GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:58:41

Sequence gi568815588f:35037836_35311800 : 273965 bp : 41.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   1247   1085  163  2  1   39  115   159 0.548  12.33
 1.05 Intr -   6841   6731  111  1  0   30  116    67 0.601   3.36
 1.04 Intr -   7033   6937   97  0  1   43   92    10 0.708  -4.01
 1.03 Intr -  11930  11848   83  2  2  121   87   125 0.939  13.22
 1.02 Intr -  16704  16599  106  2  1   88   75   122 0.989  10.20
 1.01 Init -  25144  25125   20  1  2   45  121    36 0.528   2.14
 1.00 Prom -  29362  29323   40                             -10.25

 2.00 Prom +  29588  29627   40                              -6.85
 2.01 Init +  35133  35307  175  2  1   69   63   102 0.681   5.36
 2.02 Term +  52269  52915  647  1  2  103   54   203 0.588  11.70
 2.03 PlyA +  53109  53114    6                               1.05

 3.09 PlyA -  53590  53585    6                               1.05
 3.08 Term -  63225  63093  133  2  1  133   40   116 0.968   7.88
 3.07 Intr -  88827  88733   95  0  2   23   68   124 0.033   1.74
 3.06 Intr -  89827  89545  283  0  1   47   66   207 0.013  10.90
 3.05 Intr -  90570  90498   73  1  1   46   76    15 0.091  -6.35
 3.04 Intr - 103785 103621  165  1  0   72   80    88 0.590   5.41
 3.03 Intr - 106070 105991   80  1  2   82   82    53 0.608   2.38
 3.02 Intr - 106554 106395  160  1  1  109   82    54 0.631   5.02
 3.01 Init - 107602 107554   49  1  1   52   96    41 0.401   2.46
 3.00 Prom - 109110 109071   40                              -7.15

 4.00 Prom + 110998 111037   40                              -8.25
 4.01 Init + 111511 111568   58  0  1   73  115    13 0.666   4.02
 4.02 Intr + 111932 112031  100  0  1   92   38    79 0.684   1.55
 4.03 Term + 114445 114544  100  1  1   89   51   135 0.520   6.52
 4.04 PlyA + 114608 114613    6                               1.05

 5.00 Prom + 120217 120256   40                              -4.35
 5.01 Init + 124165 124226   62  0  2   76   80    69 0.164   5.67
 5.02 Intr + 129923 129968   46  2  1   27   94    85 0.047   0.49
 5.03 Intr + 138018 138164  147  2  0   57   71    97 0.901   4.41
 5.04 Intr + 141054 141151   98  2  2   49   97    96 0.942   4.49
 5.05 Intr + 141299 141441  143  2  2   55   45   122 0.813   3.68
 5.06 Intr + 150365 150553  189  0  0   75   71   142 0.839   9.84
 5.07 Intr + 155117 155320  204  0  0   93  115     3 0.016   1.75
 5.08 Intr + 163616 163651   36  0  0   75  119    19 0.247   1.02
 5.09 Intr + 169060 169216  157  2  1   81   94   219 0.733  19.95
 5.10 Intr + 173419 173559  141  1  0   99   -6   144 0.913   4.65
 5.11 Term + 173821 173968  148  1  1  102   43   183 0.961  11.59
 5.12 PlyA + 174265 174270    6                               1.05

 6.03 PlyA - 175403 175398    6                               1.05
 6.02 Term - 176821 176741   81  1  0  102   45    65 0.118   0.31
 6.01 Init - 178732 178553  180  1  0   71   52   121 0.331   6.03
 6.00 Prom - 179503 179464   40                              -0.95

