GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:57:11

Sequence gi568815587r:8124619_8330505 : 205887 bp : 46.90% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   2186   2041  146  1  2   12   92   158 0.467   8.53
 1.02 Intr -   3706   3601  106  2  1   45  115    64 0.735   4.07
 1.01 Init -   5211   5187   25  0  1   77  100    30 0.798   2.79
 1.00 Prom -   9862   9823   40                              -2.46

 2.02 PlyA -  10146  10141    6                              -0.45
 2.01 Sngl -  10966  10379  588  1  0   86   32   262 0.539  16.59
 2.00 Prom -  15359  15320   40                              -8.56

 3.00 Prom +  15895  15934   40                              -3.16
 3.01 Init +  17343  19915 2573  2  2   47   53   727 0.169  52.65
 3.02 Intr +  21241  21317   77  1  2   15  106    42 0.073  -2.14
 3.03 Intr +  33836  33959  124  0  1   29   86   109 0.038   4.44
 3.04 Intr +  37700  37840  141  2  0   30   37   128 0.200   1.37
 3.05 Intr +  40362  40489  128  0  2   61   32   103 0.208   2.32
 3.06 Intr +  44131  44382  252  2  0   75  -13   223 0.150   8.31
 3.07 Term +  44393  44568  176  0  2   66   36   221 0.326  12.62
 3.08 PlyA +  45244  45249    6                               1.05

 4.04 PlyA -  45859  45854    6                               1.05
 4.03 Term -  52994  52870  125  0  2  129   43    24 0.110   0.55
 4.02 Intr -  73394  73286  109  2  1   91   61   112 0.858   8.66
 4.01 Init -  75200  75123   78  2  0   72   75    44 0.743   2.56
 4.00 Prom -  78064  78025   40                              -0.86

 5.09 PlyA -  82075  82070    6                               1.05
 5.08 Term - 100103  99998  106  1  1   79   42   123 0.921   4.68
 5.07 Intr - 102482 102357  126  1  0  110   78   172 0.983  18.19
 5.06 Intr - 105886 105673  214  2  1  119   64   407 0.991  39.17
 5.05 Intr - 116766 116663  104  2  2   24   75   120 0.198   4.12
 5.04 Intr - 118422 118359   64  1  1   95   10    53 0.077  -4.02
 5.03 Intr - 119809 119723   87  2  0   81  101    20 0.130   2.54
 5.02 Intr - 124646 124603   44  1  2  109   94    22 0.323   2.78
 5.01 Init - 128096 128032   65  2  2   75   16   126 0.380   2.93
 5.00 Prom - 128348 128309   40                              -2.16

 6.08 PlyA - 129714 129709    6                               1.05
 6.07 Term - 137556 137396  161  1  2   79   53   106 0.603   4.30
 6.06 Intr - 137698 137629   70  1  1   69   73    73 0.941   2.65
 6.05 Intr - 138335 138140  196  1  1   70   89   128 0.921  10.52
 6.04 Intr - 138979 138948   32  1  2  112   56    -5 0.809  -4.37
 6.03 Intr - 139440 139345   96  0  0   46   40   147 0.071   5.91
 6.02 Intr - 141933 141764  170  1  2   73   72    30 0.027  -0.43
 6.01 Init - 143830 143809   22  1  1  103   90    22 0.011   3.78
 6.00 Prom - 146079 146040   40                              -1.36

 7.00 Prom + 149089 149128   40                              -5.16
 7.01 Init + 153326 153418   93  1  0   68   91    38 0.586   2.49
 7.02 Intr + 155034 155150  117  2  0  107   66    24 0.649   2.76
 7.03 Intr + 171202 171265   64  0  1   64   81    68 0.149   1.99
 7.04 Term + 173737 173912  176  2  2  105   47    85 0.480   4.02
 7.05 PlyA + 175497 175502    6                              -1.95

