GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:50:01

Sequence gi568815587f:58522753_58724519 : 201767 bp : 38.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    987   1129  143  1  2   36   97    75 0.437   2.35
 1.02 Term +   4672   4980  309  0  0   35   44   329 0.550  17.28
 1.03 PlyA +   5586   5591    6                               1.05

 2.11 PlyA -   5851   5846    6                               1.05
 2.10 Term -   9347   9112  236  0  2   38   49   213 0.003   7.90
 2.09 Intr -  10189  10058  132  2  0   36   39   165 0.003   6.10
 2.08 Intr -  27115  27034   82  1  1  108   86    15 0.185   1.59
 2.07 Intr -  27394  27221  174  1  0   93   95   115 0.976  11.91
 2.06 Intr -  28480  28313  168  1  0   69  100   124 0.984  10.92
 2.05 Intr -  32188  32089  100  0  1  106  113   152 0.973  18.69
 2.04 Intr -  41449  41403   47  1  2   54   68    43 0.048  -4.81
 2.03 Intr -  47961  47804  158  1  2   83   56   131 0.521   8.21
 2.02 Intr -  51382  51258  125  0  2   66   63   109 0.518   5.51
 2.01 Init -  52844  52675  170  2  2   60   -1   107 0.257  -1.95
 2.00 Prom -  53534  53495   40                              -9.25

 3.00 Prom +  55391  55430   40                             -10.45
 3.01 Init +  56530  56870  341  0  2   79   76   319 0.740  26.58
 3.02 Intr +  62104  62132   29  1  2  104  116    21 0.581   3.34
 3.03 Intr +  87078  87287  210  1  0   30   47   120 0.041   0.06
 3.04 Intr +  87546  87582   37  1  1   95   66    42 0.101  -0.90
 3.05 Intr +  88198  88344  147  1  0   50   10   134 0.490   0.23
 3.06 Intr +  88852  88986  135  1  0   60   81   147 0.997   9.96
 3.07 Intr +  89526  89576   51  0  0   80   78    58 0.424   1.10
 3.08 Intr +  90010  90088   79  1  1   56   82   120 0.999   6.83
 3.09 Intr +  91477  91591  115  0  1   91   80    96 0.972   8.20
 3.10 Intr +  93964  94063  100  2  1   30   79   115 0.969   3.05
 3.11 Term +  94444  94954  511  1  1  121   40   541 0.999  45.46
 3.12 PlyA +  96987  96992    6                               1.05

 4.00 Prom +  98770  98809   40                              -7.95
 4.01 Init + 100001 100114  114  1  0   56   92   129 0.901  10.36
 4.02 Term + 101282 101770  489  1  0   59   43   419 0.508  28.17
 4.03 PlyA + 102955 102960    6                               1.05

 5.09 PlyA - 103002 102997    6                               1.05
 5.08 Term - 104286 104137  150  0  0   88   47    74 0.021   0.23
 5.07 Intr - 116200 116120   81  1  0   92   80    83 0.091   6.82
 5.06 Intr - 123931 123614  318  1  0   49   47   167 0.018   3.93
 5.05 Intr - 129528 129439   90  0  0   64   78    51 0.028   0.97
 5.04 Intr - 131889 131788  102  0  0   65  100    69 0.386   5.25
 5.03 Intr - 140804 140729   76  1  1   71   58    87 0.029   2.60
 5.02 Intr - 141976 141829  148  2  1   88   24    65 0.546  -1.53
 5.01 Init - 153092 152978  115  2  1   44   53   188 0.979  11.32
 5.00 Prom - 155867 155828   40                              -7.35

 6.03 PlyA - 156430 156425    6                               1.05
 6.02 Term - 158037 157813  225  0  0   87   44   109 0.225   2.20
 6.01 Init - 163484 163404   81  2  0   88   37   100 0.325   5.92
 6.00 Prom - 168979 168940   40                              -3.05

