GENSCAN 1.0	Date run:  8-Nov-116	Time: 08:31:46

Sequence gi568815587r:124383344_124497351 : 114008 bp : 38.58% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   1617   1612    6                               1.05
 1.01 Sngl -   4850   3927  924  2  0   58   50   342 0.731  23.53
 1.00 Prom -   5165   5126   40                              -8.55

 2.00 Prom +   7076   7115   40                              -6.75
 2.01 Sngl +   8177   9937 1761  1  0   70   48   546 0.979  43.20
 2.02 PlyA +  10074  10079    6                              -0.45

 3.00 Prom +  10440  10479   40                              -3.65
 3.01 Init +  13328  13508  181  1  1   33  113   200 0.306  16.39
 3.02 Intr +  15362  15429   68  0  2   80   65    55 0.082   0.11
 3.03 Term +  31355  31552  198  1  0  129   48    79 0.718   4.42
 3.04 PlyA +  32622  32627    6                               1.05

 4.04 PlyA -  32949  32944    6                               1.05
 4.03 Term -  41546  40599  948  2  0  117   39   233 0.131  12.38
 4.02 Intr -  54242  54107  136  1  1   20   70   130 0.112   4.05
 4.01 Init -  57742  57042  701  1  2   75   37   385 0.042  26.60
 4.00 Prom -  61233  61194   40                              -4.75

 5.00 Prom +  62197  62236   40                              -7.25
 5.01 Sngl +  64712  64954  243  1  0   71   42   178 0.944   6.33
 5.02 PlyA +  65653  65658    6                               1.05

 6.00 Prom +  73950  73989   40                              -4.85
 6.01 Init +  76261  76369  109  0  1   58  127    20 0.327   3.33
 6.02 Intr +  76567  76660   94  2  1   22   62    96 0.401  -1.50
 6.03 Term +  77553  77784  232  0  1   84   39   164 0.548   6.06
 6.04 PlyA +  78544  78549    6                               1.05

 7.00 Prom +  79810  79849   40                              -5.05
 7.01 Init +  82816  82869   54  0  0   77  119    20 0.200   5.34
 7.02 Intr +  87050  87206  157  1  1   83   44    85 0.381   2.26
 7.03 Intr +  97871  98010  140  0  2   -4   55   170 0.161   3.76
 7.04 Term +  99258  99428  171  2  0   49   54   156 0.721   5.14
 7.05 PlyA + 100691 100696    6                               1.05

 8.02 PlyA - 102213 102208    6                               1.05
 8.01 Sngl - 105201 104554  648  0  0   86   42   277 0.993  18.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_1|307_aa
MIVYLENPIVSAQNLLKLINNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIAS
KRIKYLGIHLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIY
RFNAIPIKLPTTFFTELEKTTLKFTWNQKRARITKSTLSQKNKAGGITLPDFKLYYKATV
TKTAWYGYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAI
CRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMA
RKAKIDK

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_1|924_bp
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataaac
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaccttacaagggatgtgaaggacctcttcaaggag
aactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtgatttat
agattcaatgccatccccatcaagctaccaacgactttcttcacagaattggaaaaaact
actttaaagttcacatggaaccaaaaaagagcccgcatcaccaagtcaaccctaagccaa
aagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctacagtc
accaaaacagcatggtacgggtaccaaaacagagatatagatcaatggaacagaacagag
ccctcagaaataacgccacatatctacaactatctgatctttgacaaacctgagaaaaac
aagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatgg
attaaagacttaaatgtgagacctaaaaccataaaaaccctagaagaaaacctaggcatt
accattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggca
agaaaagccaaaattgacaaatga

