GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:07:14

Sequence gi568815586r:93540825_93741586 : 200762 bp : 40.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8587   8803  217  0  1   70   93    39 0.275   1.55
 1.02 Intr +  23693  23782   90  0  0  111   98    35 0.637   5.85
 1.03 Intr +  29574  29718  145  1  1  100   21   188 0.134  11.72
 1.04 Intr +  30749  30803   55  2  1  127   27    55 0.056   1.36
 1.05 Intr +  31972  32212  241  0  1   81   91    83 0.007   4.10
 1.06 Term +  33898  34355  458  2  2   30   36   385 0.014  21.80
 1.07 PlyA +  34604  34609    6                               1.05

 2.05 PlyA -  35325  35320    6                               1.05
 2.04 Term -  50943  50675  269  1  2   56   48   180 0.009   5.47
 2.03 Intr -  56378  56357   22  2  1   50   90    36 0.009  -3.80
 2.02 Intr -  62166  61984  183  0  0   44  113   130 0.574  10.16
 2.01 Init -  91596  91411  186  0  0   83   66   127 0.686   9.10
 2.00 Prom -  96156  96117   40                              -3.95

 3.02 PlyA -  97877  97872    6                               1.05
 3.01 Sngl - 100762  99998  765  1  0  122   49  1051 0.870 100.44
 3.00 Prom - 102391 102352   40                              -7.45

 4.00 Prom + 103276 103315   40                              -1.55
 4.01 Init + 117143 117288  146  1  2   77   71    99 0.527   6.74
 4.02 Intr + 122656 122777  122  1  2   70   18   127 0.089   3.12
 4.03 Intr + 137001 137056   56  1  2  110   65   111 0.979   8.78
 4.04 Intr + 137945 138248  304  1  1  105   96   224 0.986  20.14
 4.05 Term + 147151 147311  161  2  2   27   33   143 0.221  -0.18
 4.06 PlyA + 150184 150189    6                               1.05

 5.04 PlyA - 150267 150262    6                               1.05
 5.03 Term - 174072 173788  285  0  0   71   41   122 0.092   0.22
 5.02 Intr - 192822 192654  169  2  1  -15   85   126 0.103   1.03
 5.01 Init - 196942 196875   68  1  2  110  116    61 0.545  11.70

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  31861  32063  203  2  2  123   46   158 0.875  11.67
S.002 Init -  62690  62664   27  2  0  105   81    25 0.949   3.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:93540825_93741586|GENSCAN_predicted_peptide_1|401_aa
MANTSLLSSTQAGCHLEWRVAVVIGQGGRPSREDGVQVLRTQGGKGKRDVSQVSKPPCLL
HCPTGLRKHKLEGTIVLGPGSWRLSRNFKKAKLFLVAHQSLKGPDQGDRLRSPAVGTGTS
TASPRHRCVLEPESLVSEDPQSLLHAHPPQKVAAGGKPGSSPRVEVSQPGLVLGFALTSR
KDANPSLTPARAATCLCRGDPSLMTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLA
KALRELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRI
EYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKPLY
TSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQV

>gi568815586r:93540825_93741586|GENSCAN_predicted_CDS_1|1206_bp
atggcaaacacaagcctcctctcatcaacacaagctggctgccacctcgagtggagggtg
gcagtggtcattgggcagggtgggagaccaagtagggaggatggggtgcaggtgctgaga
acccagggtggaaaggggaagcgggatgtgagccaagtctccaaacccccatgcttgctc
cattgtccaactggacttaggaaacacaaattagaaggtactattgttttggggccaggc
tcatggagattaagcaggaacttcaagaaagccaagctcttcttggtagcacaccagagt
ctgaagggacctgatcaaggggaccgcctccggtccccggccgtgggcaccgggacgagc
acggcgtccccacgccatcgatgtgtcttagagccggagagtctggtttccgaggaccca
cagtcgctcctgcacgcccaccccccgcaaaaggtcgcagccggagggaaacccggcagc
agtccgagagtggaggtgtcccagcccggactcgttttgggattcgcactgacttcaagg
aaggacgcgaacccttctctgaccccagctcgggcggccacctgtctttgccgcggtgac
ccttctctcatgaccctgcggtgccttgagccctccgggaatggcggggaagggacgcgg
agccagtgggggaccgcggggtcggcggaggagccatccccgcaggcggcgcgtctggcg
aaggccctgcgggagctcggtcagacaggatggtactggggaagtatgactgttaatgaa
gccaaagagaaattaaaagaggcaccagaaggaactttcttgattagagatagctcgcat
tcagactacctactaacaatatctgttaaaacatcagctggaccaactaatcttcgaatc
gaataccaagacggaaaattcagattggactctatcatatgtgtcaaatccaagcttaaa
caatttgacagtgtggttcatctgatcgactactatgttcagatgtgcaaggataagcgg
acaggtccagaagccccccggaacggcactgttcacctttatctgaccaaaccgctctac
acgtcagcaccatctctgcagcatctctgtaggctcaccattaacaaatgtaccggtgcc
atctggggactgcctttaccaacaagactaaaagattacttggaagaatataaattccag
gtataa

>gi568815586r:93540825_93741586|GENSCAN_predicted_peptide_2|219_aa
MAEGEEEADTFFTTWQERDSKGGNATFKTIRSHENSLTIMRTARGKLPPMIQSPPTRCRP
RHGSLDNPVKQAQQRSLGQALCQLLHLENYKDGKDPDDNLAVSCMSSLTSVFSLSPPSPR
RVKWWLRQSTVKRLDVGQPVTGSLLPTLGYIRSWETRAAPRTRLGGAATPQLRGAPHSTL
ATDKKNFCCITPWRQDHFPLERQCVHIVDARASPCRNSV

>gi568815586r:93540825_93741586|GENSCAN_predicted_CDS_2|660_bp
atggcagaaggtgaagaggaagcagacaccttcttcacaacgtggcaggagagagatagc
aaagggggaaatgccacttttaaaaccatcagatctcatgagaactcacttactatcatg
agaacagcacggggcaaactgccccccatgatccaatcacctcccaccaggtgccgccct
cgacacggaagtttggacaacccagtaaagcaggcccagcagcgctctctaggccaggcc
ctttgtcagctacttcacctagaaaactacaaagatggaaaggacccagatgacaacctg
gctgtgagttgtatgagttcactgacttctgtgttttccctgtcaccaccctctcctcgc
agagtcaagtggtggttacgccaatctacagtgaaacgccttgacgttggtcagcctgtg
accggctccttgctgccgacgctgggttacataaggtcctgggagacccgagcggcgccc
cggacgcgtctgggaggagccgccacgccacagctccgtggggctccgcactctaccctg
gccacagacaaaaagaacttctgctgcatcaccccgtggcgccaggatcacttccctctt
gagagacagtgtgtgcacatcgtagacgctagagccagcccctgcaggaactccgtttga

>gi568815586r:93540825_93741586|GENSCAN_predicted_peptide_3|254_aa
MAAYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQ
KRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD
VPPPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKR
VLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVR
KAMEAVAAQGKAKK

>gi568815586r:93540825_93741586|GENSCAN_predicted_CDS_3|765_bp
atggccgcctacaaactggtgctgatccggcacggcgagagcgcatggaacctggagaac
cgcttcagcggctggtacgacgccgacctgagcccggcgggccacgaggaggcgaagcgc
ggcgggcaggcgctacgagatgctggctatgagtttgacatctgcttcacctcagtgcag
aagagagcgatccggaccctctggacagtgctagatgccattgatcagatgtggctgcca
gtggtgaggacttggcgcctcaatgagcggcactatgggggtctaaccggtctcaataaa
gcagaaactgctgcaaagcatggtgaggcccaggtgaagatctggaggcgctcctatgat
gtcccaccacctccgatggagcccgaccatcctttctacagcaacatcagtaaggatcgt
aggtatgcagacctcacagaagatcagctaccctcctgtgagagtctgaaggatactatt
gccagagctctgcccttctggaatgaagaaatagttccccagatcaaggaggggaaacgt
gtactgattgcagcccatggcaacagcctccggggcattgtcaagcatctggagggtctc
tctgaagaggctatcatggagctgaacctgccgactggtattcccattgtctatgaattg
gacaagaacttgaagcctatcaagcccatgcagtttctgggggatgaagagacggtgcgc
aaagccatggaagctgtggctgcccagggcaaggccaagaagtga

