GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:15:09

Sequence gi568815587f:27481698_27682051 : 200354 bp : 39.55% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    649    644    6                               1.05
 1.07 Term -  17107  16952  156  1  0   76   37   201 0.998  10.75
 1.06 Intr -  17871  17662  210  0  0   74   79   162 0.999  12.09
 1.05 Intr -  19869  19798   72  0  0   66   94    77 0.957   4.78
 1.04 Intr -  20223  20105  119  1  2   57  105    90 0.845   6.86
 1.03 Intr -  24758  24531  228  0  0   68   20   121 0.271   0.22
 1.02 Intr -  25068  25019   50  2  2   78  105   106 0.332   8.71
 1.01 Init -  40679  40588   92  2  2   66   13   148 0.234   5.11
 1.00 Prom -  42148  42109   40                              -4.65

 2.04 PlyA -  45348  45343    6                               1.05
 2.03 Term -  64497  64390  108  0  0   57   44   106 0.388   0.63
 2.02 Intr -  67199  67039  161  0  2   56   78    71 0.161   1.69
 2.01 Init -  71061  70842  220  0  1   71  103   126 0.243  11.24
 2.00 Prom -  85909  85870   40                              -5.45

 3.00 Prom +  97491  97530   40                              -5.75
 3.01 Sngl +  99983 100357  375  1  0   61   42   510 0.702  39.59
 3.02 PlyA + 100387 100392    6                               1.05

 4.00 Prom + 118215 118254   40                              -5.35
 4.01 Init + 120226 120328  103  0  1  105   54    92 0.621   7.95
 4.02 Term + 123579 123658   80  1  2  105   54    20 0.285  -2.75
 4.03 PlyA + 123940 123945    6                               1.05

 5.00 Prom + 140147 140186   40                              -5.95
 5.01 Sngl + 142487 142798  312  1  0   56   48   286 0.807  17.08
 5.02 PlyA + 142915 142920    6                              -0.45

 6.00 Prom + 142927 142966   40                              -6.75
 6.01 Init + 149731 149770   40  0  1   68   59    55 0.514   1.01
 6.02 Intr + 150554 150735  182  0  2  -40  109   234 0.560  11.37
 6.03 Term + 155830 156093  264  0  0   47   47   174 0.529   3.72
 6.04 PlyA + 157550 157555    6                               1.05

 7.00 Prom + 160894 160933   40                               0.35
 7.01 Init + 164146 164214   69  0  0   72  105    56 0.884   6.80
 7.02 Term + 164327 164443  117  1  0  111   40    92 0.888   4.26
 7.03 PlyA + 168116 168121    6                               1.05

 8.04 PlyA - 170695 170690    6                               1.05
 8.03 Term - 176888 176124  765  2  0   90   40   610 0.359  48.82
 8.02 Intr - 184513 184316  198  1  0   61   36   153 0.000   6.03
 8.01 Intr - 192527 192363  165  2  0   21  113   117 0.038   6.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_1|308_aa
MDSSSEDRMDEGTQAKMQAGLEEVMGTTCGRLREKMAALGEPVRLERDTRRTRAPLVSTA
EAAFGDPYTRKANVTHPVRTDYTHCLYSTRTDTRYNSTEPPFPAVCTQTPSLLSPQPRLY
SGWDICRAIELLEKLQRSGEVPPQKLQALQRVLQSEFCNAVREVYEHVYETVDISSSPEV
RANATAKATVAAFAASEGHSHPRVVELPKTEEGLGFNIMGGKEQNSPIYISRIIPGGIAD
RHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAQGKVKLVVRYTPKVLEEMESRFEKMR
SAKRRQQT

