GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:54:33

Sequence gi568815587f:10361514_10605881 : 244368 bp : 43.52% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    660    655    6                               1.05
 1.03 Term -   8000   7862  139  1  1  103   47   103 0.852   5.14
 1.02 Intr -  17011  16844  168  0  0  109   72    58 0.259   5.36
 1.01 Init -  26259  26081  179  0  2   58   49   100 0.190   1.84
 1.00 Prom -  38352  38313   40                              -2.66

 2.04 PlyA -  38815  38810    6                               1.05
 2.03 Term -  41241  41079  163  2  1   74   37   128 0.018   3.71
 2.02 Intr -  49023  48975   49  1  1   87   94    55 0.088   3.74
 2.01 Init -  59675  59519  157  2  1   71    6   107 0.008   0.87
 2.00 Prom -  59729  59690   40                              -4.46

 3.02 PlyA -  59846  59841    6                               1.05
 3.01 Sngl -  61356  60985  372  0  0   70   43   153 0.674   5.13
 3.00 Prom -  86086  86047   40                              -2.16

 4.00 Prom +  87809  87848   40                              -6.46
 4.01 Init +  89509  89530   22  0  1  103  117    26 0.174   6.64
 4.02 Intr +  89650  89751  102  2  0   90   99    38 0.853   5.25
 4.03 Intr +  93873  93935   63  1  0   65   61    67 0.252   0.39
 4.04 Intr + 100002 100227  226  1  1   86   76   403 0.828  35.94
 4.05 Intr + 117013 117217  205  1  1   84   74   180 0.523  15.40
 4.06 Intr + 120550 120712  163  0  1  115   80   197 0.979  21.15
 4.07 Intr + 123307 123526  220  2  1   93   87   387 0.958  36.46
 4.08 Intr + 125632 125851  220  1  1   84  100   148 0.800  13.90
 4.09 Intr + 131836 132125  290  0  2   87   33   418 0.571  32.24
 4.10 Intr + 133155 133317  163  0  1   80   25   125 0.647   5.38
 4.11 Intr + 133386 133517  132  2  0  107  113   114 0.999  16.64
 4.12 Intr + 134057 134220  164  1  2   67   83   279 0.996  24.07
 4.13 Intr + 135299 135425  127  2  1   69   92   109 0.737  10.08
 4.14 Intr + 138573 138736  164  2  2   60   96   294 0.998  26.17
 4.15 Intr + 139957 140077  121  1  1  121   86   158 0.998  19.40
 4.16 Intr + 141208 141381  174  0  0   73  116   100 0.950  11.44
 4.17 Intr + 143036 143146  111  1  0  -52   80   181 0.655   3.88
 4.18 Term + 144195 144371  177  2  0   94   42   181 0.999  11.79
 4.19 PlyA + 145590 145595    6                               1.05

 5.12 PlyA - 147610 147605    6                               1.05
 5.11 Term - 149677 149611   67  0  1   91   38    48 0.242  -2.49
 5.10 Intr - 157628 157521  108  1  0   48  115    66 0.427   4.70
 5.09 Intr - 163860 163679  182  0  2   88   71    63 0.693   3.27
 5.08 Intr - 169238 169130  109  1  1  131  100    32 0.733   8.99
 5.07 Intr - 193339 193254   86  1  2    8  116    61 0.007  -0.48
 5.06 Intr - 197784 197625  160  2  1   95    9   185 0.019  11.29
 5.05 Intr - 198381 198303   79  1  1  116   97    11 0.971   3.41
 5.04 Intr - 199287 198982  306  1  0   90   84    65 0.550   2.72
 5.03 Intr - 202566 202427  140  2  2   84  105    20 0.975   3.41
 5.02 Intr - 202861 202690  172  2  1   66   94   122 0.985   9.60
 5.01 Init - 207019 206935   85  1  1  110  100    84 0.998  10.78
 5.00 Prom - 207594 207555   40                              -4.96

 6.11 PlyA - 209744 209739    6                               1.05
 6.10 Term - 215062 214819  244  0  1   74   49    47 0.324  -5.23
 6.09 Intr - 219076 218942  135  0  0  125   75   205 0.894  22.58
 6.08 Intr - 220473 220354  120  2  0   94   84   124 0.972  12.21
 6.07 Intr - 230099 230035   65  2  2   79  106     7 0.563  -0.88
 6.06 Intr - 232086 231979  108  0  0  103  111    -7 0.778   3.58
 6.05 Intr - 232682 232633   50  0  2   92   91    -2 0.755  -1.10
 6.04 Intr - 239546 239405  142  2  1  126   95   188 0.952  23.23
 6.03 Intr - 241738 241607  132  1  0   60  109   123 0.987  12.44
 6.02 Intr - 243032 242874  159  2  0  102   48   127 0.593  10.28
 6.01 Intr - 244173 244027  147  0  0   75   75    31 0.473   0.93

