GENSCAN 1.0	Date run:  3-Nov-116	Time: 04:37:39

Sequence gi568815587r:47617425_47867288 : 249864 bp : 43.77% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    307    302    6                               1.05
 1.04 Term -   8317   8246   72  1  0   84   47    49 0.225  -1.69
 1.03 Intr -  17310  17248   63  0  0   51   94    44 0.337   0.21
 1.02 Intr -  18147  18121   27  0  0  110   87    38 0.754   4.21
 1.01 Init -  25041  24955   87  0  0  117   80   200 0.999  20.74
 1.00 Prom -  36522  36483   40                              -4.16

 2.24 PlyA -  38106  38101    6                               1.05
 2.23 Term -  39227  38991  237  2  0   89   54    30 0.050  -4.13
 2.22 Intr -  51483  51417   67  2  1   69   99    24 0.252   0.51
 2.21 Intr -  59977  59847  131  1  2   59   92   125 0.841   9.49
 2.20 Intr -  68625  68469  157  2  1   73  121    61 0.890   7.91
 2.19 Intr -  73434  72652  783  2  0   70  100   523 0.927  42.29
 2.18 Intr -  74832  74679  154  1  1   78   65   114 0.972   7.23
 2.17 Intr -  82129  82022  108  2  0   59   72    65 0.782   2.26
 2.16 Intr -  88493  88440   54  0  0  131   53    46 0.870   4.35
 2.15 Intr -  93087  92953  135  1  0   41   73    84 0.464   2.74
 2.14 Intr -  96923  96860   64  2  1   86   85    48 0.111   2.59
 2.13 Intr - 102662 102510  153  2  0   77   29   164 0.115   9.67
 2.12 Intr - 105892 105552  341  2  2   65   70    86 0.307  -0.31
 2.11 Intr - 106748 106604  145  2  1   88   91    26 0.883   2.76
 2.10 Intr - 107204 107044  161  0  2   84  111   130 0.761  14.61
 2.09 Intr - 114137 113950  188  1  2   66   94   149 0.998  12.63
 2.08 Intr - 115246 115113  134  1  2   99  101    66 0.997   8.44
 2.07 Intr - 116705 116601  105  2  0   61  107    62 0.899   5.81
 2.06 Intr - 119316 119192  125  1  2   77   53   168 0.997  12.50
 2.05 Intr - 126739 126529  211  1  1  109   51   138 0.996  10.69
 2.04 Intr - 128970 128632  339  0  0   96   80   191 0.999  14.77
 2.03 Intr - 137240 137104  137  0  2  104   49   139 0.898  11.89
 2.02 Intr - 147938 147846   93  0  0   90   85    75 0.982   7.34
 2.01 Init - 149864 149639  226  2  1   88   57   265 0.988  20.03
 2.00 Prom - 155856 155817   40                              -4.96

 3.20 PlyA - 160859 160854    6                               1.05
 3.19 Term - 161770 161681   90  1  0  118   34    63 0.969   1.62
 3.18 Intr - 163023 162919  105  0  0   61   92    64 0.851   4.51
 3.17 Intr - 165774 165649  126  0  0   29   80   116 0.919   5.78
 3.16 Intr - 175522 175362  161  2  2   68   48   136 0.502   7.31
 3.15 Intr - 180460 180355  106  1  1  120   84   151 0.989  17.69
 3.14 Intr - 180650 180554   97  1  1  131   76    48 0.661   7.91
 3.13 Intr - 180838 180744   95  1  2   39   91   -11 0.659  -6.94
 3.12 Intr - 181039 180944   96  1  0   70  110   107 0.991  11.31
 3.11 Intr - 184506 184387  120  0  0   80   83    64 0.888   5.79
 3.10 Intr - 194800 194640  161  2  2  113   87    66 0.839   8.71
 3.09 Intr - 195005 194878  128  1  2   47   99    73 0.986   4.62
 3.08 Intr - 195623 195458  166  0  1   83   47   108 0.964   5.22
 3.07 Intr - 198225 198051  175  0  1   76   52   109 0.539   5.61
 3.06 Intr - 202034 201950   85  1  1   83   89    52 0.971   4.62
 3.05 Intr - 204397 204300   98  1  2   80   17   121 0.918   3.01
 3.04 Intr - 218385 218227  159  0  0   69   80    91 0.937   6.58
 3.03 Intr - 219577 219463  115  0  1   85  115    14 0.569   4.25
 3.02 Intr - 230598 230424  175  1  1   71  111    94 0.741   9.00
 3.01 Init - 230996 230795  202  2  1   55   60   208 0.588  11.74
 3.00 Prom - 235900 235861   40                              -3.06


