GENSCAN 1.0	Date run:  5-Nov-116	Time: 23:15:38

Sequence gi568815587r:10459114_10668532 : 209419 bp : 44.37% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2402   2627  226  0  1   86   76   403 0.805  35.94
 1.02 Intr +  19413  19617  205  0  1   84   74   180 0.523  15.40
 1.03 Intr +  22950  23112  163  2  1  115   80   197 0.979  21.15
 1.04 Intr +  25707  25926  220  1  1   93   87   387 0.958  36.46
 1.05 Intr +  28032  28251  220  0  1   84  100   148 0.800  13.90
 1.06 Intr +  34236  34525  290  2  2   87   33   418 0.571  32.24
 1.07 Intr +  35555  35717  163  2  1   80   25   125 0.647   5.38
 1.08 Intr +  35786  35917  132  1  0  107  113   114 0.999  16.64
 1.09 Intr +  36457  36620  164  0  2   67   83   279 0.996  24.07
 1.10 Intr +  37699  37825  127  1  1   69   92   109 0.737  10.08
 1.11 Intr +  40973  41136  164  1  2   60   96   294 0.998  26.17
 1.12 Intr +  42357  42477  121  0  1  121   86   158 0.998  19.40
 1.13 Intr +  43608  43781  174  2  0   73  116   100 0.950  11.44
 1.14 Intr +  45436  45546  111  0  0  -52   80   181 0.655   3.88
 1.15 Term +  46595  46771  177  1  0   94   42   181 0.999  11.79
 1.16 PlyA +  47990  47995    6                               1.05

 2.12 PlyA -  50010  50005    6                               1.05
 2.11 Term -  52077  52011   67  2  1   91   38    48 0.242  -2.49
 2.10 Intr -  60028  59921  108  0  0   48  115    66 0.427   4.70
 2.09 Intr -  66260  66079  182  2  2   88   71    63 0.693   3.27
 2.08 Intr -  71638  71530  109  0  1  131  100    32 0.733   8.99
 2.07 Intr -  95739  95654   86  0  2    8  116    61 0.007  -0.48
 2.06 Intr - 100184 100025  160  1  1   95    9   185 0.019  11.29
 2.05 Intr - 100781 100703   79  0  1  116   97    11 0.971   3.41
 2.04 Intr - 101687 101382  306  0  0   90   84    65 0.550   2.72
 2.03 Intr - 104966 104827  140  1  2   84  105    20 0.975   3.41
 2.02 Intr - 105261 105090  172  1  1   66   94   122 0.985   9.60
 2.01 Init - 109419 109335   85  0  1  110  100    84 0.998  10.78
 2.00 Prom - 109994 109955   40                              -4.96

 3.24 PlyA - 112144 112139    6                               1.05
 3.23 Term - 117462 117219  244  2  1   74   49    47 0.324  -5.23
 3.22 Intr - 121476 121342  135  2  0  125   75   205 0.894  22.58
 3.21 Intr - 122873 122754  120  1  0   94   84   124 0.972  12.21
 3.20 Intr - 132499 132435   65  1  2   79  106     7 0.563  -0.88
 3.19 Intr - 134486 134379  108  2  0  103  111    -7 0.778   3.58
 3.18 Intr - 135082 135033   50  2  2   92   91    -2 0.755  -1.10
 3.17 Intr - 141946 141805  142  1  1  126   95   188 0.952  23.23
 3.16 Intr - 144138 144007  132  0  0   60  109   123 0.987  12.44
 3.15 Intr - 145432 145274  159  1  0  102   48   127 0.599  10.28
 3.14 Intr - 146573 146427  147  2  0   75   75    31 0.648   0.93
 3.13 Intr - 147659 147629   31  1  1   91  107    20 0.964   2.33
 3.12 Intr - 150714 150615  100  1  1   68   93   107 0.670   8.37
 3.11 Intr - 164743 164665   79  1  1   49  100    60 0.586   2.42
 3.10 Intr - 167470 166853  618  1  0  100   90   439 0.859  37.81
 3.09 Intr - 167711 167565  147  2  0   44   93    45 0.508   1.03
 3.08 Intr - 168650 168603   48  2  0  104   76    37 0.654   2.98
 3.07 Intr - 170598 170492  107  1  2  112   97   253 0.699  28.53
 3.06 Intr - 172948 172878   71  0  2   80   82    15 0.838  -1.07
 3.05 Intr - 174958 174855  104  1  2   78   92    77 0.723   6.07
 3.04 Intr - 176399 176213  187  1  1   16   47    90 0.093  -2.61
 3.03 Intr - 182966 182843  124  0  1   90   78    62 0.252   5.04
 3.02 Intr - 185769 185601  169  0  1   50   95    18 0.115  -1.78
 3.01 Intr - 193069 192912  158  2  2   71  108   129 0.151  12.93