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  42606  42763  158  1  2   21   44   197 0.929   6.70
S.002 Term + 179549 179837  289  2  1   74   53   152 0.873   5.15
S.003 Term - 197784 197598  187  2  1   95   37   214 0.980  13.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:10361514_10605881|GENSCAN_predicted_peptide_1|161_aa
MALHEPRIQPLMQPAHNFPSFIFINPTGKLDFTQDCAENQMLELGSGFLDKHIAIIRIYP
CMFPCQGIHSLLAKNFHHSSSPALRTPELWKQNPLEQSWVLGYQKNLKALVLEYIGPLIQ
REDAQTPGHRFQSKAQVMGSVGAALNSLPRDGYTSSPNLTT

>gi568815587f:10361514_10605881|GENSCAN_predicted_CDS_1|486_bp
atggccctgcatgagcccagaattcagcccctgatgcagccagcccacaacttcccaagt
tttattttcattaacccaactggaaaattggacttcactcaggattgtgctgaaaaccag
atgctggagctgggctctggtttcctagataaacacattgcaataatacgcatctaccct
tgtatgtttccatgccagggtatccacagcctccttgcaaagaatttccaccactcaagt
tccccagcactaaggacccccgagctctggaagcaaaatcctctggaacaatcatgggta
ttagggtatcagaagaacctgaaagccttggtcctggagtatataggcccattgatccag
cgggaggatgcccagacaccaggtcacaggtttcaaagtaaggcccaagtcatgggatcc
gtgggggcagccctcaactcacttcccagagatgggtatacctctagccctaatctgacc
acctga

>gi568815587f:10361514_10605881|GENSCAN_predicted_peptide_2|122_aa
MGNDFMSKTPKAMATKVKIDKWDLIKLKSFCTAKETIIRVNRQPSEKTTPSKNLIDLKHG
AVPKDDLDRLYIYGKMATSNSKLHLPTYMSNGKRTSLFPNAQDQFLEFTQKDHSWAMYPS
LN

>gi568815587f:10361514_10605881|GENSCAN_predicted_CDS_2|369_bp
atgggcaacgacttcatgtctaaaacaccaaaagcaatggcaacaaaagtcaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagta
aacaggcaaccctcagaaaaaacaaccccatcaaaaaacttgattgatttgaaacatggg
gctgtgcccaaagacgacttggacagactttacatctatggaaaaatggctaccagcaat
tccaagcttcatcttcccacatacatgtccaatgggaaaagaacaagtctcttccccaat
gctcaggatcaattcctggaattcactcagaaagaccactcttgggccatgtacccatcc
ctgaactaa

>gi568815587f:10361514_10605881|GENSCAN_predicted_peptide_3|123_aa
MDKFLDTYTLSRLNQEEVKSLNRPITSSEIEAVMNSLPTKKSSEPDRFTAKFYQRDKEEL
VPFLLKLFQTIEDEGLLPNSFYEASIILIPKPGRGTTEKENFRPISLMNIDRKILNKIPA
NQI

>gi568815587f:10361514_10605881|GENSCAN_predicted_CDS_3|372_bp
atggataaattcctggacacatacaccctctcaagactaaaccaggaagaagtgaaatcc
ctgaatagaccaataacaagttctgaaattgaggcagtaatgaatagcctaccaaccaaa
aaaagctcagaaccagacagattcacagccaaattctaccagagggacaaagaggagctg
gtaccattccttctgaaactattccaaacaatagaagatgagggactcctccctaactca
ttttatgaggccagcatcatcctgataccaaaacctggcagaggcacaacagaaaaagaa
aatttcaggccaatatccctgatgaacattgataggaaaatcctcaataaaataccagca
aaccaaatctag