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:47617425_47867288|GENSCAN_predicted_peptide_1|82_aa
MADAASQVLLGSGLTILSQPLMYVKVLIQHYQESDKGEELGPGNVQKEVSSSFDHVIKEF
FASMLTYPFVLVSNLMAVNNCG

>gi568815587r:47617425_47867288|GENSCAN_predicted_CDS_1|249_bp
atggcggacgcggccagtcaggtgctcctgggctccggtctcaccatcctgtcccagccg
ctcatgtacgtgaaagtgctcatccagcattaccaggagagtgacaagggtgaggagtta
ggacctggaaatgtacagaaagaagtctcatcttcctttgaccacgttatcaaggagttt
tttgcgagtatgttgacctatccctttgtgcttgtctccaatcttatggctgtcaacaac
tgtgggtaa

>gi568815587r:47617425_47867288|GENSCAN_predicted_peptide_2|1415_aa
MGKKSRAVPGRRPILQLSPPGPRGSTPGRDPEPEPDTEPDSTAAVPSQPAPSAATTTTTA
VTAAAASDDSPSEGKDEQEAVQEVPRVVQNPPKPVMTTRPTAVKATGGLCLLGAYADSDD
DDNDVSEKLAQSKETNGNQSTDIDSTLANFLAEVNEGIQALSNSEEEKKGVAASLLAPLL
PEGIKEEEERWRRKVICKEEPVSEVKETSTTVEEATTIVKPQEIMLDNIEDPSQEDLCSV
VQSGESEEEEEQDTLELELVLERKKAELRALEEGDGSVSGSSPRSDISQPASQDGMRRLM
SKRGKWKMFVRATSPESTSRSSSKTGRDTPENGETAIGAENSEKIDENSDKEMEVEESPE
KIKVQTTPKVEEEQDLKFQIGELANTLTSKFEFLGINRQSISNFHVLLLQTETRIADWRE
GALNGNYLKRKLQDAAEQLKQYEINATPKGWSCHWDRDHRRYFYVNEQSGESQWEFPDGE
EEEEESQAQENRDETLAKQTLKDKTGTDSNSTESSETSTESPPPPPPPPPPAEDGEIQEV
EMEDEGSEEPPAPGTEEDTPLKPSAQTTVVTSQSSVDSTISSSSSTKGIKRKATEISTAV
VQRSATIGSSPVLYSQSAIATGHQAAGIGNQATGIGHQTIPVSLPAAGMGHQARGMSLQS
NYLGLAAAPAIMSYAECSVPIGVTAPSLQPVQARGAVPTATIIEPPPPPPPPPPPPPPAP
KMPPPEKTKKGRKDKAKKSKTKMPSLVKKWQSIQRELDEEDNSSSSEEDRESTAQKRIEE
WKQQQLTIPDPYEDFMYRHLQYYGYFKAQRGSLPNSATHQHVRKNNPQCLLNGSLGEKDD
LIPDTLQKEKLLWPISLSSAVHRQIEAINREWAPPQPEYFYQPKGNEKVPEIVGEKKGTV
VYQLDSVPIEGSYFTSSRVGGKRGIVKELAVTLQGPEDNTLLFESRFESGNLQKAVRVDT
YEYELTLRTDLYTNKHTQWFYFRVQNTRKDATYRFTIVNLLKPKSLYTVGMKPLLYSQLD
ANTRNIGWRREGNEIKYYKNNTDDGQQPFYCLTWTIQFPYDQDTCFFAHFYPYTYTDLQC
YLLSVANNPIQSQFCKLQTLCRSLAGNTVYLLTITNPSQTPQEAAAKKAVVLSARVHPGE
SNGSWVMKGFLDFILSNSPDAQLLRDIFVFKVLPMLNPDGVIVGNYRCSLAGRDLNRHYK
TILKESFPCIWYTRNMIKRLLEEREVLLYCDFHGHSRKNNIFLYGCNNNNRKYWLHERVF
PLMLCKNAPDKFTQCLAELKELLRQEIHKKFHELGQDVDLEGSWSDISLSDIESSTSGSD
SSLSDGLPVHLANIADEAAKMASGKYAIKWSWASTQVSPSALEIYLLLLKLKFPHLSPSV
AISHLHFKSLAPSLLPPSSEQTAILVKTGSEARLP