 7.10 PlyA - 182080 182075    6                               1.05
 7.09 Term - 185802 185667  136  2  1   20   43   133 0.017  -1.49
 7.08 Intr - 200766 200592  175  1  1   57   90   149 0.204  10.08
 7.07 Intr - 220246 220084  163  1  1   64   31    80 0.009  -1.47
 7.06 Intr - 227821 227728   94  0  1   80    5   118 0.001   1.75
 7.05 Intr - 236823 236689  135  2  0   14   84    91 0.003   0.06
 7.04 Intr - 240455 240339  117  1  0   96   82    37 0.014   2.56
 7.03 Intr - 242875 242745  131  1  2  101   94   -12 0.034  -0.73
 7.02 Intr - 268920 268494  427  2  1   24   80   209 0.709   6.57
 7.01 Init - 269306 269206  101  2  2   35   95   124 0.715   7.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  89347  89199  149  2  2   34   42   200 0.839   7.08
S.002 Init - 231069 230961  109  0  1   79   80   111 0.937   8.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:35037836_35311800|GENSCAN_predicted_peptide_1|194_aa
MFGICIRYLNTQFIKKNKLTEADLQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQAIL
IRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYY
KQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLH
AECHNIIRQEKKNX

>gi568815588f:35037836_35311800|GENSCAN_predicted_CDS_1|582_bp
atgttcggcatttgcataaggtatctcaacacccagtttattaaaaagaataaattaaca
gaagcggaccttcagtatggctatggtggtgtagatatgaatgaaccacttatggaaata
ggagagctagcattggatatgtggaggaaattgatggttgaaccacttcaggccatcctt
atccgaatgctgctccgagaaatcaaaaatgatcgtggtggagaagacccaaaccagaaa
gtaatccatggggttattaactcctttgttcatgttgaacagtataagaaaaaattcccc
ttaaagttttatcaggaaatttttgagtctccctttctgactgaaacaggagagtattac
aaacaagaagcttcaaatttattacaagaatcaaactgctcacagtatatggaaaaggtt
ctaggtagattaaaagatgaagaaattcgatgtcgaaaatacctacatccaagttcatat
actaaggtgattcatgaatgtcaacaacgaatggtagcagaccacttacagtttttacat
gcagaatgtcataatataattcgacaagagaaaaaaaatgnn

>gi568815588f:35037836_35311800|GENSCAN_predicted_peptide_2|273_aa
MHKENGQRERVGWRPHHQPRTGRGPSVFPDEKRAQGIPGIDSMEKNEKNQRKAKYPKEAP
PPINREGKFPGACSPAPRPSAGLPSAEAGQGAGDKGRGRQPEGVKDEAPARKVGGGGGGG
GCQLAFPCSQRCHYCAPRPPPRPAAATGPGDAGGGERSPGSPRADTHLSPRGKTAKSKAA
AAPRRDRGGREGGKGEKDGPITGSVKQSSSSASGFAQHTPSGLLLPLLPNPPRHPESNGT
GRVTASAGSQASCDCERPRKLIFQVIPCWACCQ

>gi568815588f:35037836_35311800|GENSCAN_predicted_CDS_2|822_bp
atgcataaagagaatgggcaaagggagcgggtaggatggcggccgcaccaccagccacgg
actgggagaggcccttctgtgtttccagatgagaagagagctcaaggaatcccaggaata
gactccatggaaaagaatgaaaaaaatcagagaaaagccaaatatccaaaagaggccccg
ccacccattaaccgggaagggaagtttcccggcgcctgcagcccggctccccgaccctca
gcggggttaccttctgcagaagcagggcaaggggcaggggacaaggggagggggaggcag
cccgaaggagtgaaagacgaagccccggcgaggaaggtgggcggaggcggcggcggcggc
ggctgtcagctcgcgttcccctgctcacagcgctgccattactgtgcgccgaggccgcct
ccccggccggccgccgccaccggccccggagacgcggggggtggggagcgaagcccgggg
agcccgcgcgccgacactcacctgtctccgcgaggaaagacagcaaagtccaaggccgcc
gccgctccccggcgggacaggggcggtagggagggggggaaaggggagaaggacgggccg
atcacgggatccgtaaaacaatcgtcctcctctgcctccggctttgcccaacacacaccc
tccggtctccttcttccgctgctgccaaatcccccccgccacccggaaagcaatggtaca
ggccgcgttacggcaagcgcagggagccaagcttcgtgtgattgcgaaaggccacggaaa
ttaatattccaagtgattccttgctgggcttgctgtcaatga

