GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:02:09

Sequence gi568815587f:73705025_73964367 : 259343 bp : 43.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 Intr -   2489   2396   94  1  1   73  111    53 0.022   6.07
 1.11 Intr -   6245   6135  111  1  0   25   34   139 0.018   1.69
 1.10 Intr -  11338  11227  112  2  1   89   64    70 0.925   4.14
 1.09 Intr -  13866  13761  106  0  1   90   58    99 0.962   6.89
 1.08 Intr -  15875  15822   54  2  0  126   79    44 0.907   6.48
 1.07 Intr -  36497  36430   68  0  2  101   95    33 0.051   3.92
 1.06 Intr -  55161  55024  138  1  0   95   81    42 0.625   4.64
 1.05 Intr -  55618  55542   77  0  2   34  101    90 0.633   4.06
 1.04 Intr -  55812  55661  152  0  2   53   18   124 0.566   0.86
 1.03 Intr -  56441  56309  133  1  1  152   92    50 0.731  12.45
 1.02 Intr -  92304  92059  246  2  0   67   81   135 0.697   7.27
 1.01 Init -  92620  92547   74  1  2   87   55   103 0.672   5.50
 1.00 Prom -  97035  96996   40                              -5.06

 2.00 Prom + 102521 102560   40                              -4.46
 2.01 Init + 103476 103479    4  2  1   89   72     0 0.080  -1.34
 2.02 Intr + 120684 120772   89  1  2  105   82    76 0.661   8.39
 2.03 Intr + 139783 139952  170  0  2  116   86   109 0.991  12.24
 2.04 Intr + 154883 154985  103  2  1   99   96    69 0.981   8.98
 2.05 Intr + 158148 158237   90  2  0   91   92    24 0.750   3.29
 2.06 Term + 159272 159346   75  1  0  110   37   121 0.998   7.04
 2.07 PlyA + 159557 159562    6                               1.05

 3.03 PlyA - 160078 160073    6                               1.05
 3.02 Term - 168355 168091  265  0  1   68   53   231 0.111  12.58
 3.01 Init - 182051 181960   92  2  2   76   81    59 0.640   3.97
 3.00 Prom - 182515 182476   40                              -4.86

 4.00 Prom + 185000 185039   40                              -5.36
 4.01 Init + 195324 195396   73  2  1   68   64    74 0.456   4.23
 4.02 Intr + 204375 204569  195  1  0   66  100   117 0.953  10.09
 4.03 Intr + 219591 219673   83  1  2  123   87    36 0.762   6.36
 4.04 Intr + 226155 226301  147  2  0   59   47   102 0.312   3.63
 4.05 Term + 231033 231068   36  2  0  109   49    73 0.741   2.84
 4.06 PlyA + 234612 234617    6                               1.05

 5.02 PlyA - 235851 235846    6                               1.05
 5.01 Sngl - 241530 241186  345  0  0   82   42   220 0.366  12.84
 5.00 Prom - 242247 242208   40                              -5.66

 6.00 Prom + 245221 245260   40                              -8.86
 6.01 Init + 246046 246113   68  0  2   96   88    58 0.955   7.14
 6.02 Intr + 252380 252544  165  2  0   76   55    62 0.529   0.78
 6.03 Intr + 253293 253396  104  0  2  113   84   120 0.937  13.92
 6.04 Intr + 254470 254631  162  2  0   30   83   229 0.983  16.55
 6.05 Term + 256484 256704  221  0  2   71   43   133 0.989   4.30
 6.06 PlyA + 258164 258169    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   6245   6092  154  1  1   25   49   162 0.808   3.39
S.002 Init +  74471  74614  144  1  0  101   77    91 0.860   7.68
S.003 Term -  91373  91139  235  1  1   40   36   120 0.833  -2.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:73705025_73964367|GENSCAN_predicted_peptide_1|455_aa
MPAAAAGRAAAGAGTGTGSLRGRTRSQVLVLQPEQMEYADKRRVSKTKKSFIEWQNSSEE
DLGVGSSSLQAGRLNVFPALSREVSRVDSSSLQPVVPMSVQLWLSPRLRGATLLMAATVL
RFPQLEGCARSHAATSLACGLALSPFRLAHYATLPGGGGGCQSVESPAALQPGSSTGPCR
GRESSVPALPLAFFVSWLEQHRSTMSTGGDFGNPLRKFKLVFLGEQSVPQLCEAHSGKPH
SRERALFNLGQGGWDLGVVFPRGLALRSADVVEDFCVDMFSALLGKYQGAWSLDHMATIG
IDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKW
IDDVRTERGSDVIIMLVGNKTDLADKSWTAAVELSIKYFQEKLQQDLEAEHGRGRGYSPH
TTVLQVSIEEGERKAKELNVMFIETSAKAGYNVKQ

