GENSCAN 1.0	Date run:  8-Nov-116	Time: 08:26:29

Sequence gi568815587r:1_187586 : 187586 bp : 41.46% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  60855  61016  162  2  0   65   85    75 0.632   4.68
 1.02 Intr +  68654  68739   86  1  2   68   63    64 0.731  -0.40
 1.03 Intr +  70388  70705  318  2  0  103   41   154 0.024   6.35
 1.04 Intr +  77682  77866  185  0  2   46   50   154 0.017   5.91
 1.05 Intr +  78253  78337   85  2  1   72  100    72 0.071   4.76
 1.06 Term +  78508  78850  343  1  1  -28   38   286 0.069   5.00
 1.07 PlyA +  79077  79082    6                               1.05

 2.00 Prom +  79611  79650   40                              -7.05
 2.01 Init +  80554  80718  165  0  0   74   72    69 0.236   3.60
 2.02 Intr +  87212  87334  123  1  0   11   40   167 0.518   4.06
 2.03 Intr +  89182  89268   87  0  0   49  101    92 0.616   5.85
 2.04 Term +  90903  91052  150  2  0   41   48   103 0.804  -1.47
 2.05 PlyA +  91067  91072    6                               1.05

 3.00 Prom +  94251  94290   40                              -6.95
 3.01 Sngl +  95389  95577  189  0  0   72   42   206 0.958   9.26
 3.02 PlyA +  95595  95600    6                               1.05

 4.04 PlyA -  95671  95666    6                               1.05
 4.03 Term -  96848  96741  108  2  0   68   41    61 0.092  -3.07
 4.02 Intr - 100931 100701  231  2  0   83   60   183 0.248  12.05
 4.01 Init - 101734 101702   33  1  0   84   82    -4 0.381  -1.47
 4.00 Prom - 105981 105942   40                              -2.55

 5.00 Prom + 111852 111891   40                              -6.95
 5.01 Init + 111973 112026   54  0  0   95   43    47 0.412   2.23
 5.02 Intr + 123361 123705  345  0  0   36   42   287 0.791  13.56
 5.03 Intr + 123792 124206  415  2  1  -10   21   434 0.306  19.65
 5.04 Intr + 124218 124503  286  1  1   56   68   236 0.595  13.88
 5.05 Intr + 124805 125033  229  2  1   61   16   194 0.645   6.45
 5.06 Intr + 125339 125520  182  1  2   91   76   163 0.702  13.14
 5.07 Intr + 125550 125692  143  0  2   50   -6   104 0.173  -3.72
 5.08 Intr + 126628 126837  210  2  0   96  109    83 0.549   9.16
 5.09 Intr + 131789 131916  128  0  2   26   98    47 0.000  -1.02
 5.10 Intr + 135088 135339  252  0  0   -8   98   153 0.072   3.41
 5.11 Intr + 144115 144241  127  0  1   38  113   118 0.706   8.63
 5.12 Term + 150713 150801   89  0  2  130   43    52 0.636   1.74
 5.13 PlyA + 151598 151603    6                               1.05

 6.06 PlyA - 154968 154963    6                               1.05
 6.05 Term - 157695 157612   84  0  0   99   38    88 0.685   1.57
 6.04 Intr - 163400 163296  105  2  0   42   80   108 0.358   4.89
 6.03 Intr - 164460 164439   22  2  1   99   98     3 0.570  -0.97
 6.02 Intr - 167884 167753  132  0  0  115   94    44 0.894   6.54
 6.01 Init - 169052 168943  110  2  2   68  119    27 0.538   3.55
 6.00 Prom - 176616 176577   40                              -3.85

 7.04 PlyA - 176938 176933    6                               1.05
 7.03 Term - 177995 177823  173  0  2   70   39    98 0.425   0.11
 7.02 Intr - 180404 180209  196  2  1   59   97   149 0.916  10.97
 7.01 Intr - 184955 184840  116  0  2  111   72    22 0.778   2.15

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 135323 135175  149  2  2   66  105   112 0.817  10.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:1_187586|GENSCAN_predicted_peptide_1|392_aa
MILHCQVIAPKIWFSSTLSDYRKPETRLGAKDAKMNETSSLPSKSLLSSGRVTHAWSQHG
ERLGDAVKQRHWEQLQTFSQTRKDMDEAGSHHPQQTNTGKENQTPHVLSRKRELNNESKH
MDTWRGTTHTRASQRDRGRRPSGQTRGYMEGNNTHQGLSGGQGVGDHQDKHVDTWRGTTH
TRASQGDRGAPRGKGGCGHSFSRLKASLKSLMALKRAADLPAQYSSSDKGQTASSSGSLT
PVYPDWETPPRSQLLTSKGTKENWTENEFDELREVGFRSMHKDQALIRSSGRKISETEYQ
LNEINQEDKIREKRMKRNEQSLQEIWDYVKRPNLRLIAVPESDGENGTKLENTLRDIIQE
NFPNLARQANIQIQKYGEHHKDTPQEKQPQDT

