GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:42:45

Sequence gi568815587f:45705802_45911332 : 205531 bp : 48.59% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4364   4474  111  2  0   24   87    76 0.164   0.59
 1.02 Intr +  10032  10126   95  0  2   92   68    68 0.868   4.81
 1.03 Intr +  16263  16406  144  1  0   68   53   101 0.252   4.85
 1.04 Intr +  21404  21426   23  0  2   75  121    -1 0.143  -0.84
 1.05 Intr +  23475  23562   88  2  1   76   81   128 0.631  10.44
 1.06 Intr +  35921  36061  141  0  0   31   76   101 0.168   3.52
 1.07 Intr +  45151  45314  164  2  2   69   76    61 0.201   2.69
 1.08 Term +  46291  46446  156  0  0   34   49    87 0.324  -2.67
 1.09 PlyA +  52390  52395    6                               1.05

 2.00 Prom +  55023  55062   40                              -4.36
 2.01 Init +  65784  65913  130  2  1   74  106    85 0.940   9.21
 2.02 Intr +  66192  66220   29  1  2  103   58     8 0.432  -2.87
 2.03 Intr +  68231  68297   67  1  1  103   76    64 0.635   5.18
 2.04 Intr +  83873  84050  178  0  1   54   63    64 0.011  -0.52
 2.05 Intr + 100009 100535  527  1  2   49  109   959 0.687  86.69
 2.06 Term + 104975 105534  560  0  2  121   53  1000 0.931  94.31
 2.07 PlyA + 107198 107203    6                               1.05

 3.00 Prom + 125102 125141   40                              -2.76
 3.01 Init + 141627 141904  278  2  2   63   78   459 0.851  36.86
 3.02 Intr + 150181 150289  109  1  1   61  121    45 0.969   5.39
 3.03 Intr + 152930 153072  143  1  2   67  110   221 0.998  21.35
 3.04 Intr + 153957 154067  111  0  0   53   42   148 0.929   6.19
 3.05 Intr + 155047 155231  185  1  2   69   65   373 0.989  32.53
 3.06 Intr + 156259 156347   89  2  2  119   86    24 0.914   4.99
 3.07 Intr + 161811 161951  141  2  0   98  116   141 0.999  18.45
 3.08 Intr + 163705 164016  312  0  0   86  100   240 0.969  21.38
 3.09 Intr + 164252 164403  152  1  2   80   94   246 0.999  23.36
 3.10 Intr + 164457 164731  275  0  2   93   56   353 0.789  29.78
 3.11 Intr + 165041 165133   93  0  0  138   99    12 0.993   7.24
 3.12 Term + 166291 166430  140  2  2  101   54   174 0.990  13.43
 3.13 PlyA + 168835 168840    6                               1.05

 4.00 Prom + 174439 174478   40                              -5.26
 4.01 Init + 180020 180120  101  1  2   80   94   131 0.334  10.64
 4.02 Intr + 185971 186059   89  1  2   53   37    84 0.160  -0.59
 4.03 Intr + 191071 191149   79  2  1   65   58   122 0.422   5.51
 4.04 Intr + 192284 192389  106  2  1   99   90   174 0.980  18.92
 4.05 Intr + 194337 194651  315  2  0  106   94   423 0.898  40.96
 4.06 Intr + 195000 195098   99  2  0   69   59   138 0.995   9.31
 4.07 Intr + 196029 196260  232  2  1   83  111    92 0.966   8.35
 4.08 Intr + 196571 197383  813  0  0   94   81  1066 0.964  97.91
 4.09 Intr + 197564 197639   76  0  1   79   94   114 0.922   9.67
 4.10 Intr + 198188 198360  173  2  2   58   72   356 0.992  30.59
 4.11 Intr + 198654 198763  110  1  2   91   77   127 0.994  11.90
 4.12 Intr + 198917 199033  117  1  0   88   57   136 0.996  11.16
 4.13 Intr + 199170 199240   71  2  2  112  108    -1 0.994   2.28
 4.14 Intr + 199350 199448   99  0  0   59   71   171 0.670  11.73
 4.15 Term + 199848 199920   73  0  1   90   37   153 0.940   7.78
 4.16 PlyA + 200640 200645    6                              -1.95