>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_2|586_aa
MDKFLDAYTLPRLNQEEVESLNRPITGSEIEVISSLPTKKSPGPDGFTAEFYQRYKEELV
PFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDGKILNKILAN
QIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRTKDKNHMIISIDAEKAFDKIQ
QPFMLKSLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFN
IVLEVLARAIRQEKEIKGMQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLINNFSKVS
GYKINVQKSQTFLYTNNRQTESQIMSELPFTIASKRIKYLGIHLARDVKDLFKENYKPLL
NEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFTW
NQKRARITKSILSQKNKAGGITLPDFKLYYKATVTKTAWYGYQNRDIDQWNRTEPSEITP
HIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLIPYTKINSRWIKDLNI
RPKTPKTLEENLGITIQDIGMGKDFMSKTPKAMARKAKIDKWDLIK

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_2|1761_bp
atggataaattcctcgacgcatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggatctgaaattgaggtaatcagtagcttaccaaccaaaaag
agtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactggta
ccattccttctgaaattattccaatcaatagaaaaagagggaatcctccctaactcattt
tatgaggctagcatcatcctgataccaaagcctggcagagacacaaccaaaaaagagaat
tttagaccaatatccttgatgaacattgatggaaaaatcctcaataaaatactggcaaac
caaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctggg
atgcaaggctggttcaatatatgcaaatcaataaatgtaatccagcatataaacagaacc
aaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaa
caacccttcatgctaaaaagtctcaataaattaggtattgatgggacgtatctcaaaata
ataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaa
gcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaac
atagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtatgcaa
ttaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaa
aaccccattgtctcagcccaaaatctccttaagctgataaacaacttcagcaaagtctca
ggatacaaaatcaatgtacaaaaatcacaaacattcttatacaccaataacagacaaaca
gagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaataccta
ggaatccaccttgcaagggatgtgaaggacctcttcaaggagaactacaaaccactgctc
aatgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaaga
atcaatatcgtgaaaatggccatactgcccaaggtgatttatagattcaatgccatcccc
atcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcacatgg
aaccaaaaaagagcccgcatcaccaagtcaatcctaagccagaagaacaaagctggaggc
atcacgctacctgacttcaaactatactacaaggctacagtcaccaaaacagcatggtac
gggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacgcca
catatctacaactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggat
tccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactg
gatcccttccttataccttatacaaaaattaattcaagatggattaaagacttaaacatt
agacctaaaaccccaaaaaccctagaagaaaacctaggcattaccattcaggacataggc
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaagaaaagccaaaattgac
aaatgggatctaattaaatga

>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_3|148_aa
MKNASDNENIRNEDGTTGYHDINTHNNENNHLVDIGAGAGKLEEGEYVTQVMVDDISTAE
ENSVLTIDMCFTSTALEEEMAVKSSLHPLTLGEGGGCRRKSVDAWKTRALPVRQLVPEHN
QMFLETRKFLKGHQRSWIPALLSGSTGR

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_3|447_bp
atgaagaatgctagtgacaatgaaaacataagaaatgaggatggtacaactgggtaccat
gatattaatacccacaacaatgagaacaaccacctcgttgacataggtgctggtgcagga
aagctggaggagggggagtatgtcacacaagtaatggttgatgatattagcactgcagaa
gagaactcagtgctgaccattgatatgtgtttcacctccactgccctggaggaagaaatg
gctgtgaagagcagtctacatcctctgactttgggggaaggaggaggctgcaggagaaag
tcagtggatgcctggaagactagggcactgccggtgaggcaactggttcctgagcacaat
cagatgtttttggagactcggaaattcttaaagggacatcagaggagttggattcctgca
ttacttagtgggagcacaggtagatga