>gi568815587f:73705025_73964367|GENSCAN_predicted_CDS_1|1365_bp
atgccggctgctgcagcagggcgggcagctgcaggtgctggcacaggcactggctctctg
cgaggccggaccaggtcccaagttcttgtcctgcaaccagaacaaatggagtatgcagac
aagcggagggtgagcaagacaaagaagagctttattgagtggcagaatagctcagaggag
gaccttggagtgggcagctcctctctgcaggcaggtcgtctgaatgtcttcccagctctc
agcagagaagtctctagagtggatagctcctctctgcagccggttgtcccgatgtctgtt
cagctctggctgagcccaaggctgagaggcgccacacttcttatggccgccacagtgctc
cgctttccacagctcgagggctgcgcgcgctctcacgctgccacctcactcgcgtgtggg
ctcgccctcagccccttccgattggctcattatgctactctgccgggaggcggcggcggc
tgccagtctgtggagagtcctgctgccctccagccgggctcctccaccgggccttgcagg
ggccgagagagctcggtgcccgcccttccgctcgcctttttcgtcagctggctggagcag
catcgttccacaatgtccacgggcggagacttcgggaatccgctgaggaaattcaagctg
gtgttcctgggggagcaaagcgttcctcagctctgtgaggcccactcagggaagccccac
tcccgagagcgggccctcttcaaccttggccaaggagggtgggatctgggcgttgttttc
cccagaggcttggccctgcgaagtgctgatgtcgtggaagatttttgtgtggacatgttt
tcagctcttttgggtaaataccaaggagcatggtcgctggatcatatggcaacaattggc
attgactttttatcaaaaactatgtacttggaggatcgaacaatcaggcttcagctgtgg
gatactgcgggtcaggaacgtttccgtagcctcattcccagttacatccgtgattctgct
gcagctgtagtagtttacgatatcacaaatgttaactcattccagcaaactacaaagtgg
attgatgatgtcagaacagaaagaggaagtgatgttatcatcatgctagtaggaaataaa
acagatcttgctgacaagagctggactgctgctgtggagctcagcatcaagtacttccag
gagaagcttcagcaggacctagaggcagagcatggtagaggtagaggatacagccctcat
accaccgtgctgcaagtgtcaattgaggagggagagaggaaagccaaagagctgaatgtt
atgtttattgaaactagtgcaaaagctggatacaatgtaaagcag

>gi568815587f:73705025_73964367|GENSCAN_predicted_peptide_2|176_aa
MGGILLSISRPYKTKPTHGIGKYKHLIKAEEPKKKKGKVEVRAINLGTDYEYGVLNIHLT
AYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLDSVLTTHERV
VQISGLSATFAEIFLEIIQSSLPEGVRLSVKEHTEEDFKGRFKARPELEELLAKLK

>gi568815587f:73705025_73964367|GENSCAN_predicted_CDS_2|531_bp
atgggtggaattctactaagtatcagtcggccctacaagacaaagcccacccacggcatt
ggaaagtacaagcacttaattaaagcagaagagcccaagaagaagaagggaaaagtggaa
gtgagagccattaatttggggacagattatgaatatggggttttaaatattcatctgact
gcatatgatatgaccctggcagagagttatgcccagtatgttcacaacctctgcaactct
ctctccattaaagtcgaggaaagttatgcaatgccaaccaaaaccatagaagtgttgcag
ttgcaggaccaaggcagcaaaatgctcctggactcagtgcttaccacccatgagcgagtg
gttcagatcagcggtttgagtgctacgtttgcagaaattttcttggaaataatccaaagc
agtcttcctgaaggagtcagactgtcagtgaaggagcacactgaagaagacttcaaggga
cgattcaaagctcgaccagaactggaagaactgttggccaagttgaagtag

>gi568815587f:73705025_73964367|GENSCAN_predicted_peptide_3|118_aa
MAPASASDESLRLLPLMAEGEGEPVYAEITWMSTSVPQGHTWTQRVKKDDEEEDPLDQLI
SRSGCAASHFAVQECMAQHQDWRQCQPQVQAFKDCMSEQQARRQEELQRRQEQAGAHH

>gi568815587f:73705025_73964367|GENSCAN_predicted_CDS_3|357_bp
atggcaccagcatctgcttctgatgagagcctcaggctgcttccactcatggcagaagga
gaaggggagccagtgtatgcagagatcacatggatgtcaacctcagtccctcaaggccat
acctggacccaacgggtgaagaaagacgatgaggaggaggacccgctggaccagctgatc
tcccgctctggctgtgctgcctcccactttgcagtgcaggagtgcatggcccagcaccag
gactggcggcaatgccagccacaggtgcaggcgttcaaggattgcatgagtgaacagcag
gcgaggcggcaagaggagctgcagaggaggcaagaacaagccggtgcccaccactga