 5.05 PlyA - 200756 200751    6                              -3.94
 5.04 Term - 200889 200768  122  1  2  126   46    73 0.973   5.54
 5.03 Intr - 201141 201008  134  2  2  104   34    46 0.810   1.09
 5.02 Intr - 204257 204101  157  0  1   66   81    35 0.108  -0.33
 5.01 Intr - 205161 205097   65  2  2  103   82    95 0.945   8.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 132909 133160  252  2  0   52   47   157 0.897   3.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:45705802_45911332|GENSCAN_predicted_peptide_1|307_aa
XHFGCVNQKDKATSHQGPGKRRWTEEMRIKGAEKKRGRHALLFSPNAGSPEKVELTLGIQ
KHFTNPLASEPQTHSFFGNFFTPFTEKTLDFECEKWLNLLRKRIKPLPQDLAKRELTECP
YCLFKCPTSITANENRKSHVKGYTSPSITKRALKAANLMQTQLEKEEDSQVIPAKATLDQ
PASCQAASDHRVQLTTASPGPAVRFQVSPESSTSSFDLATEYSIVLINMPVSPSYPHILG
ILKRTVMDTKLFSVGPKYLNLKVIFAALFTAVDNGKQPKCPVMEASYINFGTCIHVENAK
AYGRKNT

>gi568815587f:45705802_45911332|GENSCAN_predicted_CDS_1|924_bp
nnccattttggatgtgttaaccagaaggacaaagccacaagccatcagggaccagggaag
aggagatggacagaggaaatgcgtatcaagggtgcagagaagaagaggggaagacatgct
ctcctcttctcccccaatgcaggctctccagagaaagtggaactgacattagggattcag
aagcattttaccaaccccttagcctcagagccccaaacgcattccttctttggaaatttc
tttacaccctttactgagaagaccctggattttgagtgtgaaaaatggctgaatctactt
cggaaaagaataaaaccgttaccccaggatctcgcaaagcgagaattgactgaatgtccc
tactgcctattcaagtgtccaactagtatcaccgccaatgaaaaccggaagtcccatgtc
aaaggatataccagccccagcatcacaaagagagcattaaaagcagcaaacttgatgcaa
acacaacttgaaaaagaagaggacagccaagtcatcccagccaaggccaccctggaccag
ccagcctcttgccaagctgccagtgaccacagagtccaattaacaacagccagtcctggc
ccagcagtacgtttccaggtgtcaccagaatcctcaacgtcttcctttgatttggccaca
gaatattccattgtgttaataaacatgccggtttcaccttcttatccccatattctgggc
attctgaagaggactgtgatggacaccaagttgttctcagtagggcctaaatatttgaat
ctgaaggtgatctttgcagcattatttacagcagtagataatggaaaacaacctaaatgt
cccgtaatggaggccagttacatcaattttggtacatgcatacacgttgaaaatgcaaag
gcgtacgggcggaagaacacataa

>gi568815587f:45705802_45911332|GENSCAN_predicted_peptide_2|496_aa
MGSGAETVTVTVLFREEGRRNQCRGRLWGVDRRCPQLTGSMTLEEWKLRQSRDLEKRLDE
AYIYWYPGMYKGQCPVHQLVTGKHTVVHDKRNQRLIHATTWMNLKSTMLSERSQTQKAIY
YMIPFVRHYGKAKTRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLY
WVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLR
LDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSF
YALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIW
RLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQI
KFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKT
PEEPSPKDSEKSAMGV

>gi568815587f:45705802_45911332|GENSCAN_predicted_CDS_2|1491_bp
atggggagtggggcagaaactgtcactgtcacggtcctgtttagagaggaaggtcggaga
aaccagtgccgtggaaggctctggggcgttgacaggcgctgtccccagctcaccggctct
atgaccctggaagaatggaaacttcgtcagagcagggacttagaaaagcgactggatgag
gcgtacatttactggtaccctgggatgtataagggccagtgtccggtccatcaactggtg
actggaaaacatactgtggtacatgataaaaggaaccaacgactgatacatgcaacaaca
tggatgaaccttaaaagcaccatgttaagtgaaagaagtcagacacaaaaggctatatac
tatatgattccatttgtaagacattatggaaaagccaaaactagggcccctctgaagcgg
tccaggatcctgcacatggcgctgaccggggcctcagacccctctgcagaggcagaggcc
aacggggagaagccctttctgctgcgggcattgcagatcgcgctggtggtctccctctac
tgggtcacctccatctccatggtgttccttaataagtacctgctggacagcccctccctg
cggctggacacccccatcttcgtcaccttctaccagtgcctggtgaccacgctgctgtgc
aaaggcctcagcgctctggccgcctgctgccctggtgccgtggacttccccagcttgcgc
ctggacctcagggtggcccgcagcgtcctgcccctgtcggtggtcttcatcggcatgatc
accttcaataacctctgcctcaagtacgtcggtgtggccttctacaatgtgggccgctca
ctcaccaccgtcttcaacgtgctgctctcctacctgctgctcaagcagaccacctccttc
tatgccctgctcacctgcggtatcatcatcgggggcttctggcttggtgtggaccaggag
ggggcagaaggcaccctgtcgtggctgggcaccgtcttcggcgtgctggctagcctctgt
gtctcgctcaacgccatctacaccacgaaggtgctcccggcggtggacggcagcatctgg
cgcctgactttctacaacaacgtcaacgcctgcatcctcttcctgcccctgctcctgctg
ctcggggagcttcaggccctgcgtgactttgcccagctgggcagtgcccacttctggggg
atgatgacgctgggcggcctgtttggctttgccatcggctacgtgacaggactgcagatc
aagttcaccagtccgctgacccacaatgtgtcgggcacggccaaggcctgtgcccagaca
gtgctggccgtgctctactacgaggagaccaagagcttcctctggtggacgagcaacatg
atggtgctgggcggctcctccgcctacacctgggtcaggggctgggagatgaagaagact
ccggaggagcccagccccaaagacagcgagaagagcgccatgggggtgtga