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  81949  82237  289  1  1   74   53   152 0.873   5.15
S.002 Term - 100184  99998  187  1  1   95   37   214 0.980  13.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:10459114_10668532|GENSCAN_predicted_peptide_1|885_aa
XEMPRQFPKLNISEVDEQVRLLAEKVFAKVLREEDSKDALSLFTVPEDCPIGQKEAKERE
LQKELAEQKSVETAKRKKSFKMIRSQSLSLQMPPQQDWKGPPAASPAMSPTTPVVTGATS
LPTPAPYAMPEFQRVTISGDYCAGITLEDYEQAAKSLAKALMIREKYARLAYHRFPRITS
QYLGHPRADTAPPEEGLPDFHPPPLPQEDPYCLDDAPPNLDYLVHMQGGILFVYDNKKML
EHQEPHSLPYPDLETYTVDMSHILALITDGPTQGWPLQMLEASKLESSMRLNYGLSPSPT
CRKTYCHRRLNFLESKFSLHEMLNEMSEFKELKSNPHRDFYNVRKVDTHIHAAACMNQKH
LLRFIKHTYQTEPDRTVAEKRGRKITLRQVFDGLHMDPYDLTVDSLDVHAVSELLLQCRQ
QTAALAGDSAPWKATMIVLAGRWGLCCSFTGGLAKGSQADRVRIHGPGAQEFLRFHARID
IEDVFRCGHTEGRLVKGRQTFHRFDKFNSKYNPVGASELRDLYLKTENYLGGEYFARMVK
EVARELEESKYQYSEPRLSIYGRSPEEWPNLAYWFIQHKVYSPNMRWIIQVPRIYDIFRS
KKLLPNFGKMLENIFLPLFKATINPQDHRELHLFLKYVTGFDSVDDESKHSDHMFSDKSP
NPDVWTSEQNPPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGEAGSITHLVSAFLT
ADNISHGLLLKKSPVLQYLYYLAQIPIAMSPLSNNSLFLEYSKNPLREFLHKGLHVSLST
DDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYYKE
GPEGNDIRKTNVAQIRMAFRYETLCNELSFLSDAMKSEEITALTN