 7.07 PlyA - 169269 169264    6                               1.05
 7.06 Term - 177058 176233  826  0  1   -5   47   384 0.209  16.55
 7.05 Intr - 187416 187174  243  2  0   52   52   206 0.385   9.09
 7.04 Intr - 188009 187838  172  0  1   65   84   154 0.968  10.78
 7.03 Intr - 189229 189026  204  2  0   16  115   112 0.792   4.95
 7.02 Intr - 190134 190008  127  0  1   50  106    77 0.807   5.03
 7.01 Intr - 192671 192564  108  2  0   73  111    81 0.922   8.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +   8339   8481  143  1  2   73   98   118 0.900  10.95
S.002 Intr +   8846   9319  474  2  0   -1   36   287 0.801   5.85
S.003 Init -  34499  34414   86  2  2   72   13    57 0.865  -3.06
S.004 Init +  82043  82101   59  1  2   52   92    70 0.887   4.63
S.005 Sngl + 184320 184649  330  2  0   60   44   179 0.940   6.47


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:58522753_58724519|GENSCAN_predicted_peptide_1|150_aa
XREDGWLSTGCQEVYAIVRNPWSMNLNTVRRLLPTENQFRHYTLTISKESEEAMDQLALQ
WEELIEARLTIGLVILLPENALRQLCQAESTHKVLRMELVPHGTDTTASDGLPTPMAERS
PAVMVMELTEWTSIQFKEGASRKTGEAVLG

>gi568815587f:58522753_58724519|GENSCAN_predicted_CDS_1|453_bp
ngaagggaagatggatggctctcaacagggtgccaggaagtttatgcaattgtccgtaat
ccatggtctatgaacctaaacacagttaggagacttctccccacggaaaatcaatttagg
cactatacgctgactatatctaaggaatctgaagaggctatggatcagttggcattacag
tgggaagagcttattgaagcaaggttgacaataggtcttgtcattctgctccctgaaaat
gcccttcgacaactgtgtcaggcagaaagcacacacaaagtgctcaggatggaacttgta
ccccatggcactgatacaacggccagtgatgggctgcccacacccatggcagagcgttcc
ccggcggtgatggtaatggagctcacagaatggacgtccatccagttcaaagaaggagcc
agtagaaaaactggtgaagcagtcctggggtag

>gi568815587f:58522753_58724519|GENSCAN_predicted_peptide_2|463_aa
MIVLGNYGFTVCSGKIDGEFGANRGINSWQILLDWIVTAVVVLLWAFCPLEVTGDQGLLM
ATLQQFLQIVISPVTTLETWCGSFFLLAEKWHRGQVGSNALLEELERSTLQDSDEYSNPA
PLPLDQHSRKETNLDETSEILSIQDNTSPLPAQLVYTTNIQELNVYSEAQEPKESPPPSK
TSAAAQLDELMAHLTEMQAKVAVRADAGKKHLPDKQDHKASLDSMLGGLEQELQDLGIAT
VPKGHCASCQKPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQL
FSPRCAYCAAPILDKVLTAMNQTWHPEHFFCSHCGEVFGAEGVKLQTFAVSVTAHKGSAD
PKSEQQQDLLQRVKEQNFYSVEGDPTAVSVANPLTAWGWRCWPATLSAGPADPVLPETRA
GPRAPHAAPVPARASPSTPPRRQRELAPASASPEWGSHSAAAG