>gi568815587f:45705802_45911332|GENSCAN_predicted_peptide_3|675_aa
MGGVHVAYRGGAGVAGAVWTVMAATVATAAAVAPAPAPGTDSASSVHWFRKGLRLHDNPA
LLAAVRGARCVRCVYILDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSRLFVVRGQP
ADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRAVT
LLLLLLLLLLLPSQQPPPLPTPTSQPSAGCQEARIIELNGQKPPLTYKRFQAIISRMELP
KKPVGLVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAVWQGGETEALARLDK
HLERKAWVANYERPRMNANSLLASPTGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPP
LSLFGQLLWREFFYTAATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAI
MTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCS
AFFQQFFHCYCPVGFGRRTDPSGDYIRMGYPGPFEGGSGYADGSSGVSYFRRYLPKLKAF
PSRYIYEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYRGLCL
LASVPSCVEDLSHPVAEPSSSQAGSMSSAGPRPLPSGPASPKRKLEAAEEPPGEELSKRA
RVAELPTPELPSKDA

>gi568815587f:45705802_45911332|GENSCAN_predicted_CDS_3|2028_bp
atgggcggggtccacgtcgcctaccggggcggagcgggggtggctggagcagtctggaca
gtcatggcggcgactgtggcgacggcggcagctgtggccccggcgccagcgcccggcacg
gacagcgcctcttcggtgcactggttccgcaaagggctgcgactccacgacaacccggcg
ttgctggcggccgtgcgcggggcgcgctgcgtgcgctgcgtttacattctcgacccgtgg
ttcgcggcctcctcctcagtcgggatcaaccgatggaggttcctacttcagtctctggaa
gatttggacacaagtttaaggaaactgaactcccgcctgtttgtagtccggggacagcca
gccgacgtgttcccaaggctgttcaaggaatggggagtgacccgcttgacctttgaatat
gactctgaaccctttgggaaagaacgggatgcagccatcatgaagatggccaaggaggct
ggtgtggaagtagtgacggagaattctcataccctctatgacctggacagagctgtcacc
ctcctgctgctgctgctgctgttgctgctgctgccaagccagcagccgccgccgctcccc
acccccacttcccaacccagtgctggctgccaagaagccaggatcattgagctgaatggg
cagaagccaccccttacatacaagcgctttcaggccatcatcagccgcatggagctgccc
aagaagccagtgggcttggtgaccagccagcagatggagagctgcagggccgagatccag
gagaaccacgacgagacctacggcgtgccctccctggaggagctggggttccccactgaa
ggacttggtccagctgtctggcagggaggagagacagaagctctggcccgcctggataag
cacttggaacggaaggcctgggttgccaactatgagagaccccgaatgaacgccaactcc
ctcctggccagccccacaggcctcagcccctacctgcgctttggttgtctctcctgccgc
ctcttctactaccgcctgtgggacctgtataaaaaggtgaagcggaacagcacacctccc
ctctccctatttgggcaactcctatggcgagagttcttctacacggcagctaccaacaac
cccaggtttgaccgcatggaggggaaccccatctgcatccagatcccctgggaccgcaat
cctgaggccctggccaagtgggctgagggcaagacaggcttcccttggattgatgccatc
atgacccaactgaggcaggagggctggatccaccacctggcccggcatgccgtggcctgc
ttcctgacccgcggggacctctgggtcagctgggagagcggggtccgggtatttgatgag
ctgctcctggatgcagatttcagcgtgaacgcaggcagctggatgtggctgtcctgcagt
gctttcttccagcagttcttccactgctactgccctgtgggctttggccgtcgcacggac
cccagtggggactacatcaggatgggataccctgggccttttgaaggagggtctgggtat
gctgatgggtcatctggtgtatcttatttcaggcgatacctgcccaaattgaaagcgttc
ccctctcgatacatctatgagccctggaatgccccagagtcaattcagaaggcagccaag
tgcatcattggtgtggactacccacggcccatcgtcaaccatgccgagaccagccggctt
aacattgaacgaatgaagcagatttaccagcagctttcgcgctaccggggactctgtcta
ctggcatctgtcccttcctgtgtggaagacctcagtcaccctgtggcagagcccagctcg
agccaggctggcagcatgagcagtgcaggcccaagaccactacccagtggcccagcatcc
cccaaacgcaagctggaagcagccgaggaaccacctggtgaagaactcagcaaacgggcc
cgggtggcagagttgccaaccccagagctgccgagcaaggatgcctga