>gi568815587r:1_187586|GENSCAN_predicted_CDS_1|1179_bp
atgatactgcattgtcaagtcattgctccaaaaatatggtttagctcaacactgagtgac
tataggaaaccagaaaccaggctgggcgctaaagatgcaaagatgaatgagacatcatct
ctgccgtccaaaagcttactgtctagtgggagagttacacacgcctggagtcaacatggg
gagaggcttggagatgctgtgaagcaaagacactgggaacagctgcagacattttcccag
accaggaaggacatggatgaagctggaagccatcaccctcagcaaactaacacaggaaaa
gaaaaccaaacaccacatgttctcagtcgtaagagggagttgaacaatgagagcaaacac
atggatacatggaggggaacaacacacaccagggcctctcagcgggacaggggtaggaga
ccatcaggacaaacacgtggatacatggaggggaacaacacacaccagggcctctcaggg
ggacagggggtaggagaccatcaagacaaacacgtggatacatggaggggaacaacacac
accagggcctctcagggggacaggggagcacctaggggaaagggcggctgtgggcacagc
ttcagcagacttaaagcatctttgaaaagcctgatggctctgaagagagcagcagatctc
cctgcacagtattcgagctctgataagggtcagactgcctcctcaagtgggtccctgacc
cccgtgtatcctgactgggagacacctcccagatcacaactcctcaccagcaagggaaca
aaagaaaactggacagagaatgagtttgacgaattgagagaagtaggtttcagaagcatg
cacaaggatcaagcactgattcggtcaagcggaagaaagatatcagagactgaatatcaa
cttaatgaaataaatcaagaagacaagattagagaaaaaagaatgaaaagaaatgaacaa
agcctccaagaaatatgggactatgtgaaacgaccaaatctacgtttgattgctgtacct
gaaagtgatggggagaatggaaccaagttagaaaacactcttcgggatattatccaggag
aacttccctaacctagcaaggcaggccaatattcaaattcagaaatatggagaacatcac
aaagacactcctcaagaaaagcaaccccaagacacatag

>gi568815587r:1_187586|GENSCAN_predicted_peptide_2|174_aa
MDKFLDTYALPRLNQEEVESLNRPITRSEIVAVINSLPTKKQSRTRWIHSRILPEGHITV
KGHGYEQHHLHTTNDVDEEDLSDAASKGDDFALSEQSQDAHFLQPEAYGLGEGAETATGT
AHQGNDATEFDFGNFSPLIHSFGDATDFDIGLHLKGERKGSCFYYRPVGLTEFL

>gi568815587r:1_187586|GENSCAN_predicted_CDS_2|525_bp
atggacaaattcctggacacatacgccctcccaagactaaaccaggaagaagttgaatcc
ctgaatagaccaataacaaggtctgaaattgtggcagtaattaatagcctaccaaccaaa
aaacagtccaggaccagatggattcacagccgaattctaccagagggccacataactgtc
aaaggccatggctatgagcagcaccatctccacaccaccaatgacgtggatgaagaagat
ttgagcgatgcagcctccaaaggagatgactttgcactttctgaacagtctcaagatgca
cactttttacaaccagaagcctatggactgggtgagggagcagaaacagccacaggtact
gcccatcagggtaatgatgctactgagtttgactttgggaatttctcacctttaatacac
tcatttggggatgctacggactttgacattgggttgcatttaaagggggagagaaagggc
agttgcttctattatcgccctgttggactcacagagtttctttga

>gi568815587r:1_187586|GENSCAN_predicted_peptide_3|62_aa
MNQIQYGITADIHTELHKTGRELLITAPEGSGQSDALEIRECQTEITRPGELPPMVILVF
PG

>gi568815587r:1_187586|GENSCAN_predicted_CDS_3|189_bp
atgaaccagatccagtacggcatcactgcagacatacacacagagctgcataaaacagga
agagagctgctaatcacagccccagagggtagtggccaaagtgatgccttggagatccga
gaatgccagactgagatcacacggcctggggaattaccgcctatggtcattttggttttc
ccgggatag

>gi568815587r:1_187586|GENSCAN_predicted_peptide_4|123_aa
MIVRPPHPPGNPRDLVLCVPAAPATAKRGQGTAQAMASEGASLKLWQLPCGVEPVDSRKS
RIEVWEPPPRFQRMYGNAWISRQKFAAGILVKGYCGGGAGGSKYDGRQTSFGILSPKHSH
LLE