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_1|927_bp
atggacagttcctcagaggacagaatggatgaggggacacaggcgaagatgcaagcaggt
ttggaagaagtgatgggaaccacatgtggaaggttaagggagaagatggcggcgctaggg
gaacccgtgcggctggagagagacacacgccgcacacgcgctcccttggtgagcacagca
gaagcagcattcggagacccgtacacccgaaaagcaaacgtcacacacccggttcgcaca
gactacactcattgcctgtacagcacgagaacggacacacggtacaattcaacagaacct
cctttccccgctgtttgcacacaaactccttcattactttctccacaacctcgcttgtat
tcgggttgggatatttgtagagcaattgaattattggaaaaactacaaaggagtggagaa
gtaccaccacagaaacttcaggctttgcaaagagtccttcaaagtgaattctgcaatgct
gtgagagaggtatatgaacatgtctatgagactgtggacatcagtagcagtcctgaagtg
agagcgaacgctactgcaaaggctactgttgctgcatttgctgccagtgaaggacattct
catcctcgagttgttgagctaccaaaaacagaagagggccttggattcaatattatggga
ggcaaagaacaaaactctccaatctatatatcccgaataattccaggtggaattgctgat
agacatgggggcctcaaacgtggagatcaactcctctctgttaatggagtgagtgttgaa
ggagaacatcatgaaaaagctgtagaactgctgaaagccgcacaaggaaaggttaaatta
gtggtacgatacacacccaaagtcttagaagaaatggagtcgcgctttgaaaaaatgaga
tcagcaaaacgcaggcaacagacctaa

>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_2|162_aa
MKRAKEKQFLELLPPQKIVNKKQYCIPGGTAEISATVKDLKDAGVAIPITFPFNTPIWSM
QKTDGAWRITVDYVCKETIMDLLGLQLVLVLWRILTNTITKAHLQPSIFPFPKFNQSPLL
EMTVMWEKPDQQFAHAALCFQVPFATATAISSPHTDTVSCVH

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_2|489_bp
atgaagagggccaaggagaagcagttcctagaattgcttccacctcaaaaaatagtaaat
aaaaagcaatactgcattcctggagggactgcagagattagtgctaccgttaaggacttg
aaagatgcaggggtggcgattcccatcacattcccattcaacactcctatttggtctatg
cagaagacagatggagcttggagaataacagtggattatgtttgcaaagaaacaatcatg
gatcttctgggcctccaattagttctggttctctggagaatcctgactaatacaatcacc
aaggctcatcttcagccatcgatttttccctttccgaagttcaaccagtctccactatta
gagatgacagtgatgtgggagaaacctgatcagcagtttgctcatgctgctctctgtttc
caggtcccttttgcaacagcaactgccatctcctctcctcacacagacacagtcagctgt
gtacattga

>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_3|124_aa
MPPKDDKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKE
VPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAKVIYTRNTKGGDAAAA
GEDA

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_3|375_bp
atgccacccaaggatgacaagaagaaggatgctggaaagtcggccaagaaagacaaagac
ccagttaacaaatccgggggcaaggccaaaaagaagaagtggtccaaaggcaaagttcgg
gacaagctcaataacttagtcttgtttgacaaagctacctatgacaaactctgtaaggaa
gttcccaattataaacttataaccccagctgtggtctctgagagactgaagattcgaggc
tccctggccagggcagcccttcaggagctccttagtaaaggacttatcaaactggtttca
aagcacagagctaaagtaatttacaccagaaataccaagggcggagatgctgcagctgct
ggtgaagatgcatga

>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_4|60_aa
MERSMPLEQDLLLTFPKRRGYTTPRRATEKAPGFGFHSESSGEECLREVVGFQDALHLPS

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_4|183_bp
atggagaggtcaatgccattggaacaagacttattacttacatttcccaagagaagggga
tatacgacaccacgcagggccacagagaaagcaccaggttttggattccattcagaatcc
tctggagaagagtgtcttagggaagtagtaggatttcaggatgccctgcatctgccttcc
tga

>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_5|103_aa
MLEGQDRDAKSDVRMEEPTKWAIGDTVEEWSDSSKRVRSRNSAEMHTQPRSYPALNDSEL
AWNGHPKTKIHGRGDTGSTGSGPGHQVGETVGDGGEEGIDDEP

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_5|312_bp
atgttggaaggtcaagacagagatgccaaatcagatgtcaggatggaggagccaacaaaa
tgggcaataggggacacagttgaggaatggagtgacagtagcaagagagtgagaagtagg
aactcagcagagatgcacacccagccaagaagttaccctgcattaaatgacagtgagctg
gcctggaatggacaccccaaaaccaagatccatggcagaggggacactggcagtacaggg
tctggccctggacatcaggtgggtgaaactgttggggatggaggagaagaaggcattgat
gatgaaccatga