>gi568815587f:45705802_45911332|GENSCAN_predicted_peptide_4|850_aa
MAERESGGLGGGAASPPAASPFLGLHIASPPNFRLYNVDSKRLHHISSADGHDGTSPLVL
GDAGLSMQLVLKMDSSPDNDSWLEDQWERWLTHDISLEEFEDEDLSEITDECGISLQCKD
TLSLRPPRAGLLSAGGGGAGSRLQAEMLQMDLIDATGDTPGAEDDEEDDDEERAARRPGA
GPPKAESGQEPASRGQGQSQGQSQGPGSGDTYRPKRPTTLNLFPQVPRSQDMGLLVKVEQ
EQGLEKRASEMVIVGEAVGDRGERRVTSEAFDSGGGVDTANGPRDGLRGQGRGLPVPGTV
DHFHHKSLLFPAQDTLNNNSLGKKHSWQDRVSRSSSPLKTGEQTPPHEHICLSDELPPQS
GPAPTTDRGTSTDSPCRRSTATQMAPPGGPPAAPPGGRGHSHRDRIHYQADVRLEATEEI
YLTPVQRPPDAAEPTSAFLPPTESRMSVSSDPDPAAYPSTAGRPHPSISEEEEGFDCLSS
PERAEPPGGGWRGSLGEPPPPPRASLSSDTSALSYDSVKYTLVVDEHAQLELVSLRPCFG
DYSDESDSATVYDNCASVSSPYESAIGEEYEEAPRPQPPACLSEDSTPDEPDVHFSKKFL
NVFMSGRSRSSSAESFGLFSCIINGEEQEQTHRAIFRFVPRHEDELELEVDDPLLVELQA
EDYWYEAYNMRTGARGVFPAYYAIEVTKEPEHMAALAKNSDWVDQFRVKFLGSVQVPYHK
GNDVLCAAMQKIATTRRLTVHFNPPSSCVLEISVRGVKIGVKADDSQEAKGNKCSHFFQL
KNISFCGYHPKNNKYFGFITKHPADHRFACHVFVSEDSTKALAESVGRAFQQFYKQFVEY
TCPTEDIYLE