>gi568815587f:73705025_73964367|GENSCAN_predicted_peptide_4|177_aa
MDAQLKIWSAEDASCVVTFKGHKGGILDTAIVDRGRNVVSASRDGTARLWDCGRSACLGV
LADCGSSINGVAVGAADNSINLGSPEQMPSDGSCFIVQQDLDYVTELTGADCDPVYKGSL
FYIATTFVRSFSYVSRVDVLVVIYAVTLDSCSEIQTQTEGKETSSQKTAIVIMAHSQ

>gi568815587f:73705025_73964367|GENSCAN_predicted_CDS_4|534_bp
atggatgcccagctgaagatatggtcagctgaagatgctagctgcgtggtgaccttcaaa
ggtcacaaaggaggtatcctggatacagccatcgttgatcgggggaggaatgtggtgtct
gcttctcgagatgggacagcacgactttgggattgtgggcgctcagcctgcttgggagtc
cttgcagattgtggttcttctatcaatggagtggcggtgggtgctgctgacaactccata
aaccttggctcccctgagcagatgcccagtgatggaagctgttttattgtccagcaagac
ttagactatgtcactgagctcactggggctgactgtgaccctgtgtacaagggctcactc
ttctacattgccaccacattcgtccgctccttttcatacgtctccagagtcgatgtcctg
gttgtgatatatgcagtgacccttgacagctgctctgaaatccagacccaaacagaagga
aaggagaccagctctcagaaaaccgccatcgtcatcatggcccattctcaatga

>gi568815587f:73705025_73964367|GENSCAN_predicted_peptide_5|114_aa
MELDEWERTGRDFKKAYKDGAKIPVSVWSVWALIKAAPEPFQTDDEADSDEEEEDECKKL
TSDSEREAQEPEEIIEKKGKLKKTYFTGPSAPPAELSEWPPPPSPTMGEKVKQL

>gi568815587f:73705025_73964367|GENSCAN_predicted_CDS_5|345_bp
atggagttggatgaatgggaaagaactggcagagattttaaaaaggcatataaagatgga
gccaaaattccagtttctgtttggtcagtgtgggcgttaataaaggcagctcctgagcca
tttcaaacagatgatgaggcagattcagatgaagaagaggaggatgagtgtaagaaacta
acatcagattctgaacgcgaggcacaggagccggaggaaatcatagaaaagaaaggaaag
ctgaaaaagacatattttactggtccatcagctccgcctgctgaattaagtgaatggcca
cctcctccctctcccacaatgggtgagaaagtgaagcagctgtaa

>gi568815587f:73705025_73964367|GENSCAN_predicted_peptide_6|239_aa
MGQDYYSVLGITRNSEDAQIKQATWANGPFIKLSTNHPIRSISPPPRVTADTYSQTLRCL
PFRNRPAGTTCINPPSSRYRRLALKHHPLKSNEPSSAEIFRQIAEAYDVLSDPMKRGIYD
KFGEEGLKGGIPLEFGSQTPWTTGYVFHGKPEKVFHEFFGGNNPFSGMKLVGGPTKAAAE
KPSVSTTVPTSSRQSHGEMPAAFFLPPKQLRNYLMNRIQSQNLSCKRVWGMFLLALQIL

>gi568815587f:73705025_73964367|GENSCAN_predicted_CDS_6|720_bp
atgggccaggattattactctgtgctcgggatcactcgcaattcagaggatgcccagatc
aagcaggccacctgggcgaatggtccctttattaagctctccacaaaccacccaatccgc
tccatctctcccccaccccgggtcactgccgatacatattctcagacgctgcgatgtctg
cccttcagaaacaggccagctggtacgacttgtatcaaccctccctcctccaggtaccgc
agactcgcccttaagcaccacccgttgaagtcaaatgagccgtcttcagcagagattttc
aggcaaatagcagaggcctacgacgtgctgagtgaccccatgaagagaggcatctacgac
aagtttggagaagagggcctgaagggtgggattcctttggagtttggatcccagacccca
tggacaactggttacgtcttccatggcaaacctgaaaaggtgttccacgagttctttggt
ggaaacaaccccttcagtggcatgaaactcgtgggtggacccacaaaggctgctgcagaa
aaacctagtgtctccacaacagtgcccaccagctccagacagagccacggagagatgcct
gccgccttcttcctgcctcccaagcagctcaggaactacctgatgaacagaattcaaagc
cagaaccttagctgcaagagagtctgggggatgttccttttggctctacagattctctag