>gi568815587r:47617425_47867288|GENSCAN_predicted_CDS_2|4248_bp
atggggaagaagtcccgggcggtacccggccgtaggcccatcctgcaactctctccgccg
ggtcctcggggcagcacgccgggccgggacccggagccggaacccgacactgagccggac
tcaaccgcggcggtccccagccagcccgccccgtcggcggcgacgaccaccaccaccgcg
gtgactgccgccgcggcctcggacgactcgccttcagaaggcaaggatgaacaggaagcg
gtgcaggaggttcctagagttgttcagaatcctccaaaaccagtcatgaccactagaccc
acagctgttaaagcaacaggcggtctatgcttgcttggtgcttatgctgacagtgatgac
gatgacaatgatgtttccgaaaaactagcacaatccaaagagacaaatggaaaccagtca
actgatattgatagtacattggccaacttcctagcggaagtaaatgaaggaattcaggct
ctctcaaatagtgaggaggagaagaaaggggtggcagcatcgctgcttgctcctttattg
cctgagggaataaaagaagaagaagagagatggagaagaaaagtaatttgtaaagaggag
ccagtttcagaagtaaaagaaacaagtacaacagtagaagaagcaacaacaatagtaaag
ccacaggaaattatgttggacaatatagaagacccttctcaggaggatctttgcagtgtt
gtccaatctggagaaagtgaggaggaagaggaacaagatacccttgaactggagctagtt
ttggaaaggaaaaaagcagagttgcgagccttggaggaaggagatggtagtgtgtcaggg
tctagtccacgttctgatatcagccagccagcatctcaagatggaatgcgtaggcttatg
tctaaaagaggaaaatggaagatgtttgttcgagctaccagtccagaatctaccagtagg
agttctagtaaaactggacgagatactccagaaaatggagaaactgcaattggtgctgaa
aattcagaaaaaatagatgagaattcagataaagagatggaagtagaagaatctccagag
aaaataaaagtacagacaacaccaaaagtagaagaagaacaggatttgaaatttcagatt
ggagaactggcaaataccctgacaagtaaattcgagtttctaggcattaatagacaatcc
atctccaactttcatgtgctgctcttacagactgagactcgaattgcagactggcgggaa
ggggctcttaatggaaactaccttaaacgaaaacttcaggatgcagcagaacaactaaaa
cagtatgaaataaacgccactcctaaaggctggtcctgccactgggacagggatcataga
cggtatttctatgtaaacgaacagtcgggcgagtctcagtgggagtttccagatggtgaa
gaggaagaagaagaaagccaagcacaagaaaatagagatgagactcttgccaaacagacc
ttgaaagacaaaactggcactgattcaaattcaacagaatcctctgaaacttccacagaa
tcacctccaccccctcctccaccacctcctcctgcggaagatggtgagatccaggaggta
gagatggaggatgagggaagtgaggagccccctgccccaggaacagaggaagatacccct
ttgaaaccttcagcacaaaccacagttgtaactagccagagttcagttgattccaccatc
tctagttcttcttccactaaaggaataaagaggaaagctacagaaattagcactgcagtg
gttcagaggtcagctaccattggcagttctccagttctctatagccagtcagctatagct
acaggtcaccaggcagcagggattggaaaccaggcaacaggaattggacatcagacaata
ccagttagccttccagcagcaggaatgggtcatcaggccagaggaatgagcctgcagtca
aattaccttggactagcggcagcacctgcaattatgagttatgcagaatgttctgtccca
attggagtgactgctccctcattgcagccagttcaggcccgaggtgctgtgcctaccgct
accattatagaaccaccaccaccacctcctcctcctcctcctccaccaccaccagctccc
aaaatgccaccacctgaaaagacaaaaaaaggaaggaaagacaaggcaaagaagagtaag
accaaaatgccatctttggtaaaaaagtggcagagtatccagcgtgagttagatgaagag
gacaattctagttccagtgaagaggatcgggaatcaactgcacagaagcgaattgaagag
tggaaacagcagcagctgactattcctgatccttatgaagactttatgtaccgtcacctc
caatattatggctactttaaagctcagagaggcagtttaccaaactctgctacgcatcag
catgttcggaagaataaccctcaatgcctgttgaatggctctcttggggaaaaagatgat
ttgataccagacaccctgcaaaaggagaagcttctatggcctatcagtttatcttcagct
gtgcacagacagatagaagccatcaacagagagtgggctccacctcaaccagaatatttc
tatcagcctaaaggaaatgaaaaggtaccagagattgtaggagagaaaaaaggaacagtt
gtctatcaattagattcagtgcctatagaaggttcctattttaccagttccagagtggga
ggcaaacgaggaattgtcaaggaacttgctgtcacgttgcaaggaccagaagataatact
ctactgtttgaatcaaggtttgagagtgggaatctgcaaaaagctgtcagagtagacacc
tatgagtatgaactcaccttgcgaactgacctctacactaacaaacacactcagtggttt
tattttcgtgttcagaacaccagaaaagatgctacctatcgcttcaccattgtcaacttg
ctaaaacccaagagtctttatactgtagggatgaagccactcttgtactcccaattggat
gccaacacccgcaatattggctggaggagagaaggaaatgaaatcaagtactacaagaac
aacacggatgatgggcagcagcccttctactgtctcacgtggaccattcagtttccatat
gaccaggacacttgcttctttgcacacttctacccatatacatacactgatttgcaatgc
tacctcctgtcagtggcaaacaaccctatccagtctcagttctgcaagctccaaacttta
tgcaggagcctagcaggaaataccgtttacttgctcaccatcaccaacccatcccagacc
cctcaagaggcagctgcaaagaaagctgtggtcttgagtgccagagttcaccctggagaa
agtaatggctcctgggttatgaaaggctttttggacttcatccttagcaactccccagat
gcccagctcctcagagatatttttgtcttcaaggtgcttcccatgttaaatccagatggt
gtgattgtggggaattatcggtgttccttggccggaagggatttgaacaggcattataaa
accattctgaaggagtctttcccttgtatttggtacaccaggaacatgatcaaaagactt
cttgaagaaagagaggttctgttgtattgtgatttccatggccacagtcgtaagaataat
atcttcctgtatggctgtaataacaacaatcgcaaatactggcttcatgaacgagtcttt
cctttaatgttatgcaaaaatgcaccagataagttcactcagtgtctagcagagcttaag
gagcttttacgacaggaaatccacaagaaattccatgaacttggacaagatgtagattta
gaaggaagttggagtgacatctctttgtctgacattgaatccagcaccagtggctctgac
agttctctctcagatggtcttcctgttcacctagcaaacatagcagatgaggctgccaag
atggcttcgggaaaatatgccatcaagtggtcctgggccagcacacaagtatctccttca
gccttggaaatttatcttctgcttctgaaactgaagttcccgcacctttccccctccgtg
gctatttcacacctccatttcaagtctcttgctccctctctgctgccaccttcctccgag
caaacagccatactagtcaagactggttcagaagctaggctcccgtga