>gi568815587f:58522753_58724519|GENSCAN_predicted_CDS_2|1392_bp
atgattgttttggggaactatgggttcactgtttgcagtggcaaaatagatggagagttt
ggtgctaaccgcggaataaactcttggcaaatacttttggactggattgttactgcagtt
gttgtcttgttatgggcgttttgccctttggaggtcactggagatcaagggctgttgatg
gctacacttcaacagtttcttcaaattgtcatcagcccagtaactacccttgagacttgg
tgtggatctttcttcctgctggcagagaaatggcatcgaggacaggttggctcaaatgcc
ttattggaggaactggaacgctccacccttcaggacagtgatgaatattccaacccagct
cctcttcccctggatcagcattccagaaaggagactaaccttgatgagacttcggagatc
ctttctattcaggataacacaagtcccttgccggcgcagctcgtgtatactaccaatatc
caggagctcaatgtctacagtgaagcccaagagccaaaggaatcaccaccaccttctaaa
acgtcagcagctgctcagttggatgagctcatggctcacctgactgagatgcaggccaag
gttgcagtgagagcagatgctggcaagaagcacttaccagacaagcaggatcacaaggcc
tccctggactcaatgcttgggggtctggagcaggaattgcaggaccttggcattgccaca
gtgcccaagggccattgtgcatcctgccagaaaccgattgctgggaaggtgatccatgct
ctagggcaatcatggcatcctgagcattttgtctgtactcattgcaaagaagagattggc
tccagtcccttctttgagcggagtggcttggcctactgccccaacgactaccaccaactt
ttttctccacgctgtgcttactgcgctgctcccatcctggataaagtgctgacagcaatg
aaccagacctggcacccagagcacttcttctgctctcactgcggagaggtgtttggtgca
gaaggagtgaagctgcagaccttcgcggtgagtgttacagctcataaaggcagtgcggac
ccaaagagtgagcagcagcaagatttattgcaaagagtgaaagaacaaaacttctacagt
gtggaaggggacccaactgctgtctcagttgctaatcctctcactgcctggggctggcgg
tgctggccggccactctgagtgcggggcctgctgatcccgtgctacccgaaactcgtgct
ggcccacgagcaccgcatgcagccccagttcctgcccgtgcctctccgtccacacctccc
cgcaggcagagggagctggctccagcctcagccagcccagagtggggctcccacagtgca
gcggcaggctga

>gi568815587f:58522753_58724519|GENSCAN_predicted_peptide_3|584_aa
MPGETEEPRPPEQQDQEGGEAAKAAPEEPQQRPPEAVAAAPAGTTSSRVLRGGRDRGRAA
AAAAAAAVSRRRKAEYPRRRRSSPSARPPDVPGQQPQAAKSPSPVQGKKSPRLLCIEKVT
TDKDPKEEKEEEDDSALPQEVSIAASRPSRGWRSSRTSVSRHRDTENTRSSRSKTGSLQL
ICKSEPNTDQLDYDVGEEHQSPGGISSEEEEEEEEEMLISEEEIPFKDDPRDETYKPHLE
RHVSDFTADMLMKYKETPKPRRKSGKVKEEKEKKEIKVEVEVEVKEEENEIREDEEPPRK
RGRRRKDDKSPRLPKRRKKPPIQYVRCEMEGCGTVLAHPRYLQHHIKYQHLLKKKYVCPH
PSCGRLFRLQKQLLRHAKHHTDQRDYICEYCARAFKSSHNLAVHRMIHTGEKPLQCEICG
FTCRQKASLNWHMKKHDADSFYQFSCNICGKKFEKKDSVVAHKAKSHPEVLIAEALAANA
GALITSTDILGTNPESLTQPSDGQGLPLLPEPLGNSTSGECLLLEAEGMSKSYCSGTERV
SLMADGKIFVGSGSSGGTEGLVMNSDILGATTEVLIEDSDSAGP