>gi568815588f:35037836_35311800|GENSCAN_predicted_peptide_3|345_aa
MTKSARECGHMSRILKVKSIIIHSGSKARIVCLYIISQNEINHKKQPHKAKHQSGYHEAL
SLREKGRDGSNMLSGTPKASLLSSQESTAHLPTPNQGTSKSVGPELNSSSSSTNFLPEFP
ISGNGTPSSNELFKPETPETPSLSFHTASSPDLCFKGKVHPHLPGKLSRKETESRTFWGK
TGCVRFRLNCARKVGQRRWGHSNPRSLLLDSFSFSELNRSPEPHGSLREDFPTRPKFARR
QAGPGAAERTKRAWGGEPAASGAPSEGPRQKSNDLSARVTAVVRSSGSRGRFLPNAANPK
LRIEALSIPDCSKAQVVRNDWEEGRKTQVAKDMDENPWRHGKKTL

>gi568815588f:35037836_35311800|GENSCAN_predicted_CDS_3|1038_bp
atgaccaagtctgccagagaatgtggtcatatgagtcgtatattgaaggtcaagagtatc
atcatccattcaggctccaaagctagaatcgtgtgtctatatataatcagtcagaatgag
atcaaccacaaaaagcaaccccacaaagctaaacatcagtcaggataccatgaggcgttg
agccttagggagaaaggcagagatggaagcaatatgctatctggaactcccaaagcctct
ctgctgtcctctcaagagagtactgctcatcttcccacacccaatcaaggaacctcaaaa
tcagtgggtccagaactaaactcctcttcttcctccacaaactttctacccgagttccct
atctcaggaaatgggaccccatcatccaacgagttgttcaagccagaaacccctgaaact
ccctctctgtcattccacacagcatcatcaccagatctttgtttcaagggaaaggtacac
cctcatctgcccggcaaattaagtagaaaggaaactgagtcacgtacgttttgggggaaa
acgggctgcgtccgctttcgtctaaactgcgctcgtaaagtggggcagaggcgctggggg
cactcaaatccgaggtccttacttctggattccttttccttttccgagttaaaccgctcc
cctgagccgcacggctctctcagggaggattttccaactcgtcccaagttcgcgaggagg
caggcgggtcccggggcagctgagcgcacgaagcgggcgtggggcggcgagccggcggcc
tcgggggcgccgagcgaggggccgcgtcagaaatccaatgacttgtcagccagagtaacg
gctgttgtcaggtcttcagggtctcgaggtcggtttcttcctaacgccgccaaccccaag
ctaaggatagaggcactctccattcctgattgttccaaggctcaagtggtcagaaatgac
tgggaagaagggagaaaaactcaggtggcaaaggacatggacgaaaacccatggcgacat
ggaaagaaaaccctgtga

>gi568815588f:35037836_35311800|GENSCAN_predicted_peptide_4|85_aa
MGIEFNWSQVSGLGSPAGKAANTHSFPAGFLRYSVELYLPSNTFCYTERQAFRASANQEY
TMKIIRDLATVELGFGCQAPVLLMD

>gi568815588f:35037836_35311800|GENSCAN_predicted_CDS_4|258_bp
atgggtattgagtttaactggagccaggtgtctgggctgggcagtccagctggtaaagct
gccaacacccactcgttccctgcaggttttctgcggtattctgtagagctgtatctccct
agcaacaccttttgttacactgagagacaggcatttagagcttctgctaatcaagaatat
actatgaaaatcatcagagacctagcaactgttgagcttggttttggctgtcaggcccct
gttctgctgatggattga