>gi568815587r:47617425_47867288|GENSCAN_predicted_peptide_3|819_aa
MLHLSAAPPAPPPEVTATARPCLCSVGRRGDGGKMAAAGALERSFVELSGAERERPRHFR
EFTVCSIAPLVPVISQKTRVQADHVHFAGTANAVAGAVKYSESAGGFYYVESGKLFSVTR
NRFIHWGDQSPSDRPLSLAVHCVEHDAFIFALCQDHKLRMWSYKEQMCLMVADMLEYVPV
KKDLRLTAGTGHKLRLAYSPTMGLYLGIYMHAPKRGQETLIDFALTSTDIWALWHDAENQ
TVVKYINFEHNVAGQWNPVFMQPLPEEEIVIRDDQDPRLQGSVTEYEFSQEEFRNLQQEF
WCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKVNVDIARDVICLIKCLRLIEESVTV
DMSVIMEMSCYNLQSPEKAAEQILEDMITIDVENVMEDICSKLQEIRNPIHAIGLLIREM
DYETEVEMEKGFNPAQPLNIRMNLTQLYGSNTAGYIVCRGVHKIASTRFLICRDLLILQQ
LLMRLGDAALECFCQAASEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVIGLPE
LVIQLATSAITEAGDDWKSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQL
VVVLCERSQLQDLVEFPYVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKA
GTVMFEYGMRLGREVRTLRGLEKQGNCYLAALNCLRLIRPEYAWIVQPVSGAVKVDAAEL
LRLYLNYDLLEEAVDLVSEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALG
ENSANSHNIALSQKILDKLEDYQQKVDKATRDLLYRRTL