>gi568815587f:58522753_58724519|GENSCAN_predicted_CDS_3|1755_bp
atgccgggggagacggaagagccgagacccccggagcagcaggaccaggaagggggagag
gcggccaaggcggctccggaggagccccaacaacggccccctgaggcggtcgcggcggcg
cctgcagggaccactagcagccgcgtgctgaggggaggtcgggaccgaggccgggccgct
gcggccgccgccgccgcagctgtgtcccgccggaggaaggccgagtatccccgccggcgg
aggagcagccccagcgccaggcctcccgacgtccccgggcagcagccccaggccgcgaag
tccccgtctccagttcagggcaagaagagtccgcgactcctatgcatagaaaaagtaaca
actgataaagatcccaaggaagaaaaagaggaagaagacgattctgccctccctcaggaa
gtttccattgctgcatctagacctagccggggctggcgtagtagtaggacatctgtttct
cgccatcgtgatacagagaacacccgaagctctcggtccaagaccggttcattgcagctc
atttgcaagtcagaaccaaatacagaccaacttgattatgatgttggagaagagcatcag
tctccaggtggcattagtagtgaagaggaagaggaggaggaagaagagatgttaatcagt
gaagaggagataccattcaaagatgatccaagagatgagacctacaaaccccacttagaa
aggcatgtctcagattttactgcagacatgttaatgaaatataaggaaaccccaaagcca
cggagaaaatcagggaaggtaaaagaagagaaggagaagaaggaaattaaagtggaagta
gaggtggaggtgaaagaagaggagaatgaaattagagaggatgaggaacctccaaggaag
agaggaagaagacgaaaagatgacaaaagtccacgtttacccaaaaggagaaaaaagcct
ccaatccagtatgtccgttgtgagatggaaggatgtggaactgtccttgcccatcctcgc
tatttgcagcaccacattaaataccagcatttgctgaagaagaaatatgtatgtccccat
ccctcctgtggacgactcttcaggcttcagaagcaacttctgcgacatgccaaacatcat
acagatcaaagggattatatctgtgaatattgtgctcgggccttcaagagttcccacaat
ctggcagtgcaccggatgattcacactggcgagaagccattacaatgtgagatctgtgga
tttacttgtcgacaaaaggcatctcttaattggcacatgaagaaacatgatgcagactcc
ttctaccagttttcttgcaatatctgtggcaaaaaatttgagaagaaggacagcgtagtg
gcacacaaggcaaaaagccaccctgaggtgctgattgcagaagctctggctgccaatgca
ggcgccctcatcaccagcacagatatcttgggcactaacccagagtccctgacgcagcct
tcagatggtcagggtcttcctcttcttcctgagcccttgggaaactcaacctctggagag
tgcctactgttagaagctgaagggatgtcaaagtcatactgcagtgggacggaacgggtg
agcctgatggctgatgggaagatctttgtgggaagcggcagcagtggaggcactgaaggg
ctggttatgaactcagatatactcggtgctaccacagaggttctgattgaagattcagac
tctgccggaccttag

>gi568815587f:58522753_58724519|GENSCAN_predicted_peptide_4|200_aa
MAFTEHSPLTPHRRDLCSRSIWLARKIRSDLTALTESYVKHQGLNKNINLDSADGMPVAS
TDQWSELTEAERLQENLQAYRTFHVLLARLLEDQQVHFTPTEGDFHQAIHTLLLQVAAFA
YQIEELMILLEYKIPRNEADGMPINVGDGGLFEKKLWGLKVLQELSQWTVRSIHDLRFIS
SHQTGIPARGSHYIANNKKM

>gi568815587f:58522753_58724519|GENSCAN_predicted_CDS_4|603_bp
atggctttcacagagcattcaccgctgacccctcaccgtcgggacctctgtagccgctct
atctggctagcaaggaagattcgttcagacctgactgctcttacggaatcctatgtgaag
catcagggcctgaacaagaacatcaacctggactctgcggatgggatgccagtggcaagc
actgatcagtggagtgagctgaccgaggcagagcgactccaagagaaccttcaagcttat
cgtaccttccatgttttgttggccaggctcttagaagaccagcaggtgcattttacccca
accgaaggtgacttccatcaagctatacatacccttcttctccaagtcgctgcctttgca
taccagatagaggagttaatgatactcctggaatacaagatcccccgcaatgaggctgat
gggatgcctattaatgttggagatggtggtctctttgagaagaagctgtggggcctaaag
gtgctgcaggagctttcacagtggacagtaaggtccatccatgaccttcgtttcatttct
tctcatcagactgggatcccagcacgtgggagccattatattgctaacaacaagaaaatg
tag