>gi568815587r:10459114_10668532|GENSCAN_predicted_CDS_1|2658_bp
nctgagatgccgcggcagtttcccaagctgaacatctctgaagtggatgagcaagtccgg
ctcctggcggagaaggtgtttgctaaagtgctccgagaagaggacagcaaagatgccctg
tccctgttcactgtcccagaggactgccccatcgggcaaaaggaagccaaggagagggag
ctgcagaaggagctggcagagcagaagtctgtggagaccgcaaaaagaaagaaaagtttc
aagatgattcggtcccagtccctgtctctgcaaatgccgccacagcaagattggaagggc
cccccggcagccagtccggccatgtctcccacaacccctgtggtcactggagccacttcc
ctgcccacgccagcaccctatgccatgcctgagttccagcgggtcaccatcagcggagat
tactgtgccgggatcactttggaggactatgagcaggcagccaagagtctggccaaggcc
ctaatgatccgggagaagtatgcgcggctcgcctaccaccgcttcccgcggatcacatcc
cagtacctgggtcatccgcgggcggatactgcacctccggaagagggccttccagacttc
caccctcctccactgccccaggaagacccctactgcctggatgatgcaccccccaacctg
gattacttggtccacatgcaggggggcatcctctttgtgtatgataacaagaagatgctg
gagcaccaggagccgcacagcctaccctaccccgacctggagacctacacggtggacatg
agccacatcctggctctcatcaccgatggccccacccagggttggcccctgcagatgctg
gaggcctccaaactggagagctcgatgcgactcaactatggtctctccccatctccaact
tgcaggaaaacctattgtcaccggcgactgaactttctggaatccaagttcagccttcat
gagatgttaaacgaaatgtccgagttcaaagagttgaagagtaacccccaccgggacttc
tataacgtgagaaaggtggacacacacatccatgcggccgcctgcatgaaccaaaagcat
ctgctgcgcttcatcaagcacacataccagacggagcctgacaggactgtggcagagaag
cggggccggaagatcaccctgcggcaggtgtttgacggcctgcacatggacccctacgac
ctcactgtggactcactggatgtccacgcggtgagtgagcttctgctccagtgccgccag
cagacagcagccctggctggggactcagccccctggaaagccaccatgattgtgcttgcc
gggaggtggggcctctgctgttccttcacagggggccttgccaaaggatcccaagctgac
cgagtgaggatccatggtcctggtgctcaggagtttctaaggtttcatgcaagaattgac
atagaagatgtctttcggtgtggccatacagaaggccgcctcgtaaagggccggcagaca
ttccaccgctttgacaagttcaactccaaatacaaccctgtgggggccagtgagctgcgt
gacctgtatttgaaaactgaaaactatctgggaggagagtactttgctcggatggtcaag
gaggttgcccgggagctggaggagagcaagtaccagtactcagagccacggctctccatc
tacggccgcagtcctgaggagtggcccaacctggcctactggttcatccagcacaaggtc
tactctcccaacatgcgctggatcatccaggtgccccggatttatgacatatttaggtca
aagaagctgctgccaaactttgggaagatgctggagaacatcttcctgccccttttcaag
gccactatcaacccccaagatcatcgagagcttcacctcttccttaaatatgtgacgggg
tttgacagcgtggatgatgagtccaagcacagcgaccacatgttttccgacaagagccca
aacccggacgtctggaccagtgagcagaacccaccctacagctactacctgtactacatg
tatgccaacatcatggtgctcaacaacctccgcagggagcgcggcctgagcacgttcctg
ttccggccgcactgtggggaagccggctccatcacccacctggtgtctgccttcctcact
gctgacaacatttcccacgggctgctcctcaagaagagtccggtattgcagtatctctac
taccttgctcagatccccattgccatgtctcctcttagcaacaacagtttgttcctcgaa
tattccaagaaccctctgagggaattcctacacaagggactgcatgtttctctttccacc
gatgaccccatgcagttccactacacgaaggaagcacttatggaagaatatgccattgca
gctcaagtgtggaagctgagcacctgcgacctgtgtgagatcgccaggaacagcgtgctg
cagagcggcctctcgcatcaggaaaagcaaaagtttctgggacaaaattattataaagaa
ggacctgaaggaaatgatattcgaaagacaaatgtggctcagatccggatggcattccga
tatgagaccttatgcaatgagctcagcttcctgtctgatgctatgaaatcagaagagatc
accgccttgaccaactag

>gi568815587r:10459114_10668532|GENSCAN_predicted_peptide_2|497_aa
MARCFSLVLLLTSIWTTRLLVQGSLRAEELSIQVSCRIMGITLVSKKANQQLNFTEAKEA
CRLLGLSLAGKDQVETALKASFETCSYGWVGDGFVVISRISPNPKCGKNGVGVLIWKVPV
SRQFAAYCYNSSDTWTNSCIPEIITTKDPIFNTQTATQTTEFIVSDSTYSVASPYSTIPA
PTTTPPAPASTSIPRRKKLICVTEVFMETSTMSTETEPFVENKAAFKNEAAGFGGVPTAL
LVLALLFFGAAAGLGFCYVKRYVKAFPFTNKNQQKEMIETKVVKEEKANDSNPNEESKKT
DKNPEESKSPSKTTKNSRALFYLCSHTTTTVINSITKELNDKRTAKVASGQEKHLLFEVQ
PGSDSSAFWKVVVRVVCTKINKSSGIVEASRIMNLYQFIQLYKDITSQAAGVLAQSSTSE
EPDENSSSVTSCQASLWMGRVKQLTDEEECCICMDGRADLILPCAHSFCQKCIDKWQQTS
TVHSPGVVDPYPNRQQK

