcagaagtttcggctgatgga
gaaaagagagtccttaatttggaggcgctaaagcaaaaacgatttccaccagcaacagaa
aacttcctttatcatctagcagcagccgaacaaatgctgaaaatctga

>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_4|46_aa
MLGARWQGLHSQAKEQGSRFGLENFATGLLGTPEVSVLTRRLQIPY

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_4|141_bp
atgctgggggccaggtggcagggcctgcacagccaggccaaggagcagggcagcaggttc
ggtttagagaactttgccacaggtcttctggggaccccagaggtgtctgtgctgacaagg
cgacttcagattccatactga

>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_5|462_aa
MAAAVGRLLRASHAPYFKGTAVVNGEFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAF
SDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVL
LEGSGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQYVETHGEVCPANWTP
DSPTRKMSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTN
VFISVIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFMAPTVFLCAYMAAFNSINGNRSY
VIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGHSR
IAGTKKPEMAYEAEDLGIHQGSCGHQYEKPNLQELRPEGRRWGFRAGTGKDCSPWQLEQK
LPCWARLPVILDPVFQEKPRVIVDFETVLYCPGNGTDGAIFF

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_5|1389_bp
atggcggctgctgtaggacggttgctccgagcgtcgcatgcaccctattttaagggtaca
gccgttgtcaatggagagttcaaagacctaagccttgatgactttaaggggaaatatttg
gtgcttttcttctatcctttggatttcacctttgtgtgtcctacagaaattgttgctttt
agtgacaaagctaacgaatttcacgacgtgaactgtgaagttgtcgcagtctcagtggat
tcccactttagccatcttgcctggataaatacaccaagaaagaatggtggtttgggccac
atgaacatcgcactcttgtcagacttaactaagcagatttcccgagactacggtgtgctg
ttagaaggttctggtcttgcactaagaggtctcttcataattgaccccaatggagtcatc
aagcatttgagcgtcaacgatctcccagtgggccgaagcgtggaagaaaccctccgcttg
gtgaaggcgttccagtatgtagaaacacatggagaagtctgcccagcgaactggacaccg
gattctcctacgcgcaaaatgtccctggaacaggaggaggaaacgcaacctgggcggctc
ctaggacgcagagacgccgtccccgccttcattgagcccaacgtgcgcttctggatcacc
gagcgccaatcctttattcgacgatttcttcaatggacagaattattagatcctacaaat
gtgttcatttcagttatacaagaagcttggaagcggagtcttgcaacagtgcatcccgac
agcagcaacctgatccccaagctttttcgacctgcagcgttcctgcctttcatggcaccc
acggttttcctctgtgcctacatggcagcgttcaacagcatcaatggaaacagaagttac
gtaatccctcagtttgtccagatgaagtatggcctgactggcccttggattaaaagactc
ttacctgtgatcttcctcgtgcaagccagtggaatgaatgtctacatgtcccgaagtctt
gaatccattaaggggattgcggtcatggacaaggaaggcaatgtcctgggtcattccaga
attgctgggacaaagaagccagaaatggcctacgaggcggaggacctgggcatccatcag
ggttcctgtggccaccagtatgagaaacctaacctgcaggagctcagacccgaggggaga
cgttggggctttagggccggaacgggcaaggattgcagtccatggcagcttgaacagaag
ctcccctgctgggcgcgcctccctgtcattctcgacccagtatttcaggaaaaacccagg
gtcattgtggattttgaaactgtcttgtactgtcctggcaatgggactgatggtgccatt
ttcttttag

>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_6|144_aa
MAFGKQRKQEGRSNKAPSMKQGALTRHHICWCPDLAFSSLQNYEQSISIVSAAAARAAAA
AAAAPQALTAPPAGSVADRRLSMELENIVANTVLLKAREGFFNFAVRVWSSSHGEKIALD
DALEMERACGSRERLTREQEKLII

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_6|435_bp
atggcatttggaaaacagcgaaagcaggaaggacgtagcaacaaggcaccatccatgaag
cagggagctctcaccagacaccatatctgctggtgccctgatcttgcattttccagcctc
cagaactacgagcaatccatttctattgtttcagcggcggcagcccgagcagcggcagca
gcagcggcagcaccccaggcgctgacagccccgccggccggctccgttgctgaccgccga
ctgtcaatggagctggaaaacatcgtggccaacacggtcttgctgaaagccagggaaggc
tttttcaattttgctgtgagagtttggtcgtcatctcatggtgagaaaatagctcttgat
gatgccttggaaatggagagggcctgcggaagcagggagagactgacacgtgaacaagaa
aaattaatcatttaa

>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_7|135_aa
MMPGQLLDAGEHCQPVRKPQSMSTGTTEPTPHVAFALLHLILTEAPGIDDGTLPTSQTRK
LRPEEEGYLLQNPGSPHNTSKNHCPFGPTASAARSGVFKYRPRGANLDDQEDPAKSQSYL
KKRFLCILMFGNCDK

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_7|408_bp
atgatgccagggcagctcttggatgcaggagagcactgtcagccagtcaggaaaccgcag
tctatgagcacagggaccacagagccaacccctcacgtggcctttgctcttctccatttg
attctcacagaagccccggggatagatgacggcaccctgcccacgtcacagacgaggaag
ctgaggccggaggaggagggctatctgctacagaaccctggaagcccccacaatacttcc
aagaaccactgcccatttggccctacagcttctgctgccagatctggtgtcttcaagtac
aggccccgaggtgctaatcttgatgatcaggaagatccagccaagtcacagagttacctg
aaaaaacggttcctgtgtattctaatgtttggcaattgtgacaaatga

>gi568815588r:119068483_119278790|GENSCAN_predicted_peptide_8|134_aa
MVVCGLSWGSGRNDQGVGTRHTRSINARTSDTDNCEYLTGWSCYSHSCPYRHEHATQASS
KRDERSGVGRPRTDSHSDAELQAIAKHHLITTAESNGVQNPILGPGHGSDPGIPDSFSDL
DRTQEALSEALCAS

>gi568815588r:119068483_119278790|GENSCAN_predicted_CDS_8|405_bp
atggtggtctgtgggctctcttgggggtctggccgaaatgatcaaggtgtcggcacccga
cacacaaggtctatcaatgcgagaacaagtgacacagacaactgtgaatatctgacagga
tggtcctgctactcacacagctgcccctatcggcacgagcacgccacgcaggccagcagc
aagagggatgagaggtctggagttggacgccctaggacggacagtcactcagatgccgag
ctccaggccattgccaagcaccacctcatcacaactgcagaaagcaacggggtacaaaat
cccatcctcgggccagggcacggatctgaccccggcatcccagattccttctcagatctg
gatagaacccaagaggctctcagcgaggccctctgtgccagttaa