>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_4|594_aa
MAAENSSFVTQFILAGLTDQPGVQIPLFFLFLGFYVVTVVGNLGLITLIRLNSHLHTPMY
FFLYNLSFIDFCYSSVITPKMLMSFVLKKNSISYAGCMTQLFFFLFFVVSESFILSAMAY
DRYVAICNPLLYMVTMSPQVCFLLLLGVYGMGFAGAMAHTACMMGVTFCANNLVNHYMCD
ILPLLECACTSTYVNELVVFVVVGIDIGVPTVTIFISYALILSSIFHIDSTEGRTKQEGS
VYEAESGLSPDTESAAALILDFSASGTMRNKFLLFKSHLTARQERMTLRNSSSVTEFILV
GLSEQPELQLPLFLLFLGIYVFTVVGNLGLITLIGINPSLHTPMYFFLFNLSFIDLCYSC
VFTPKMLNDFVSESIISYVGCMTQLFFFCFFVNSECYVLVSMAYDRYVAICNPLLYMVTM
SPRVCFLLMFGSYVVGFAGAMAHTGSMLRLTFCDSNVIDHYLCDVLPLLQLSCTSTHVSE
LVFFIVVGVITMLSSISIVISYALILSNILCIPSAEGRSKAFSTWGSHIIAVALFFGSGT
FTYLTTSFPGSMNHGRFASVFYTNVVPMLNPSIYSLRNKDDKLALGKTLKRVLF

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_4|1785_bp
atggctgctgagaattcctccttcgtgacacagtttatcctcgcaggcttaactgaccaa
ccgggagtccagatccccctcttcttcctgtttctaggcttctacgtggtcactgtggtg
gggaacctgggcttgataaccctgataaggctcaactctcacttgcacacccctatgtac
ttcttcctctataacttgtccttcatagatttctgctattccagtgttatcactcccaaa
atgctgatgagctttgtcttaaagaagaacagcatctcctacgcagggtgtatgactcag
ctcttcttctttcttttctttgttgtctctgagtccttcatcctgtcagcaatggcgtat
gaccgctatgtggccatctgtaacccactgttgtacatggtcaccatgtctccccaggtg
tgttttctccttttgttgggtgtctatgggatggggtttgctggggccatggcccacaca
gcgtgcatgatgggtgtgaccttctgtgccaataaccttgtcaaccactacatgtgtgac
atccttccccttcttgagtgtgcttgcaccagcacctatgtgaatgagcttgtagtgttt
gttgttgtgggcattgatattggtgtgcccacagtcaccatcttcatttcctatgctctc
attctctccagcatcttccacattgattccacggagggcagaacaaaacaagaaggctct
gtctatgaggcagaaagcgggctctcaccagacacggaatctgctgctgccttaatcttg
gacttctcagcctctggaaccatgagaaataaattcctgctgtttaaaagccacctgaca
gctcgccaagagagaatgactctgagaaacagctcctcagtgactgagtttatccttgtg
ggattatcagaacagccagagctccagctccctcttttccttctattcttagggatctat
gtgttcactgtggtgggcaacttgggcttgatcaccttaattgggataaatcctagcctt
cacacccccatgtactttttcctcttcaacttgtcctttatagatctctgttattcctgt
gtgtttacccccaaaatgctgaatgactttgtttcagaaagtatcatctcttatgtggga
tgtatgactcagctatttttcttctgtttctttgtcaattctgagtgctatgtgttggta
tcaatggcctatgatcgctatgtggccatctgcaaccccctgctctacatggtcaccatg
tccccaagggtctgctttctgctgatgtttggttcctatgtggtagggtttgctggggcc
atggcccacactggaagcatgctgcgactgaccttctgtgattccaacgtcattgaccat
tatctgtgtgacgttctccccctcttgcagctctcctgcaccagcacccatgtcagtgag
ctggtatttttcattgttgttggagtaatcaccatgctatccagcataagcatcgtcatc
tcttacgctttgatactctccaacatcctctgtattccttctgcagagggcagatccaaa
gcctttagcacatggggctcccacataattgctgttgctctgttttttgggtcagggaca
ttcacctacttaacaacatcttttcctggctctatgaaccatggcagatttgcctcagtc
ttttacaccaatgtggttcccatgcttaacccttcgatctacagtttgaggaataaggat
gataaacttgccctgggcaaaaccctgaagagagtgctcttctaa