 8.00 Prom + 177048 177087   40                              -6.26
 8.01 Init + 177223 177267   45  0  0   90  121     2 0.201   4.38
 8.02 Term + 188257 188586  330  0  0   49   43   209 0.369   7.16
 8.03 PlyA + 188668 188673    6                               1.05

 9.03 PlyA - 190434 190429    6                               1.05
 9.02 Term - 191866 191765  102  1  0   21   37   143 0.108   0.78
 9.01 Intr - 204501 204452   50  1  2   74  117    29 0.134   2.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 141394 141487   94  0  1   63   91    40 0.808   0.78
S.002 Term + 143388 144214  827  1  2   70   35   262 0.832  12.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_1|93_aa
MEKISMEKGNRIKTVSFIEDQNALRTVWKSNMCRLKRQEFVISRAQTVTSDQEKRLLHQL
REITRVMKEGKFIDRFSPEKEAEEAPYMEDWEX

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_1|279_bp
atggagaaaatctccatggagaaaggaaacagaattaagactgtttcattcattgaagat
cagaatgccctgcgtacagtctggaaaagtaacatgtgccgcctgaagagacaagagttt
gtgataagcagagcacagactgtgacttctgaccaagagaaacggttgctacatcagctc
cgagaaatcaccagggtcatgaaagaaggaaaattcattgacagattttctccagagaaa
gaagctgaggaggccccttacatggaggactgggaagnn

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_2|195_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKGAHIAKSVLSQKNKAGGIMLPD
FKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEVISHIYNYLIFDKPDKNKKWGKDSLFNK
RLWENWLAICRKLKLDPFLTPYTKINSRWFKDLNVRPKTIKTLEENLGNTIGVDKDFMSK
TPKAMATKPKLTNGI

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_2|588_bp
atggccatactgcccaaggtaatttatagattcaacgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaggagcc
cacattgccaagtcagtcctaagccaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagaccaatggaacagaacagagccctcagaagtaatatcacacatctacaactat
ctgatctttgacaaacctgacaaaaacaagaaatggggaaaggattccctatttaataaa
aggctttgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggtttaaagacttaaatgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccataggcgtggacaaggacttcatgtctaag
acaccaaaagcaatggcaacaaaaccaaaattgacaaatgggatctaa

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_3|1156_aa
MFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHRRKQERSKIDTLTSQLKELEKQEQTH
SKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLATLIKKKREKNQID
TIKNDKGDITTYPTEIQTTIREYYKHLYAKKLENLEEMDKFLNTYTLPRLNQEEVESLNR
PVTGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLLQSIEKEGILPNSFYE
ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAKRIQQHIKKLIHHDQVGFIPGMQ
GWFNIRKSINVIQHINRAKDKNHRIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIR
SIYDKPIANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLG
KEEVKLSLFADDMTVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTES
QIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKRKNIPCSWVGRIS
IVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKAILSQKNKAGGIM
LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNDQTFDKPEKNKQWGKDSL
FNKWCWDNWLAICRKLKLDPFLTPYTKINSRWIKALNLRPKTIKTLEENLGITIQDTGMG
KDFMSRTPKAMATKDKIVKWDLMKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
RIYDELKQIYKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMR
YHLTPVRMAIIKKSGNNRNKKIVGFDLNKIDKDVERHESSCTVEWHTVILEYFNYPATYS
NSHSADNGTTDKFLTKCADIFMFHSTLTGEPNDNDLVMLMMSQLDDYNNLLPEEILTTQC
LHCCQGVLSKTRMAIIKKTDNKQVLTRNQKPSYTAGGHVKWYSCFGKWSGSSSKVSLVDI
SVKAADSQSHPSLKQRSPYSSAPGSSEGAGLLLPSGVGGGSCRFPRDRKALGSSSDRART
SPEARATLCTVEYAMTAHGADASRNRNRNRSTGCRSRPNRGRRGRRRARDKVREAHASSP
PLSGVDLLLPRGYPSL