>gi568815587f:10361514_10605881|GENSCAN_predicted_peptide_4|947_aa
MALSSEPEAVALTPVRSLALSPVPVPVPTPASAVARAPAASGGVAESSQRSELEAHVGAV
SGSEMPRQFPKLNISEVDEQVRLLAEKVFAKVLREEDSKDALSLFTVPEDCPIGQKEAKE
RELQKELAEQKSVETAKRKKSFKMIRSQSLSLQMPPQQDWKGPPAASPAMSPTTPVVTGA
TSLPTPAPYAMPEFQRVTISGDYCAGITLEDYEQAAKSLAKALMIREKYARLAYHRFPRI
TSQYLGHPRADTAPPEEGLPDFHPPPLPQEDPYCLDDAPPNLDYLVHMQGGILFVYDNKK
MLEHQEPHSLPYPDLETYTVDMSHILALITDGPTQGWPLQMLEASKLESSMRLNYGLSPS
PTCRKTYCHRRLNFLESKFSLHEMLNEMSEFKELKSNPHRDFYNVRKVDTHIHAAACMNQ
KHLLRFIKHTYQTEPDRTVAEKRGRKITLRQVFDGLHMDPYDLTVDSLDVHAVSELLLQC
RQQTAALAGDSAPWKATMIVLAGRWGLCCSFTGGLAKGSQADRVRIHGPGAQEFLRFHAR
IDIEDVFRCGHTEGRLVKGRQTFHRFDKFNSKYNPVGASELRDLYLKTENYLGGEYFARM
VKEVARELEESKYQYSEPRLSIYGRSPEEWPNLAYWFIQHKVYSPNMRWIIQVPRIYDIF
RSKKLLPNFGKMLENIFLPLFKATINPQDHRELHLFLKYVTGFDSVDDESKHSDHMFSDK
SPNPDVWTSEQNPPYSYYLYYMYANIMVLNNLRRERGLSTFLFRPHCGEAGSITHLVSAF
LTADNISHGLLLKKSPVLQYLYYLAQIPIAMSPLSNNSLFLEYSKNPLREFLHKGLHVSL
STDDPMQFHYTKEALMEEYAIAAQVWKLSTCDLCEIARNSVLQSGLSHQEKQKFLGQNYY
KEGPEGNDIRKTNVAQIRMAFRYETLCNELSFLSDAMKSEEITALTN

>gi568815587f:10361514_10605881|GENSCAN_predicted_CDS_4|2844_bp
atggccctgtcgtccgaacccgaggcggtggcgctgactccggtccgatcccttgccctg
tcccctgttcctgtccctgtccctacccctgcctctgcggtggcccgagccccagcggcc
tcaggaggagtggcagagtccagccagcgctcggagctggaggcccacgtgggagcagtg
agcggctctgagatgccgcggcagtttcccaagctgaacatctctgaagtggatgagcaa
gtccggctcctggcggagaaggtgtttgctaaagtgctccgagaagaggacagcaaagat
gccctgtccctgttcactgtcccagaggactgccccatcgggcaaaaggaagccaaggag
agggagctgcagaaggagctggcagagcagaagtctgtggagaccgcaaaaagaaagaaa
agtttcaagatgattcggtcccagtccctgtctctgcaaatgccgccacagcaagattgg
aagggccccccggcagccagtccggccatgtctcccacaacccctgtggtcactggagcc
acttccctgcccacgccagcaccctatgccatgcctgagttccagcgggtcaccatcagc
ggagattactgtgccgggatcactttggaggactatgagcaggcagccaagagtctggcc
aaggccctaatgatccgggagaagtatgcgcggctcgcctaccaccgcttcccgcggatc
acatcccagtacctgggtcatccgcgggcggatactgcacctccggaagagggccttcca
gacttccaccctcctccactgccccaggaagacccctactgcctggatgatgcacccccc
aacctggattacttggtccacatgcaggggggcatcctctttgtgtatgataacaagaag