>gi568815588f:35037836_35311800|GENSCAN_predicted_peptide_5|456_aa
MAKIRNQPRCSSVDEWIKKVWRPIEEDYSSGDVEEKVSVAGSGTRRGSPAVTLVQLPSGQ
TIHVQGVIQTPQPWVIQSSEIHTVQVAAIAETDESAESEGVIDSHKRREILSRRPSYRKI
LNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPG
SDGVQGLQALTMTNSGAPPPGATIVQYAAQSADGTQQFFVPGSQVVVQALSFISWDRPCP
LSLQGLLHTYRLPDKNTFPEEALPILHIWLRQPSVSSYCTSLGTYHVVLWLSVLLDDEET
ELAPSHMAAATGDMPTYQIRAPTAALPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKN
REAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKVEEAAKECRRRKKE
YVKCLESRVAVLEVQNKKLIEELETLKDICSPKTDY

>gi568815588f:35037836_35311800|GENSCAN_predicted_CDS_5|1371_bp
atggccaagatacggaatcagcctcggtgttcatcagtggatgaatggataaagaaagta
tggcgtcctatagaagaggattattcttcaggggatgtggaagaaaaggtttctgtggct
ggatcaggcaccagaagaggctccccagctgtaactctagtgcagttaccttcgggccaa
actatacatgtccagggagtaattcagacaccacagccatgggttattcagtcatcagaa
atacacaccgttcaggtagcagcaattgcagagacagatgaatctgcagaatcagaaggt
gtaattgattctcataaacgtagagaaatcctttcacgaagaccctcttataggaaaata
ctgaatgaactgtcctctgatgtgcctggtgttcccaagattgaagaagagagatcagag
gaagaaggaacaccacctagtattgctaccatggcagtaccaactagcatatatcagact
agcacggggcaatacattgctatagcccaaggtggaacaatccagatttctaacccagga
tctgatggtgttcagggactgcaggcattaacaatgacaaattcaggagctcctccacca
ggtgctacaattgtacagtacgcagcacaatcagctgatggcacacagcagttctttgtc
ccaggcagccaggttgttgttcaagctctttctttcatttcctgggataggccatgccct
ctctccctccagggccttcttcacacataccgattgcctgataagaatacgttccccgag
gaagccttgcccatcctccacatctggcttaggcaaccttctgtgagttcctactgtact
tccttaggcacatatcatgttgtgttgtggctctctgtcttgctagatgatgaggaaact
gaacttgccccaagtcacatggctgctgccactggtgacatgccaacttaccagatccga
gctcctactgctgctttgccacagggagtggtgatggctgcatcgcccggaagtttgcac
agtccccagcagctggcagaagaagcaacacgcaaacgagagctgaggctaatgaaaaac
agggaagctgcccgggagtgtcgcaggaagaagaaagaatatgtcaaatgtcttgaaaat
cgtgtggctgtgcttgaaaaccaaaacaagactctcattgaggaactcaaggccctcaaa
gatctttattgccataaagtagaggaagctgccaaagaatgtcgacgtcgaaagaaagaa
tatgtaaaatgtctggagagccgagttgcagtgctggaagtccagaacaagaagcttata
gaggaacttgaaaccttgaaagacatttgttctcccaaaacagattactag

>gi568815588f:35037836_35311800|GENSCAN_predicted_peptide_6|86_aa
MRIMVTASTLVGLLGELNVEAPWRRVSTLYTVAVILDCHDYVAVASVELHTHLEESKPRM
GKCSVPVPDVPSVYKPLFQKPSFIRH

>gi568815588f:35037836_35311800|GENSCAN_predicted_CDS_6|261_bp
atgaggataatggtaacagcatcaacacttgttgggctgctaggagaattaaatgtggaa
gccccttggcgcagggtgagcactctgtacacggtagctgttattcttgactgccatgac
tacgtggctgtagcatctgtggagctacatacacacctggaagaaagcaagcccaggatg
ggtaagtgctcagtcccagtgccagacgtccccagtgtctacaagccactcttccagaag
cccagttttattcgacattga