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_3|3471_bp
atgttctttgaaaccaacgagaacaaagacacaacataccagaatctctgggacgcattc
aaagcagtgtgtagagggaaatttatagcactaaatgcccacaggagaaagcaggaaaga
tccaaaattgacaccctaacatcacaattaaaagaactagaaaagcaagagcaaacacat
tcaaaagctagcagaaggcaagaaataactaaaatcagagcagaactgaaggaaatagag
acacaaaaaacccttcaaaaaattaatgaatccaggagctggttttttgaaaggatcaac
aaaattgatagaccgctagcaacactaataaagaaaaaaagagagaagaatcaaatagac
acaataaaaaatgataaaggggatatcaccacctatcccacagaaatacaaactaccatc
agagaatactacaaacacctctacgcaaaaaaactagaaaatctagaagaaatggataaa
ttcctcaacacatacactctcccaagactaaaccaggaagaagttgaatctctgaataga
ccagtaacaggagctgaaattgtggcaataatcaatagtttaccaaccaaaaagagtcca
ggaccagatggattcacagccgaattctatcagaggtacaaggaggaactggtaccattc
cttctgaaactactccaatcaatagaaaaagagggaatcctccctaactcattttatgag
gccagcatcattctgataccaaagccgggcagagacacaaccaaaaaagagaattttaga
ccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaaacgaatc
cagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaa
ggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacagagccaaagac
aaaaaccacaggattatctcaatagatgcagaaaaagcctttgacaaaattcaacaaccc
ttcatgctaaaaactctcaataaattaggtattgatgggacgtatttcaaaataataaga
tctatctatgacaaacccatagccaatatcatactgaatgggcaaaaactggaagcattc
cctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtg
ttggaagttctggccagggcaattaggcaggagaaggaaataaagggtattcaattagga
aaagaggaagtcaaattgtctctgtttgcagacgacatgactgtatatctagaaaacccc
attgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatac
aaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagt
caaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatc
caacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaa
ataaaagaggatacaaacaaacggaagaacattccatgctcatgggtaggaagaatcagt
atcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccataaag
ctaccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaa
aaaagagcccgcatcgccaaggcaatcctaagccaaaagaacaaagctggaggcatcatg
ctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtac
caaaacagagatatagatcaatggaacagaacagagccctcagaaataacgccgcatatc
tacaacgatcagacctttgacaaacctgagaaaaacaagcaatggggaaaggattcccta
tttaataaatggtgctgggataactggctagccatatgtagaaagctgaaactggatccc
ttccttacaccttatacaaaaatcaattcaagatggattaaagccttaaaccttagacct
aaaaccataaaaaccctagaagaaaacctaggcattaccattcaggacacaggcatgggc
aaggacttcatgtccagaacaccaaaagcgatggcaacaaaagacaaaattgtcaaatgg
gatctaatgaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagg
caacctacaaaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatcc
agaatctacgatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaag
tgggtgaaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacac
atgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccacaatgaga
taccatctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagaaataaa
aaaattgttggatttgacttgaacaaaattgacaaagatgtggagaggcatgaatcctca
tgcactgtggagtggcacactgtcatcttggagtacttcaactaccctgcaacctattca
aactctcattcagctgacaatggaacaactgacaagttcttgaccaagtgtgctgacatt
tttatgttccacagcaccctaactggtgaacccaatgacaatgacttggtgatgctcatg
atgtctcaactggatgactacaacaatcttctccctgaagaaatcctcacaacgcagtgt
ctacactgctgccagggtgtcctttctaaaaccaggatggctatcatcaagaagacagat
aacaaacaagtattgacaagaaaccagaagccctcttacactgctggtggtcatgtaaaa
tggtacagctgctttggaaaatggtctggcagttcctcaaaagtcagtttggtggatatt
tcggtgaaggctgcagactctcagagtcacccctccctcaagcagcgttctccgtactct
tcggcgccgggaagctcagagggagctggcctgctcttaccttcaggtgtcggcggcggc
tcctgccgcttcccgcgggacaggaaggccttgggcagcagcagcgacagagccaggaca
agcccagaagccagagcgactctctgcactgtggagtacgccatgactgctcacggtgca
gacgccagccggaaccggaaccggaaccggagcacgggctgccgctcccgaccgaaccgc
gggcggcgcggacggcgtcgcgcgagggacaaggtgcgcgaggcgcacgcatcttcacct
ccactgtcgggagttgacctgctcctcccgcgtggttacccgtcgctgtaa