atgctggagcaccaggagccgcacagcctaccctaccccgacctggagacctacacggtg
gacatgagccacatcctggctctcatcaccgatggccccacccagggttggcccctgcag
atgctggaggcctccaaactggagagctcgatgcgactcaactatggtctctccccatct
ccaacttgcaggaaaacctattgtcaccggcgactgaactttctggaatccaagttcagc
cttcatgagatgttaaacgaaatgtccgagttcaaagagttgaagagtaacccccaccgg
gacttctataacgtgagaaaggtggacacacacatccatgcggccgcctgcatgaaccaa
aagcatctgctgcgcttcatcaagcacacataccagacggagcctgacaggactgtggca
gagaagcggggccggaagatcaccctgcggcaggtgtttgacggcctgcacatggacccc
tacgacctcactgtggactcactggatgtccacgcggtgagtgagcttctgctccagtgc
cgccagcagacagcagccctggctggggactcagccccctggaaagccaccatgattgtg
cttgccgggaggtggggcctctgctgttccttcacagggggccttgccaaaggatcccaa
gctgaccgagtgaggatccatggtcctggtgctcaggagtttctaaggtttcatgcaaga
attgacatagaagatgtctttcggtgtggccatacagaaggccgcctcgtaaagggccgg
cagacattccaccgctttgacaagttcaactccaaatacaaccctgtgggggccagtgag
ctgcgtgacctgtatttgaaaactgaaaactatctgggaggagagtactttgctcggatg
gtcaaggaggttgcccgggagctggaggagagcaagtaccagtactcagagccacggctc
tccatctacggccgcagtcctgaggagtggcccaacctggcctactggttcatccagcac
aaggtctactctcccaacatgcgctggatcatccaggtgccccggatttatgacatattt
aggtcaaagaagctgctgccaaactttgggaagatgctggagaacatcttcctgcccctt
ttcaaggccactatcaacccccaagatcatcgagagcttcacctcttccttaaatatgtg
acggggtttgacagcgtggatgatgagtccaagcacagcgaccacatgttttccgacaag
agcccaaacccggacgtctggaccagtgagcagaacccaccctacagctactacctgtac
tacatgtatgccaacatcatggtgctcaacaacctccgcagggagcgcggcctgagcacg
ttcctgttccggccgcactgtggggaagccggctccatcacccacctggtgtctgccttc
ctcactgctgacaacatttcccacgggctgctcctcaagaagagtccggtattgcagtat
ctctactaccttgctcagatccccattgccatgtctcctcttagcaacaacagtttgttc
ctcgaatattccaagaaccctctgagggaattcctacacaagggactgcatgtttctctt
tccaccgatgaccccatgcagttccactacacgaaggaagcacttatggaagaatatgcc
attgcagctcaagtgtggaagctgagcacctgcgacctgtgtgagatcgccaggaacagc
gtgctgcagagcggcctctcgcatcaggaaaagcaaaagtttctgggacaaaattattat
aaagaaggacctgaaggaaatgatattcgaaagacaaatgtggctcagatccggatggca
ttccgatatgagaccttatgcaatgagctcagcttcctgtctgatgctatgaaatcagaa
gagatcaccgccttgaccaactag