>gi568815587r:47617425_47867288|GENSCAN_predicted_CDS_3|2460_bp
atgcttcacctgtccgcagctccgcccgccccacccccggaagtgacggcgaccgcgcgg
ccctgcctttgttccgttgggcgtcgcggcgacggcgggaagatggcggcggcgggagcc
ctggaacggagcttcgtggagctaagcggagctgagcgcgaaaggccgaggcactttcgg
gaattcacagtctgcagcattgctcccttagtccctgtcatttctcagaagacgcgtgtg
caggctgaccacgttcattttgcagggactgcaaatgccgtggctggcgccgtaaaatac
agtgaaagcgcgggaggcttttactacgtggagagtggcaagttgttctccgtaaccaga
aacaggttcattcattggggtgaccagtcgccttcagatcgtcccctcagtcttgctgtt
cattgtgtggagcatgatgccttcatctttgctttgtgtcaggatcataaactacgaatg
tggtcttacaaggagcaaatgtgcctaatggtagctgacatgctggagtatgtccctgtg
aagaaagaccttcggcttactgctggaactggacacaaattacggcttgcttattccccc
accatgggactctacctggggatatacatgcatgcaccaaaacgaggacaggagacactg
attgactttgccttaacttccacggatatctgggccctgtggcatgatgctgagaaccaa
acagtagtgaaatacatcaactttgaacataatgttgcaggtcagtggaatccagttttt
atgcagcctctgccagaggaagagattgtcatcagagatgatcaagaccccagacttcaa
ggaagtgtaacagagtatgaattctcccaggaggagtttcgaaatttacaacaagaattc
tggtgcaagttctatgcctgttgtcttcagtatcaagaagccctctctcaccctcttgcc
ctacatttgaatccacacacaaacatggtgtgcctgctgaaaaaagtaaatgtggacatc
gctcgggatgtcatatgtcttataaaatgcctccggctgattgaagagtcagtaactgtg
gatatgtcagttataatggaaatgagttgttataacctacagtctccggaaaaggctgca
gagcagattctggaagatatgatcactattgatgtagaaaatgtgatggaggatatttgt
agtaaactgcaagagattaggaacccaatccatgcaattggactacttatacgggaaatg
gattatgaaacagaagtggaaatggaaaagggattcaatccagctcagcctttgaatatt
cgaatgaatcttacccagctctatggtagtaacacagcagggtatattgtgtgcagaggg
gtgcataaaatcgccagtactcgtttcctgatctgcagagatcttttgatcttacagcag
ctgttaatgaggcttggagatgctgctctggaatgtttttgtcaggcagcatctgaagta
ggcaaagaggaattcttggatcgcttgattcgctcagaggatggggagatcgtgtctacc
cccaggctgcagtattatgacaaggttttacgactactagatgtcattggtttgcctgaa
ctggttattcagttggctacatcagccataactgaagcaggtgatgactggaaaagtcag
gctactctaaggacatgtattttcaaacatcatttggatttgggtcacaatagccaagca
tatgaagccttaacccaaattcctgattccagcaggcaattagattgtttacggcagttg
gtggtagttctttgtgaacgctcacagctacaggatcttgtagagtttccctatgtgaat
ctgcataatgaggttgtgggaataattgagtcacgtgctagagctgtggaccttatgact
cacaattactatgaacttctgtatgcctttcacatctatcgccacaattaccgcaaggct
ggcacagtgatgtttgagtatggaatgcggcttggcagagaagttcgaactctccgggga
cttgagaaacaaggcaactgttatctggctgctctcaattgtttacgacttattcgtcca
gaatatgcgtggattgtgcagccagtgtctggtgcagtgaaggttgatgctgctgaattg
cttcgtttatacttaaactatgaccttttagaagaagctgtggatttggtgtcagaatat
gtggatgctgtattgggaaaaggacatcaatacttcggaattgagtttccactgtccgca
acagccccaatggtgtggcttccatactcctctattgatcagcttctccaagctctggga
gagaacagtgccaacagtcacaacatcgcactgtcccagaaaatacttgacaaattggag
gactaccagcaaaaagttgataaggcaacacgggatttattatatcgtcggaccttgtga