>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_6|161_aa
MGAVCEALQQYSLEGDRLAFHCESYPKLCVCDGLGGFRGHRAVSVFSCEAEKIWEGVSQR
ALGQSSRASGSGCQWKQNTHNATDIGHLVQHPTSTWQDSNFFPLVPVVFDLHKVGNGDLH
LGIQWVISGQDEEQSQTRSRAVKLLSGLTECDQIDKESSLS

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_6|486_bp
atgggggctgtctgtgaagctttgcagcagtacagcctagaaggggacaggcttgccttc
cactgtgagagttacccgaagctctgcgtctgtgatggtctagggggcttccgaggccat
cgggcagtgtcagtcttcagctgcgaagccgagaagatctgggaaggagtcagtcagaga
gccttgggccagagttccagggcctctgggagtggctgccagtggaagcaaaatacacat
aacgctacagacattggtcaccttgttcagcacccaacatcgacctggcaagactcgaac
tttttcccgttggtccctgttgtctttgatctacacaaagtggggaatggtgacctccat
ctgggaattcaatgggtgatctctgggcaagatgaagagcagtcacaaacccgatccagg
gctgttaaacttctttcaggactcactgaatgtgaccagatagataaggagagttctctg
agttag

>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_7|61_aa
MGWKAAVIAQARCNEDLNQSSGKGHVLDKGETGCSLAVSDVTTPNFPLDKRRPKIASGPI
G

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_7|186_bp
atgggttggaaggctgctgtgatagcccaggcgagatgcaatgaagacctgaaccagagt
agtggaaagggacatgtcctggataagggtgaaactggatgctccttggcagtttcagat
gtcaccacccctaactttccattggataaaagaaggcccaaaatagcctctggtcccata
ggctag

>gi568815587f:27481698_27682051|GENSCAN_predicted_peptide_8|375_aa
NAEFLQKGLQVHTCFGVYPHASVWHDCASQKKGCAVYLHVSVEFNKLIPENGFIKSGPSA
AGLLEFAGGPLQTLFAWVSPAEAAEQQILQNGKCCSLIVPLEASSQRGTWPYEVSVGPYW
EFHQVRRVMTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLESVNGPKAG
SRGLTSLADTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPLEPPLLFLLEE
YKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPV
SKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIR
IDTSCVCTLTIKRGR

>gi568815587f:27481698_27682051|GENSCAN_predicted_CDS_8|1128_bp
aatgctgagtttctacagaaagggttgcaggtccacacatgttttggcgtctacccacac
gcttctgtatggcatgactgtgcatcccagaagaagggctgtgctgtgtacctccacgtt
tcagtggaatttaacaaactgatccctgaaaatggtttcataaagtcaggaccctcagct
gcaggtctgttggagtttgctggaggtccactccagaccctgtttgcttgggtatcacca
gcagaggctgcagaacagcaaatattgcagaacggcaaatgttgctccctgattgttcct
ctggaagcttcgtctcagaggggcacctggccgtatgaggtgtcagtcggcccctactgg
gagttccaccaggtgagaagagtgatgaccatccttttccttactatggttatttcatac
tttggttgcatgaaggctgcccccatgaaagaagcaaacatccgaggacaaggtggcttg
gcctacccaggtgtgcggacccatgggactctggagagcgtgaatgggcccaaggcaggt
tcaagaggcttgacatcattggctgacactttcgaacacgtgatagaagagctgttggat
gaggaccagaaagttcggcccaatgaagaaaacaataaggacgcagacttgtacacgtcc
agggtgatgctcagtagtcaagtgcctttggagcctcctcttctctttctgctggaggaa
tacaaaaattacctagatgctgcaaacatgtccatgagggtccggcgccactctgaccct
gcccgccgaggggagctgagcgtgtgtgacagtattagtgagtgggtaacggcggcagac
aaaaagactgcagtggacatgtcgggcgggacggtcacagtccttgaaaaggtccctgta
tcaaaaggccaactgaagcaatacttctacgagaccaagtgcaatcccatgggttacaca
aaagaaggctgcaggggcatagacaaaaggcattggaactcccagtgccgaactacccag
tcgtacgtgcgggcccttaccatggatagcaaaaagagaattggctggcgattcataagg
atagacacttcttgtgtatgtacattgaccattaaaaggggaagatag