>gi568815588f:35037836_35311800|GENSCAN_predicted_peptide_7|492_aa
MNQEAEAQVASVLPEGTRLVSSSTEALQPSPAARLLCHVENEGGKKEKEKEGRGHVGEGE
RACGRRGEDSEQTGEYQKDQLFPNSFCHDACFMLNDPQTSFMCGFALVPSWSPKQGQSSV
RRSWNGPKAREGAGGNPGRPPSSGMISGNGNIVQRSKMPGANFHAVLNDKSKMVGQCHIS
EAVTKSRVIISMFTFKRFVFWAPTFNISICFELIFVYGVRPTASSVGLCWDMTYYWSVIS
IVSFELLTVPNDRMRMGGRDPGHLDIPQNKTLVLYVDDLVLIGPAEEEMASSLEALIKHM
PFAGSSFKAGRERHLQALGVGLSLLSPPALNAGCTKQKNSRAEKHNKMKNSLEGFKGRFE
QAEGGVSKVKEKTVEIIESKEQKEKRLKKNLQALSLNNLPLSVDVQQTFGKVSLGPYSVG
VTDRILKLLYFSGSHSPGNPGPDKASEGPFRPAEPKLTENGKCRFLSQLVPGDETGRASG
PQAHAFFPLSTV

>gi568815588f:35037836_35311800|GENSCAN_predicted_CDS_7|1479_bp
atgaatcaggaagcagaggcccaggttgccagcgtgttacccgagggcacaaggttagtg
agcagcagcactgaagcactgcagcccagcccagcagcaaggttgttatgtcatgtagaa
aatgaaggaggaaagaaagaaaaggagaaggaggggagagggcatgtgggagaaggggag
agggcatgtgggagaaggggtgaggacagtgaacagaccggggagtaccagaaagaccag
ctcttcccaaacagcttctgccatgatgcttgcttcatgctaaatgacccacaaacttca
ttcatgtgtgggtttgcccttgtgccttcttggtcccccaagcagggacagagttctgtt
cggagaagctggaatggaccgaaagccagggaaggagctggtggaaacccaggcaggcct
ccctcaagtggcatgatctcaggaaatggaaatattgtacaaagaagcaagatgcctggc
gccaacttccatgctgtgctgaatgacaaatccaagatggttggccagtgtcatatctca
gaagctgtcactaaatccagagtcattatttctatgtttacttttaagaggtttgtattt
tgggctcctacatttaatatttcaatctgttttgagttaatttttgtgtatggtgtgagg
cccacggcatcctcagttggactttgctgggacatgacctattactggtctgtaatcagc
attgtatcttttgagctcttgacagtccctaatgataggatgaggatggggggaagggac
ccgggccatctggacattccacagaataagacattggtcctctatgttgatgacctagtg
ctaattggacctgcggaggaagagatggcaagttcattggaggccttgataaaacatatg
ccatttgcaggctcctcattcaaagccggccgggagcggcaccttcaggcgcttggcgtg
ggcctctcgctgctgtctcccccagctctcaacgctggctgcacgaaacaaaaaaattct
agagctgaaaagcacaataaaatgaaaaattcactagagggattcaaaggcagatttgag
caggcagaaggaggagtcagtaaagttaaagaaaagacagtggaaattattgagtctaag
gaacagaaggaaaaaagattgaagaaaaatttgcaagctttgtctcttaataatctgcct
ttgtctgttgatgttcagcaaacctttgggaaggtttcccttggcccctacagtgttggc
gtcacagacaggatcctaaagctgctctacttttctggaagccacagtccagggaaccca
ggacctgacaaagcatcagaagggccctttagacctgcagaacccaaacttacagagaat
gggaaatgccgattcctttcccaactggtccctggggatgagacaggcagggcctctggt
ccccaggcccatgcattcttcccactgagcactgtgtaa