>gi568815587r:1_187586|GENSCAN_predicted_CDS_4|372_bp
atgattgtgaggcctccccatccacctggaaatcctagggacttggtgctctgtgtccca
gctgctccagccacagctaaaaggggtcaaggtacagctcaggccatggcttcagagggt
gcaagcctcaagctttggcagcttccatgtggtgttgagcctgtggattcacggaagtcc
agaatcgaggtatgggaacctccacctagatttcagagaatgtatggaaatgcctggatc
tccagacagaagtttgctgcagggatacttgtgaaaggatattgtggaggaggagctggg
ggtagtaagtatgatggaaggcagacgagttttggaatcttgtctccaaaacactctcat
ctgttagaatga

>gi568815587r:1_187586|GENSCAN_predicted_peptide_5|819_aa
MKKCRAKGKESLIKPSNLHVRVEECGRSLCGRVLLVLHRLPDPSLQPHEAQQPASHSVAS
NQRKQPAKLAAVAHERPPGGTGSVDPGRPPGATCPESPGPATPHTLGVVEPGKTSPPTME
EEPWAPQGSPCWTAQSLSALRKEQDSSSEKDGRSPNKSDKYHIRWPMSGAHDLQQAAPGP
GGAHQGHPNQDNRTVSQMLSERWYTLGPNEMQKYNLAFQVKVAHLQQGPKEVQLRGQAHK
PGASRSVTRARGSGAYQRRALPLPLGRPLNSSQTLQSSDAKEQLLWGRTAAHSQGTWLSL
AQAFSHSGVHSLDGREIDRQALRELTQVVSGTASYSGPKPSTQHGAPGHFAAPGEGGDPW
AALLPPTFWQSMVTPCPPPTHTRMLPPQPWHPPPSYWAQEPSKPRSLVNAAERAPYGPNP
WGWGPRDAFQGGLFPPNGSCHLLVEKPRTGSGNRRPRRRCPLHCTYPGPVPALIMQLFQA
HCFFLSTRPQPPSRPTMHTSSPPSPVGVLTAPHLAQTLDAALAAPPLLLPESHVKLRVGA
GAAVVPVGGRSTVPGESWAVSLLRAPVHTMNCGTFRAFHFSENSSCWGYKMECEEGLGPQ
GGACGLGGVHAPLLSPEGLDSGVGDPCSSASKATLPTPVFTVVKGSNHLAPKACASAGIS
SQSTVELRRECEQRGVAVNTDEASLTPSLDTTHLLLCGSLRLHGSGVGDPCSSASKTTLP
TPVFTVVKGSNHLAPKACASAGISSQSTPKQQSKTLSLKRKENKCKFLSLCECSQVGGEI
DNNKRALNNDGLGFNVTLTGSFSPSPEELPIALDACTII