>gi568815587r:10459114_10668532|GENSCAN_predicted_CDS_2|1494_bp
atggccaggtgcttcagcctggtgttgcttctcacttccatctggaccacgaggctcctg
gtccaaggctctttgcgtgcagaagagctttccatccaggtgtcatgcagaattatgggg
atcacccttgtgagcaaaaaggcgaaccagcagctgaatttcacagaagctaaggaggcc
tgtaggctgctgggactaagtttggccggcaaggaccaagttgaaacagccttgaaagct
agctttgaaacttgcagctatggctgggttggagatggattcgtggtcatctctaggatt
agcccaaaccccaagtgtgggaaaaatggggtgggtgtcctgatttggaaggttccagtg
agccgacagtttgcagcctattgttacaactcatctgatacttggactaactcgtgcatt
ccagaaattatcaccaccaaagatcccatattcaacactcaaactgcaacacaaacaaca
gaatttattgtcagtgacagtacctactcggtggcatccccttactctacaatacctgcc
cctactactactcctcctgctccagcttccacttctattccacggagaaaaaaattgatt
tgtgtcacagaagtttttatggaaactagcaccatgtctacagaaactgaaccatttgtt
gaaaataaagcagcattcaagaatgaagctgctgggtttggaggtgtccccacggctctg
ctagtgcttgctctcctcttctttggtgctgcagctggtcttggattttgctatgtcaaa
aggtatgtgaaggccttcccttttacaaacaagaatcagcagaaggaaatgatcgaaacc
aaagtagtaaaggaggagaaggccaatgatagcaaccctaatgaggaatcaaagaaaact
gataaaaacccagaagagtccaagagtccaagcaaaactaccaaaaactcccgagccttg
ttttacctctgctctcacaccaccacaacagtcatcaactcaataacaaaagaactcaat
gacaaaagaacggctaaagtggcttctggccaggaaaaacatcttctctttgaggtacaa
cctgggtctgattcctctgctttttggaaagtggttgtacgggtggtctgtaccaagatt
aacaaaagcagtggcattgtggaggcatcacggatcatgaatttataccagtttattcaa
ctttataaagatatcacaagtcaagcagcaggagtattggcacagagctccacctctgaa
gaacctgatgaaaactcatcctctgtaacatcttgtcaggctagtctttggatgggaagg
gtgaagcagctgaccgatgaggaggagtgttgtatctgtatggatgggcgggctgacctc
atcctgccttgtgctcacagcttttgtcagaagtgtattgataaatggcagcagaccagt
actgtccacagcccaggggttgtggacccctaccccaacagacagcaaaaataa

>gi568815587r:10459114_10668532|GENSCAN_predicted_peptide_3|1081_aa
XCGAQASWSIFGADAAEVPGTRGHSQQEAAMPHIPEDEEPPGEPQAAQSPAGQPCPHWPT
ERFCLYLPGNSLGTVCCPTREKVCDPKDQLSVRNEMKRNQIKHVKHLEPAVCSALCWFEG
FLEEEVPSVKESAAWKNKSVRGQQGTRNQGSGASGGENISYAGALEGFGPPGKVAIETVG
THCFEAAGGSTNSGGGSNMLWDARRQAFGKGSQGPPAAGVSCSPTPTIVLTGDATSPEGE
TDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDISISEEDKKKNLA
LLEEAKLQKGDEADVSSPHPGEPLLSLGKFLAGFGLQVPFSCLFDKPRAEALSFHIVHSY
PIHTYTNGPLGKNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQY
PETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPP
ASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEE
EKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAA
EQEKAIEEEESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVEMYMDTALGMVEI
KQAFKSDSLRLNPGSVTPCHLEQVNDRSGLGLFTHKQNVFVQLSLAFRNDSYTLESRINQ
AERERNLTEENTEKELENFKASITVIVEPDSSASLWHHCEHRETYQKLLEDIAVLHRLAA
RLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGP
SEDGVPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNG
KGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEG
LKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQH
WQVIWMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTE
Q