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_4|103_aa
MGGHLEEQNKGEDGEQNRHAMSHCCQERAWNLQSPTSLSLLYTPITMDCYYRYSVQCGYP
KRGAEASEESWQESSKDILTLTTHHQETSILVPLTFAHLSPFG

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_4|312_bp
atgggaggtcatttggaggagcagaacaagggagaggatggagagcagaaccgtcatgcc
atgagccactgttgtcaggaaagagcctggaatctgcagtctccaacttcactaagtctc
ctgtatactcctatcaccatggactgctattaccgttacagtgttcagtgtggctaccca
aagagaggggcagaggccagtgaggagagttggcaggaaagcagtaaggacattctcacc
ttgaccactcaccaccaagaaacttctatcctcgtacccctaacctttgcccacctgtcc
ccatttgggtag

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_5|269_aa
MRFLTGCWTEGLHALLAMVAMPFVQSSQSGSVQGEAGLYREQIDLEVNLLTTREEIISAF
SKHSPAPWLADGLWRLQEGSRTRQLPRSLQLPCEELAVGTRHHAMLAVHRETVMAVEMQD
AGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYT
KANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGD
KFFLKNNMILCQMDYEEGQLNGTFESQVQ

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_5|810_bp
atgcggttcctcacgggctgctggactgagggcctccacgccttgctggccatggtggcc
atgcctttcgtccagagctcgcagtctgggtctgtgcagggtgaggcagggctctatcgt
gaacaaattgatctggaagtgaatttattaaccactagggaagaaatcattagtgctttc
tctaaacattccccagccccgtggctagcagatgggctctggcggcttcaagaaggaagc
aggacccggcagctgcctagatctctccagctgccgtgtgaagaattggctgtgggtacc
agacatcatgccatgctggcagtgcatcgagagacggtgatggctgtggaaatgcaagat
gcaggcgtgccgatgctctccgtccagcccaaagggaagcagaagggctgtgcgggctgt
aaccgcaagatcaaggaccgctatctgctgaaggcattggacaagtactggcacgaagac
tgcctcaagtgtgcctgctgtgactgccgcctgggcgaggtgggctccaccctctacacc
aaggccaacctcatcctgtgccgacgcgactacctgaggctctttggcaccacagggaac
tgtgctgcttgcagcaagctgatcccagccttcgagatggtgatgcgggcccgggacaac
gtgtatcacctcgactgcttcgcctgccagctctgcaaccagagattttgtgtgggagac
aaattcttcctgaagaacaacatgatcttgtgtcagatggactatgaggaagggcagctc
aatggcacctttgaatcccaagttcagtaa

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_6|248_aa
MVLDQEDEAFRGHFGALLACRSESTCSSPVECVGGKLPPPAPGDLRIPLWCCGRVPGPRS
SLGGTIIEDHDPGIGAKTLTELGPRSLQVALRSRTAFVVPSNSEAQNHHPRASRRVTREA
LSAEQISGFGENRAPELGASGSAGGRRERQGARQARGRRVGPSGGHLHERDSGHLYVTVG
AHAAAGVLPLVRYRKGVSAGPEPSVPGAALLLMWPVGENAKLSDLLRVTQDVRIAAARCR
CPQAATAF