>gi568815587f:45705802_45911332|GENSCAN_predicted_CDS_4|2553_bp
atggcggagcgagaaagcggcggcctgggagggggggccgcgtccccgcccgccgcctcc
ccgttcctggggctgcacatcgcttcgcctcccaatttcagactttataatgttgattcc
aaaagactgcatcacatttcatctgctgatggccacgatggaaccagccccctggtgctg
ggtgacgcagggctctccatgcagctggtgctgaagatggattcgagcccagacaatgac
agctggttggaggatcaatgggagcgctggctcacccatgacatcagcctggaggagttt
gaggatgaagacctctcggagatcactgatgagtgtggcatcagcttacagtgcaaagac
accctgtccttacggcccccgcgcgccgggctgctctctgcgggcggcggcggcgcgggg
agccggttgcaggccgagatgctgcagatggacctgatcgacgcgacgggggacactccc
ggggccgaggacgacgaggaggacgacgacgaggagcgcgcggcccggcggccgggagcg
gggccgcccaaggccgagtccggccaggagccggcgtcccgcggccagggccagagccaa
ggccagagccagggcccgggcagcggggacacgtaccggcccaagcggcccaccacgctc
aacctctttccgcaggtgccgcggtctcaggatatggggctcctggtgaaagtggagcag
gagcagggcctggagaaaagggcatctgaaatggtcatcgtgggggaggccgtgggagat
cgtggcgagaggagagttacgagtgaggcctttgacagtggaggcggggtggacacagca
aatggccctagggatggcctgagggggcagggccggggcctccctgtgccgggcactgtt
gaccacttccatcacaagagccttttgttccctgcacaggacacactgaataataattct
ctgggcaaaaagcacagttggcaggatcgggtgtctcgatcatcctcacccctgaagaca
ggggagcagacaccaccgcatgaacacatctgcctgagcgatgagctgcccccccagagc
ggccccgcccccaccacagatcgaggcacctccaccgacagcccttgccgccgcagcaca
gccacccagatggcacctccgggtggtccccctgctgccccgcctgggggtcggggccac
tcgcatcgagaccgaatccactaccaggccgatgtgcgactagaggccactgaggagatc
tacctgaccccagtgcagaggcccccagacgctgcagagcccacctccgccttcctgccg
cccactgagagccggatgtcagtcagctccgatccagaccctgccgcctacccctccacg
gcagggcggccgcacccctccatcagtgaagaggaagagggcttcgactgcctgtcgtcc
ccagagcgggctgagcccccaggcggagggtggcgggggagcctgggggagccgccgcca
cctccacgggcctctctgagctcggacaccagcgccctgtcctatgactctgtcaagtac
acgctggtggtagatgagcatgcacagctggagctggtgagcctgcggccgtgcttcgga
gactacagtgacgagagtgactctgccaccgtctatgacaactgtgcctccgtctcctcg
ccctatgagtcggccatcggagaggaatatgaggaggccccgcggccccagccccctgcc
tgcctctccgaggactccacgcctgatgaacccgacgtccatttctccaagaaattcctg
aacgtcttcatgagtggccgctcccgctcctccagtgctgagtccttcgggctgttctcc
tgcatcatcaacggggaggagcaggagcagacccaccgggccatattcaggtttgtgcct
cgacacgaagacgaacttgagctggaagtggatgaccctctgctagtggagctccaggct
gaagactactggtacgaggcctacaacatgcgcactggtgcccggggtgtctttcctgcc
tattacgccatcgaggtcaccaaggagcccgagcacatggcagccctggccaaaaacagt
gactgggtggaccagttccgggtgaagttcctgggctcagtccaggttccctatcacaag
ggcaatgacgtcctctgtgctgctatgcaaaagattgccaccacccgccggctcaccgtg
cactttaacccgccctccagctgtgtcctggagatcagcgtgcggggtgtgaagataggc
gtcaaggccgatgactcccaggaggccaaggggaataaatgtagccactttttccagtta
aaaaacatctctttctgcggatatcatccaaagaacaacaagtactttgggttcatcacc
aagcaccccgccgaccaccggtttgcctgccacgtctttgtgtctgaagactccaccaaa
gccctggcagagtccgtggggagagcattccagcagttctacaagcagtttgtggagtac
acctgccccacagaagatatctacctggagtag

>gi568815587f:45705802_45911332|GENSCAN_predicted_peptide_5|159_aa
XARILFLLQLLADHVPGVGLVTTRTLSLLGQEAFTRSGIQAPLPQKAVTSPHGAREAARL
GSHRSEHCCSLAGPWSQRSVPEAFSAPLELSQPLSGLVDGSISLVPFPYPSLTVETPLRD
YGILPKHPRPRGPRPLLSRAQQRKRDGPDLAEYYYDAHL

>gi568815587f:45705802_45911332|GENSCAN_predicted_CDS_5|480_bp
nnggccaggatcctcttcctgctccagttgctggccgaccacgtccctggcgttggcctg
gtcacaacccgcaccttgtcactgctgggccaagaagccttcactaggagtgggatccag
gctcctctcccacagaaagcggtgacttcacctcatggagcccgggaagctgctcgcctc
ggcagccataggagcgaacactgctgctctctcgctggcccctggtctcagcggtctgtt
cctgaggcattttccgcccccctggaactctcgcagccactttccggcctggtggatggt
agtatctctcttgtccccttcccctacccatccctgacagtggagacgcccctaagagac
tatggcatcctccccaagcacccaaggccgcgagggcctcgacccctcctgtctagggcc
cagcagcgcaagcgggacgggcccgaccttgccgagtattactatgatgcacacctatga