>gi568815587f:58522753_58724519|GENSCAN_predicted_peptide_5|359_aa
MALEKALDNVQDKVCLEIPGQSLALDFADSAPPAEGSRGKMMTLFPISLGVYTLPMVLFL
ISREDDDIIPNITGDVHPSCDILLNIQGEEEDDITHNIAGSVRPFCDLVPNTLKTTDDFD
HDTNTYLGKNPEDLQGPSTRSSIFRFKETGLCLNPRESLEMPKGKHISEDSQRQMGEEAP
SLVEGLQGITPLGQKNLKSILEPHSIPLTQSTKIRRNQKNNSGNMKKQSTLTPPKYNTST
PAMDPNQEEISELPEKEIRTLIIKLIKEAPEKEEISKQQSIQEHVRTLSNHLENHPDPGG
QVPGRDACAQWLVLVPFVDPLPLQIRLLYIHIPLHATHESLSQAPLSSETSADVCCCTC

>gi568815587f:58522753_58724519|GENSCAN_predicted_CDS_5|1080_bp
atggctttggagaaagcccttgacaacgttcaggacaaagtgtgcctggagatcccaggg
cagtcccttgctctggactttgcggactccgctccgccagcagagggcagcagagggaag
atgatgacattattcccaatatcactgggggtgtacaccctccccatggtattgttccta
atttccagggaagatgatgacattattcccaatatcactggggatgtacacccttcctgt
gatattcttcttaatatccagggagaagaagaagatgatattactcacaatatcgcaggg
agtgtacgccctttctgtgatttagttcctaatacgctgaagacgacagatgactttgat
cacgacaccaacacttacctgggtaagaacccagaggatttacagggcccatcaaccaga
agcagcattttcagattcaaggaaacaggtctctgcctcaacccaagagaatcattggaa
atgcctaaaggaaaacatatctcagaggacagccagagacaaatgggggaggaagcccca
tccctagtggaagggcttcaagggatcacccccttgggacaaaagaatctgaagagtatc
cttgagccccatagcattcctctgacacagtctaccaaaataagaaggaatcagaaaaac
aattctggtaatatgaaaaagcaaagtactttaacacccccaaaatataacactagcaca
ccagcaatggatccaaaccaagaagaaatctctgaattgccagaaaaagaaatcagaaca
ttgattattaagctaatcaaggaggcaccagagaaagaagaaatttctaagcagcaaagc
attcaagagcatgtgcggaccctcagcaaccacctggagaaccacccagacccaggaggc
caagtacctggcagagatgcttgtgctcagtggttagtacttgtgccttttgtggaccct
ctgccacttcaaatccgcctcttatacatacatattcctttacatgcaactcatgagagc
ttaagccaagctccactgagttctgaaacttctgcagatgtctgctgctgtacctgctga

>gi568815587f:58522753_58724519|GENSCAN_predicted_peptide_6|101_aa
MPREVREDSNKISDPIDLEAAHTQEMKSLEAAKAKTAKQQRWQPAPLSGGSVSGSYRALA
GPKTLVAQKSMVGRSCSVRRNGTRKLCKTVWLFFHRAAALC

>gi568815587f:58522753_58724519|GENSCAN_predicted_CDS_6|306_bp
atgcccagggaagtacgagaagactctaacaagatctccgatccaattgaccttgaggct
gcacacacacaggaaatgaagagcctggaggcagcaaaggcaaagactgcaaaacagcaa
agatggcagcctgcccctctctctgggggctctgtctcaggcagctatagagcccttgct
ggcccaaaaaccctggtggcccaaaagtccatggttgggaggtcctgctcagtaaggaga
aatgggaccaggaaactgtgtaaaacagtctggctgtttttccacagggcagctgcactg
tgctag