>gi568815587r:10459114_10668532|GENSCAN_predicted_CDS_3|3246_bp
ncctgtggagcccaggcctcttggagcatctttggggctgacgcagcggaggttccgggc
acacgtggccactcccagcaggaggctgccatgccccacattcccgaggacgaggagccc
cccggagagccacaggcagcccagagccctgccggccaaccctgtcctcactggccaaca
gagaggttctgcctgtacctccctggaaactccttgggaaccgtgtgctgcccgactaga
gaaaaggtgtgtgacccaaaggatcaattatctgtcaggaatgagatgaagaggaaccag
ataaagcatgtaaaacacttggaacctgctgtgtgttcagccttgtgctggtttgagggc
ttcctggaggaagaggtaccttctgtgaaggagagtgcagcttggaagaataagagtgtc
agaggccagcagggcaccaggaaccaggggagtggggctagtggaggtgaaaacatttca
tatgcaggggctctagaaggatttggcccaccagggaaagtggcaatagagacagtgggc
acccactgctttgaagctgcgggaggcagcaccaatagtggaggtggcagcaacatgctc
tgggacgctaggaggcaggcctttggcaaaggcagtcagggtcctcctgccgcaggagta
tcttgcagtccaactcccacgattgtcctgactggggatgccacttcaccagaaggagaa
accgacaaaaacctggccaacagagttcacagtccccacaagaggctttctcaccgacac
ttgaaggtgtccactgcctccctgacatctgtggaccccgcggggcacatcattgacctg
gtgaatgaccagctgccagacatcagcatctcagaggaggacaagaagaaaaacctggcg
ctgctggaagaagccaagttgcagaagggggatgaggccgacgtctcttcacctcaccct
ggcgagcctctcctatcccttgggaaattcttggctggttttggattgcaggttccattt
tcctgtctgtttgacaaacctcgggcagaagccctctccttccacatcgtccactcatac
cccatacacacttatacaaatgggccccttggcaagaacgtccccaaagggctagctgac
aggaagcagaatgaccagaggaaagtgtctcagggcaggctggctcctcgtcctcctcca
gttgagaagtccaaagagattgcaatagaacaaaaggaaaacttcgatcccctccagtac
cccgagaccacacccaaaggcctagctcctgttacaaacagcagtgggaaaatggccctg
aacagccctcagcctggccccgtggagagcgagctggggaagcagctcttgaaaacgggc
tgggagggcagccctctgccgagaagtccaacccaggatgcggcaggagtgggtccccca
gcctcccaggggagaggcccagctggagagccgatggggcccgaggctggctccaaagct
gagcttccacccactgtgtcccggcccccgctgctgcgagggctctcctgggacagtggc
cctgaagaacctggcccccggctgcagaaagtgcttgccaagctgccactggcagaggaa
gaaaagcgttttgcaggcaaggccggcggcaagctggccaaggcccctggtctcaaagac
tttcagatacaagtgcagcccgtgcggatgcagaaactgaccaagctccgagaggagcac
atcctgatgagaaatcagaacttagtggggctcaagcttccagaccttagtgaagcagct
gagcaggaaaaagctattgaggaagaagagtcaaagagtggcttagatgtcatgcctaat
atttctgatgtgctgctgcgcaaactgcgggtccacaggagtctccctggaagtgcccct
ccactcactgaaaaggaagttgagatgtatatggacacagctctcggcatggtggaaata
aaacaggctttcaaatcagacagtctgaggttaaatcctggctccgttactccgtgtcac
cttgaacaagttaatgaccgttctggtcttggcctctttacccataaacagaacgtgttt
gtgcaactgtccttggcctttagaaatgacagctacactctggaatctagaattaaccag
gctgaaagggaacgcaacctgacagaggagaacactgagaaagaactggaaaacttcaaa
gcttccattacggtaattgtggagcctgattcctcagcttcactctggcaccactgtgag
caccgggaaacctaccagaagttgctggaggacatcgctgtcctgcaccgcctggctgcc
cgcctctccagccgagctgaggtggtaggcgccgtccgccaggaaaagcgcatgtcgaaa
gcaacggaagtgatgatgcagtatgtggagaatctaaagaggacgtatgagaaggaccat
gcggagctcatggagtttaaaaagcttgcaaatcagaattcaagccgcagctgtggcccc
tctgaagatggggtccctcgcacggcacggtccatgtccctcacgctgggaaagaatatg
cctcgccggagggtcagcgttgctgtggttcctaagtttaatgccctgaatctgcctggc
caaactcccagctcatcatccattccctccttaccagccttgtcggaatcacccaatggg
aaaggcagcctacctgtcacttcagcactgcctgcacttttggaaaatggaaagacaaat
ggggacccagattgtgaagcctctgctcctgcgctgaccctgagctgcctggaggagctt
agtcaggagaccaaggccaggatggaggaagaagcctacagcaagggattccaagaaggt
ctaaagaagaccaaagaacttcaagacctgaaggaggaggaggaagaacagaagagtgag
agtcctgaggaacctgaagaggtagaagaaactgaggaagaggaaaagggcccaagaagc
agcaaacttgaagaattggtccatttcttacaagtcatgtatcccaaactgtgtcagcac
tggcaagtgatctggatgatggctgcagtgatgctggtcttgactgttgtgctggggctc
tacaattcctataactcttgtgcagagcaggctgatgggccccttggaagatccacttgc
tcggcagcccagagggactcctggtggagctcaggactccagcatgagcagcctacagag
cagtag