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_6|747_bp
atggtgttggaccaggaggacgaggcatttcgagggcattttggagcactcttggcttgt
cgaagtgagagtacatgctcatcacctgtggaatgtgttgggggaaaactacctccccca
gccccaggggatctgaggattccactctggtgctgtgggcgtgtccctggacctagaagc
agcttgggtgggacaatcattgaagaccacgaccctgggatcggagcaaagacgctcacc
gagctaggacctagaagcctccaggtggcgctgcggagccggacagccttcgtagttcct
tccaattctgaggcacaaaaccatcaccctcgcgccagccgccgcgtaacccgagaggcg
ctgagcgccgagcaaatcagcggcttcggggagaatcgggctccagagctcggggcaagc
gggagcgcgggaggacggcgcgagcgccagggtgcccggcaggcgaggggaaggcgggtt
ggaccctccgggggacatctgcatgagcgtgactcggggcatttgtatgtgactgttggt
gcccacgctgccgccggcgttctgccattggtgaggtaccgaaagggagtctctgctggg
cctgagccctctgtccctggggcagcgttgttattgatgtggccagttggtgaaaatgca
aagctaagtgacttgctcagggtcacacaggatgttcgcattgccgctgccaggtgccga
tgcccccaggctgctaccgccttctga

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_7|149_aa
MQVVPLELQPHVPTAHASQKQSFSMLQAGAQTRLSETKDVVQAYGHKKRSGGCFFQALPH
RTTDGSLAQQPLDAEQLVEYTTKLPNMQVLQALMSLPRYDGGCAARIRTDQGTGAKATTE
AVGVTAPGPRWPQQLVEGALVELLAEFPS

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_7|450_bp
atgcaggtggtccccttggagctacaaccgcatgtcccaacagcacatgcatctcagaaa
cagtccttctccatgctgcaggcaggggcccagaccagactctctgaaactaaagatgtg
gtccaggcctatggacacaaaaaaaggtctgggggctgctttttccaagctctacctcat
aggaccacagatgggtccctggctcaacagcctctggatgctgaacagctggttgaatac
acaactaaactacccaacatgcaagtgctgcaagctttaatgtccctccccaggtatgat
ggtggctgtgcagccaggatcagaacagatcagggcactggagccaaggccaccacggaa
gcagtgggtgttacagcgccgggaccaaggtggccccagcagctggttgaaggcgcgctt
gtggagctgctggctgagtttccttcatga

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_8|124_aa
MRLSAQVPWHLLHNKRGLQRQLEEPPCLPSIDNGDLGSSTPYPCPANCPKRPSQAYGPQT
PSTTAKTLTCSTPPRPICIHGPVGDHSVRSSLSYGLGRDPSLASLSLSQASQFSVKAAGA
SKET

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_8|375_bp
atgaggttatcagcccaggtgccctggcacctcctccacaacaagagaggacttcagagg
cagctagaggagcctccatgtctgccatccatagacaatggagacttaggaagcagcacc
ccatacccctgtccagccaactgccccaagaggccttcccaagcctatgggccccagacc
cctagcaccacagccaagaccctcacctgctccaccccaccccgccccatctgcatccac
gggccagtgggggaccattcagtgagatcctccctgtcctacggccttggccgtgacccc
agcttggcctctttgtctctcagccaggccagccagttcagcgttaaagctgctggagca
tccaaggagacataa

>gi568815587r:8124619_8330505|GENSCAN_predicted_peptide_9|50_aa
XSLQRLSCSSASDRERPWLLTPAILYTLAYGPTRTYFEDERNTAVLSPVV

>gi568815587r:8124619_8330505|GENSCAN_predicted_CDS_9|153_bp
ngttctctgcagcggctcagctgcagcagtgcctctgacagggagaggccgtggctcctc
accccagccattctgtacactctggcctatgggcccacacgaacctattttgaagacgag
aggaacacagccgtgttgtctccagtggtttag