>gi568815586r:93540825_93741586|GENSCAN_predicted_peptide_4|262_aa
MVTAEHYTKQEALSSLGPMKPVLPKGTEKISLELNLSFWWECPSQIRIRTYISSPARLSG
IWPWTESYTIGFPGSKAFGLGLSHAVNISGLRGGVWDRVSPSRGRTARGEMEARDKQVLR
SLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDILPSRGPKAFD
TFLDSLQEFPWVREKLKKAREEAMTDLPAVITNYMQYLVLCRSGYVQMETESPAEERVGC
SSQLKSELKMARGWKREGETNG

>gi568815586r:93540825_93741586|GENSCAN_predicted_CDS_4|789_bp
atggtgacagcagagcattacaccaagcaggaagccctttctagcctggggcccatgaag
ccagtcctgccaaaggggaccgaaaagatttcactggagctcaacctttcattttggtgg
gaatgcccaagccagatcagaattaggacttacatcagcagccccgccaggctttcaggc
atttggccttggactgagagttacacaattggcttccctggttctaaggcctttggactt
ggactgagccatgctgtcaacatctcagggttgcgagggggagtgtgggatcgggtgtcg
cctagccgtggtcgtactgcccggggagaaatggaggccagagacaaacaagtactccgc
tcacttcgcctggagctgggtgcagaggtattggtggagggactggttcttcagtacctc
taccaggaaggaatcttgacggaaaaccatattcaagaaatcaatgctcaaaccacaggc
ctccggaaaacaatgctcctgctggatatcctaccttccaggggccctaaagcatttgat
acattcctagattccctacaggagtttccctgggtcagggagaagctgaagaaggcaagg
gaagaggccatgaccgacctgcctgcagtcattacaaactacatgcagtaccttgtgctc
tgtagatcaggttatgtccaaatggagacagagtctcctgctgaagaacgagttggatgc
tcctctcagttaaaaagtgagctgaagatggctcgaggatggaagagagaaggagagaca
aatggctag

>gi568815586r:93540825_93741586|GENSCAN_predicted_peptide_5|173_aa
MDNLKVYNIRGSISPSGSTEWTRQPPQELNVTASPMLAKQPGLPSVLAHWAPPAAIPDGW
VMGASTASEAHDITSSVWLSLEEQTFTLQPPLYQGVAMRQFCPMNQKRNCVEDFWKDYFF
SQEKVTDAVGAEQLPCLFQPYGCAVGSCDCLATTRKRKAKRIAETLALMPLSQ

>gi568815586r:93540825_93741586|GENSCAN_predicted_CDS_5|522_bp
atggacaatttaaaggtgtacaacatccgaggttccatttcaccctcaggcagcacggag
tggacaaggcagcctccccaggaactcaatgtcacagcatcaccaatgcttgccaagcag
ccaggccttccttcagtgctggcacactgggcacctccagcagctattccagacggctgg
gtgatgggggcaagcacagcatcagaggcccatgacatcacctcttcagtgtggctgagt
ctagaagagcaaacattcactttgcagcctcccttgtaccaaggagtggccatgagacaa
ttctgcccaatgaatcagaagaggaattgtgttgaggatttctggaaagactacttcttt
tcccaagaaaaagtgacagacgcagtaggggctgagcaacttccgtgcctcttccagcct
tacggatgtgctgttggtagctgtgactgccttgctactacgaggaaaaggaaggccaag
agaatagcagagacactcgctctgatgcctttgagccaatga