>gi568815587r:1_187586|GENSCAN_predicted_CDS_5|2460_bp
atgaagaagtgccgagcaaaggggaaagaatcccttataaaaccatcaaatctccatgtt
cgtgtggaggaatgtggaaggtcactctgcggccgtgttctcctggtactccatcgcctt
cctgacccctccctgcagccacacgaggcccagcaacctgccagtcactcagtggcctcc
aaccagagaaaacaacctgccaagttggcagctgttgctcatgagcgtccaccaggtggg
acagggagtgttgaccctgggcggccccctggagccacctgccctgaaagcccagggccc
gcaaccccacacactttgggggtggtggaacctggtaaaacctcacctcccaccatggag
gaggagccctgggcccctcaggggagtccctgctggacagcccagtccctcagtgccctg
cgcaaggaacaggactcatcttctgagaaggatggacgcagccccaacaaatcagacaag
taccacatccggtggcccatgagtggcgctcatgatcttcagcaggcggcaccaggccct
ggcggggcgcaccagggtcaccccaaccaggataaccggaccgtcagccagatgctgagc
gagcggtggtacaccctggggcccaatgagatgcagaaatacaacctggccttccaggtg
aaggtggcccacttgcaacaaggaccgaaagaagtccagctcagaggccaagcccacaag
ccaggggctagcaggagtgtaacaagggctcgtgggagcggagcatatcagagacgggca
ctgccactgcccctggggcgtcctctgaactcctcccaaacactccagagctcggatgcc
aaggagcagcttctgtggggcagaacggctgcacacagtcagggaacctggctcagcctg
gcccaagccttctcccacagcggggtacacagcctggacggcagggaaatagaccgtcag
gcactacgggaactgacacaggtggtgtctggcactgcatcatactctggcccaaagcct
tctactcagcatggagctccaggccactttgcagcccctggtgagggaggtgacccgtgg
gcagccctgctgccgcccaccttttggcagtctatggtcacaccctgtcctcctcctaca
catactcggatgcttcctcctcaaccttggcacccacctccttcttactgggcccaggag
ccttcaaagcccaggagtctggtcaacgcagcagagcgggccccctacggccccaacccc
tggggatgggggcccagggacgccttccaaggtggcctgtttcctcccaatggatcctgc
caccttctggtggagaagccgaggacaggctcagggaaccggagaccgagaaggcgctgt
cctcttcactgcacgtaccctggaccagtgccggccctgatcatgcagctcttccaggcc
cactgcttcttcctgtccactaggccacagccgccctccaggcccactatgcacacatcc
tcccctccaagccctgtgggggtcctgaccgcacctcacctggctcagactcttgacgct
gccctggctgccccaccactgcttctgcccgagagtcacgtgaagctgagagtaggggca
ggggcagcagtggtgccagttggggggcggtccactgtgccgggggaaagctgggcagtt
tccctcctccgagcccctgtacataccatgaattgtgggaccttcagagcttttcacttt
tcggaaaatagctcctgctggggctacaagatggagtgtgaagagggccttgggccacag
ggaggcgcctgtggactagggggagttcatgcaccccttctttccccagaggggctggac
tcaggggttggggacccctgctcaagtgcatccaaagcgacccttcccacaccagtcttc
acagtggtcaagggcagcaaccacttagctcccaaggcatgtgcctcagctggcatttcg
tcacaatcaacagtggagctcaggcgggaatgtgagcaaaggggagtggctgtaaataca
gacgaagcttccctcactccctcactcgacaccactcacctcctgctgtgtggctccttg
cggctccatggctcaggggttggggacccctgctcaagtgcatccaaaacgacccttccc
acaccagtcttcacagtggtcaagggcagcaaccacttagctcccaaggcatgtgcctca
gctggcatttcgtcacaatcaacacctaagcaacagagcaagacgctgtctctgaaaagg
aaagaaaacaaatgcaagtttttatcactttgtgagtgtagccaagttggaggagaaata
gacaataataaaagagcactgaataatgacggacttggcttcaatgtcaccttaactgga
agcttctctccctctccagaagagcttccgattgcacttgatgcatgcactattatttga

>gi568815587r:1_187586|GENSCAN_predicted_peptide_6|150_aa
MMIIPHLLRDKDQRATTATSPRTRQCWGTENEGVQLWPSQSSGGDETHLPLSLWARLVPG
ASVDRGHAPGLPKLEKAARLRSEGQNSTGCVIEKQLLLGFQRNGIIVSLIYVNKLKNCLK
ENMWDDAARRPLPDAGPSTLDFLTSRTVKK

>gi568815587r:1_187586|GENSCAN_predicted_CDS_6|453_bp
atgatgattattccccaccttctaagagacaaagaccaacgagccaccacagccaccagt
cccagaacccgccaatgctggggaacggaaaatgagggagttcaactctggccctcacaa
tccagtggaggagacgaaactcatctgcctctgtccctctgggcacgcctcgtgccaggt
gcatctgtggacaggggccatgctcctgggcttccaaagttggagaaagctgccaggctc
aggtctgaaggccagaattctacaggatgtgttattgagaagcaacttttgcttggtttt
cagagaaatggaatcatcgtatcgctgatctacgtaaacaaactgaagaattgtctgaaa
gaaaatatgtgggatgatgcagcaagaagacccttaccagatgcaggcccctcaaccttg
gacttcctaacatccagaactgttaagaaataa

>gi568815587r:1_187586|GENSCAN_predicted_peptide_7|161_aa
XSYLGSHRTFSHHVRLFLAVTVSQTLLLRTWNSVRRIGQVFQDSQEGAHIRRETVSKSVC
AEPWRHQRARDPAPTNFPLKCQKQRGASTSSGQHGGRVNLVFFIDTSYTANFSNCVITCK
FQGPNLETNWHFHISPPPGDWQQTTVNLQPGSARGGASKTT

>gi568815587r:1_187586|GENSCAN_predicted_CDS_7|486_bp
ngatcctatctaggatcccataggacatttagtcatcatgtcaggctcttcttggctgtg
acagtctctcagactttacttctgaggacctggaacagtgttaggaggattggtcaggta
tttcaggacagccaggagggggcgcacatccgccgagaaactgtgagcaagagcgtctgt
gctgaaccatggcgccaccagagggcgcgcgatcccgccccaaccaacttcccgctgaag
tgccagaagcagcgaggagcttcaacttcctcagggcagcacgggggtcgtgttaatttg
gtgttcttcattgacacttcctatactgcaaacttttccaactgtgtgattacttgtaag
ttccagggaccaaaccttgaaacaaactggcacttccatatctctcccccaccaggagat
tggcagcagacaacagtcaatttacaacctggctctgcccgtggtggtgctagcaagacc
acctaa