>gi568815587f:10361514_10605881|GENSCAN_predicted_peptide_5|497_aa
MARCFSLVLLLTSIWTTRLLVQGSLRAEELSIQVSCRIMGITLVSKKANQQLNFTEAKEA
CRLLGLSLAGKDQVETALKASFETCSYGWVGDGFVVISRISPNPKCGKNGVGVLIWKVPV
SRQFAAYCYNSSDTWTNSCIPEIITTKDPIFNTQTATQTTEFIVSDSTYSVASPYSTIPA
PTTTPPAPASTSIPRRKKLICVTEVFMETSTMSTETEPFVENKAAFKNEAAGFGGVPTAL
LVLALLFFGAAAGLGFCYVKRYVKAFPFTNKNQQKEMIETKVVKEEKANDSNPNEESKKT
DKNPEESKSPSKTTKNSRALFYLCSHTTTTVINSITKELNDKRTAKVASGQEKHLLFEVQ
PGSDSSAFWKVVVRVVCTKINKSSGIVEASRIMNLYQFIQLYKDITSQAAGVLAQSSTSE
EPDENSSSVTSCQASLWMGRVKQLTDEEECCICMDGRADLILPCAHSFCQKCIDKWQQTS
TVHSPGVVDPYPNRQQK

>gi568815587f:10361514_10605881|GENSCAN_predicted_CDS_5|1494_bp
atggccaggtgcttcagcctggtgttgcttctcacttccatctggaccacgaggctcctg
gtccaaggctctttgcgtgcagaagagctttccatccaggtgtcatgcagaattatgggg
atcacccttgtgagcaaaaaggcgaaccagcagctgaatttcacagaagctaaggaggcc
tgtaggctgctgggactaagtttggccggcaaggaccaagttgaaacagccttgaaagct
agctttgaaacttgcagctatggctgggttggagatggattcgtggtcatctctaggatt
agcccaaaccccaagtgtgggaaaaatggggtgggtgtcctgatttggaaggttccagtg
agccgacagtttgcagcctattgttacaactcatctgatacttggactaactcgtgcatt
ccagaaattatcaccaccaaagatcccatattcaacactcaaactgcaacacaaacaaca
gaatttattgtcagtgacagtacctactcggtggcatccccttactctacaatacctgcc
cctactactactcctcctgctccagcttccacttctattccacggagaaaaaaattgatt
tgtgtcacagaagtttttatggaaactagcaccatgtctacagaaactgaaccatttgtt
gaaaataaagcagcattcaagaatgaagctgctgggtttggaggtgtccccacggctctg
ctagtgcttgctctcctcttctttggtgctgcagctggtcttggattttgctatgtcaaa
aggtatgtgaaggccttcccttttacaaacaagaatcagcagaaggaaatgatcgaaacc
aaagtagtaaaggaggagaaggccaatgatagcaaccctaatgaggaatcaaagaaaact
gataaaaacccagaagagtccaagagtccaagcaaaactaccaaaaactcccgagccttg
ttttacctctgctctcacaccaccacaacagtcatcaactcaataacaaaagaactcaat
gacaaaagaacggctaaagtggcttctggccaggaaaaacatcttctctttgaggtacaa
cctgggtctgattcctctgctttttggaaagtggttgtacgggtggtctgtaccaagatt
aacaaaagcagtggcattgtggaggcatcacggatcatgaatttataccagtttattcaa
ctttataaagatatcacaagtcaagcagcaggagtattggcacagagctccacctctgaa
gaacctgatgaaaactcatcctctgtaacatcttgtcaggctagtctttggatgggaagg
gtgaagcagctgaccgatgaggaggagtgttgtatctgtatggatgggcgggctgacctc
atcctgccttgtgctcacagcttttgtcagaagtgtattgataaatggcagcagaccagt
actgtccacagcccaggggttgtggacccctaccccaacagacagcaaaaataa

>gi568815587f:10361514_10605881|GENSCAN_predicted_peptide_6|433_aa
MYMDTALGMVEIKQAFKSDSLRLNPGSVTPCHLEQVNDRSGLGLFTHKQNVFVQLSLAFR
NDSYTLESRINQAERERNLTEENTEKELENFKASITVIVEPDSSASLWHHCEHRETYQKL
LEDIAVLHRLAARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKK
LANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSI
PSLPALSESPNGKGSLPVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARM
EEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVH
FLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSW
WSSGLQHEQPTEQ

>gi568815587f:10361514_10605881|GENSCAN_predicted_CDS_6|1302_bp
atgtatatggacacagctctcggcatggtggaaataaaacaggctttcaaatcagacagt
ctgaggttaaatcctggctccgttactccgtgtcaccttgaacaagttaatgaccgttct
ggtcttggcctctttacccataaacagaacgtgtttgtgcaactgtccttggcctttaga
aatgacagctacactctggaatctagaattaaccaggctgaaagggaacgcaacctgaca
gaggagaacactgagaaagaactggaaaacttcaaagcttccattacggtaattgtggag
cctgattcctcagcttcactctggcaccactgtgagcaccgggaaacctaccagaagttg
ctggaggacatcgctgtcctgcaccgcctggctgcccgcctctccagccgagctgaggtg
gtaggcgccgtccgccaggaaaagcgcatgtcgaaagcaacggaagtgatgatgcagtat
gtggagaatctaaagaggacgtatgagaaggaccatgcggagctcatggagtttaaaaag
cttgcaaatcagaattcaagccgcagctgtggcccctctgaagatggggtccctcgcacg
gcacggtccatgtccctcacgctgggaaagaatatgcctcgccggagggtcagcgttgct
gtggttcctaagtttaatgccctgaatctgcctggccaaactcccagctcatcatccatt
ccctccttaccagccttgtcggaatcacccaatgggaaaggcagcctacctgtcacttca
gcactgcctgcacttttggaaaatggaaagacaaatggggacccagattgtgaagcctct
gctcctgcgctgaccctgagctgcctggaggagcttagtcaggagaccaaggccaggatg
gaggaagaagcctacagcaagggattccaagaaggtctaaagaagaccaaagaacttcaa
gacctgaaggaggaggaggaagaacagaagagtgagagtcctgaggaacctgaagaggta
gaagaaactgaggaagaggaaaagggcccaagaagcagcaaacttgaagaattggtccat
ttcttacaagtcatgtatcccaaactgtgtcagcactggcaagtgatctggatgatggct
gcagtgatgctggtcttgactgttgtgctggggctctacaattcctataactcttgtgca
gagcaggctgatgggccccttggaagatccacttgctcggcagcccagagggactcctgg
tggagctcaggactccagcatgagcagcctacagagcagtag