>gi568815587f:58522753_58724519|GENSCAN_predicted_peptide_7|559_aa
VYGTVFHINHGNPFNLKAVVDKWPDFNTVVVCPQEQDMTDDLDHYTNTYQIYSKDPQNCQ
EFLGSPELINWKQHLQIQTGDCGDSMMATCVASRLAQAYLNGIGLNIIGLNQEQKQRESP
NGAGTFKPLLALNLLFPLMKDGQCGQGSQPSLNEAIQNLAAIKSFKVKQTQRILYMAAET
AKELTPFLLKSKILSPNGGKPKAINQEMFKLSSMDVTHAHLVNKFWHFGGNERSQRFIER
CIQTFPTCCLLGPEGTPVCWDLMDQTGEMRMAGTLPEYRLHGLVTPNRHLQNSPPQISRI
YIFSTPHHTYSKIDHIIGSKARLSKCKRTEIITNYLSDHSAIKLELRIKKLTQNCSTTQK
LNNLLLNDYRVHNEMKAEIKMFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQER
SKIDTLTSQLKELEKQEQTHSKASRRQGITKIRAELKEIETQKTLQKINESRSWFFERFN
KIDRPLARLIKKQGEKNQRDAIKNDKGGITTNPTEIQTTIREYYKHLYANKLENLEEMDK
FLDTYTLPRLNQEEVDSLN

>gi568815587f:58522753_58724519|GENSCAN_predicted_CDS_7|1680_bp
gtttatggaactgtctttcacataaaccatggaaatccattcaatctgaaggctgtggtg
gacaagtggcctgattttaatacagtggttgtctgccctcaggagcaggatatgacagat
gaccttgatcactataccaatacttaccaaatctactccaaagatccccaaaactgtcag
gaattccttggatcaccagaactcatcaactggaaacagcatttacagattcaaactggt
gactgtggtgacagcatgatggcaacatgtgtcgctagcaggctggcccaggcctatctt
aatggtattggtcttaacataattggtcttaaccaggagcaaaaacaaagggaaagcccc
aatggggcaggcacttttaagcctctccttgcattaaatttgctctttccattgatgaaa
gatggtcaatgtggccaaggttcacagcctagcctgaatgaggctatacaaaatcttgca
gccattaagtccttcaaagtcaaacaaacacaacgcattctctatatggcagctgaaaca
gccaaggaactgactcctttcctgctgaaatcaaagattttatctcccaatggtggcaaa
cccaaggccatcaaccaagagatgtttaaactctcatccatggatgttacccatgctcac
ttggtgaataaattctggcattttggtggtaatgagaggagccagagattcattgagcgc
tgcattcagacctttcccacctgctgtctcctggggcctgaggggacccctgtgtgctgg
gatctaatggaccagactggagagatgagaatggcaggcaccttgccggaataccggctc
catggccttgtgacacctaatagacatctacagaactctccacctcagatcagcagaata
tacattttttcaacaccacaccacacctattccaaaattgaccacataattggaagtaaa
gctcgcctcagcaaatgtaaaagaacagaaattataacaaactatctctcagaccacagt
gcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacacagaaa
ctgaacaacctgctcctgaatgactaccgggtacataacgaaatgaaggcagaaataaag
atgttctttgaaaccaatgagaacaaagacacaacataccagaatctctgggacacattc
aaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaaga
tccaaaattgacaccctaacatcacaattaaaagaactagaaaagcaagagcaaacacat
tcaaaagctagcagaaggcaaggaataactaaaatcagagcagaactgaaggagatagag
acacaaaaaactcttcaaaaaattaatgaatccaggagctggttttttgaaaggttcaac
aaaattgatagaccgctagcaagactaataaagaaacaaggagagaagaatcaaagagac
gcaataaaaaatgataaagggggtatcaccaccaatcccacagaaatacaaactaccatc
agagaatactacaaacacctctacgcaaataaactagaaaatctagaagaaatggataaa
ttcctcgacacgtacaccctcccaagactaaaccaggaagaagttgattctctgaattga