>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_5|80_aa
MQQGSGDASVMMENPRRQTLHPCLPSPDQTGPETGGTSHYRENTYSQASKAAVYLCAGPE
KEPWEPTIGQPSRLVPTSQA

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_5|243_bp
atgcagcaagggagtggagatgcatctgtgatgatggaaaatccaagaaggcagactctg
catccatgtctccccagtccagatcagactggcccagaaacaggagggacttctcattac
agggaaaatacatactcccaggccagcaaagcagctgtgtacctatgtgctggacctgag
aaagagccctgggaaccaaccataggccagccaagcagacttgtgcccacatcacaggcc
taa

>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_6|144_aa
MWVGPNKGIKPGRLSPSGNPMGLPSMLWKLYSFALHARVCGFIREVNQTKNPPEGTNSGH
SSNGHLRLCYMLMVKACDHYVAICCPLLCNVIMSHVTCSLMVAVVYTMGLVVSTIETGLI
LKLPYCELLTSRCFCDILPLMKLS

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_6|435_bp
atgtgggtggggccaaataagggaataaaacctggccgcctgagccccagtggcaacccg
atggggttaccttccatgctgtggaagctttattcttttgctcttcacgcgagggtctgt
ggcttcattcgtgaagtcaaccagaccaagaacccaccagaaggaaccaattctggacac
agttccaatgggcatctaaggttgtgttacatgctgatggtgaaggcctgtgaccactat
gttgccatctgctgccctttgctttgcaacgtcatcatgtctcatgtcacctgctccctg
atggtggctgtggtctacaccatgggactcgttgtctccacaatagagactgggctcata
ttaaaactgccctattgtgaactcctcaccagtcgctgcttctgtgacatcctccctctc
atgaaactctcctga

>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_7|173_aa
MVHVGYFLEEHQFQTYRLPGKVGEYTHTGQTRAWKMDLLVHQLSSLVQNLQNRINPYGLQ
CCQWDVGKSQGTEGFRPALCGTNVENAGKNKTIREKNGDNRHPNANGHNNKNHQQIYWLW
HPVAQTGTHPLQLGAMVLLSTARCPSLSRKPSGPAEKNVTTWSPGPSASASPP

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_7|522_bp
atggttcatgtgggctattttttggaggaacaccaatttcagacttataggctgcctggt
aaagtaggcgagtatacccacactggccagacaagagcttggaaaatggatcttttggtt
caccagctcagctctctggtgcagaatctacagaacagaataaacccatatggtttacag
tgttgtcagtgggatgtaggaaaatcacagggtactgaaggctttagacctgccctctgt
ggaactaatgtggagaatgctggaaagaataaaaccataagagagaaaaatggtgacaat
cggcaccccaatgccaacggtcacaataataaaaaccaccagcaaatttattggctgtgg
cacccagtggctcagacaggcactcacccccttcagcttggagccatggtgctgctctct
actgcccgttgcccatctctttcacggaaacccagtggccctgctgaaaagaatgtgaca
acttggagcccaggcccctctgcttctgcttctccaccttga

>gi568815587r:124383344_124497351|GENSCAN_predicted_peptide_8|215_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNRKRARIAKSILSQKNKARGITLPD
FKLYYKTTVTKTAWYWYQNRDIDQWNRTQPSEITLHIYNYLIFDKPEKNKQWGKDSLFNK
WCWENWLAICKKLKLDPFLTPYTKINSRWIKDLNIRPKTLKTLEENLGITIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTANEHFLMD

>gi568815587r:124383344_124497351|GENSCAN_predicted_CDS_8|648_bp
atggccatactgcccaaggtgatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccgaaaaagagcc
cgtattgccaagtcaatcctaagccaaaagaacaaagctagaggcatcacactacctgac
ttcaaactatactacaagactacagtaaccaaaacagcatggtactggtatcaaaacaga
gatatagatcaatggaacagaacacagccctcagaaataacgctgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtaaaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagacttaaacattagacctaaaacccta
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaatgaacacttcttaatggattaa