GENSCAN 1.0	Date run:  3-Nov-116	Time: 14:36:09

Sequence gi568815586r:43695588_43904574 : 208987 bp : 38.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    537    532    6                               1.05
 1.03 Term -   3717   3606  112  2  1   28   49   196 0.622   6.75
 1.02 Intr -  14801  14716   86  2  2   99   44    43 0.246  -1.30
 1.01 Init -  15666  15601   66  0  0   68  108    27 0.486   3.82
 1.00 Prom -  22583  22544   40                              -3.85

 2.08 PlyA -  23424  23419    6                               1.05
 2.07 Term -  35115  34789  327  0  0  132   41   160 0.966   9.42
 2.06 Intr -  41072  40794  279  2  0   27  106   151 0.479   7.55
 2.05 Intr -  46968  46870   99  0  0   56   56    98 0.812   2.79
 2.04 Intr -  50651  50459  193  1  1   75  116   113 0.999  11.37
 2.03 Intr -  53022  52863  160  1  1   82   75   163 0.999  12.52
 2.02 Intr -  59674  58749  926  0  2  149   91   565 0.984  52.84
 2.01 Init -  64019  63721  299  2  2   75   78   141 0.178   8.70
 2.00 Prom -  67577  67538   40                              -5.85

 3.00 Prom +  69881  69920   40                              -6.35
 3.01 Init +  72525  72685  161  2  2   57   87    78 0.819   3.95
 3.02 Intr +  75633  75778  146  0  2   57   97    85 0.994   5.31
 3.03 Intr +  76593  76775  183  1  0   44  113   122 0.965   9.14
 3.04 Intr +  77325  77485  161  1  2   68   92   186 0.988  15.79
 3.05 Intr +  78378  78442   65  2  2   68  106    99 0.484   6.30
 3.06 Intr +  86720  86903  184  2  1   54  103   222 0.998  19.17
 3.07 Intr +  88799  88934  136  1  1   52   47    88 0.629   0.32
 3.08 Intr +  90100  90284  185  2  2   34  119    52 0.477   1.49
 3.09 Intr +  90812  90970  159  1  0   13   91   194 0.953  11.46
 3.10 Term +  96047  96217  171  1  0  -14   43   141 0.138  -3.76
 3.11 PlyA +  96287  96292    6                               1.05

 4.09 PlyA -  96949  96944    6                               1.05
 4.08 Term - 100168  99998  171  1  0   88   39   180 0.954   9.94
 4.07 Intr - 102246 102121  126  0  0   63   91   147 0.986  12.46
 4.06 Intr - 103915 103811  105  1  0   87  107    44 0.978   5.69
 4.05 Intr - 104943 104848   96  0  0   21   62   109 0.090   0.89
 4.04 Intr - 106877 106699  179  0  2   27  103    77 0.106   1.82
 4.03 Intr - 108985 108908   78  2  0   89   49    65 0.095   1.30
 4.02 Intr - 110443 110225  219  2  0   74   -8   171 0.117   3.45
 4.01 Init - 110760 110634  127  0  1   53   87   237 0.508  18.47
 4.00 Prom - 135087 135048   40                              -1.05

 5.00 Prom + 147108 147147   40                              -8.05
 5.01 Init + 149065 149341  277  0  1   54  111   114 0.377   7.50
 5.02 Intr + 161326 161450  125  2  2   29  116    22 0.310  -1.52
 5.03 Term + 168300 168812  513  2  0   69   37   271 0.610  13.46
 5.04 PlyA + 169180 169185    6                               1.05

 6.00 Prom + 189313 189352   40                              -3.25
 6.01 Sngl + 191971 192150  180  0  0   95   45   167 0.905   7.88
 6.02 PlyA + 194019 194024    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 104931 104848   84  0  0   42   62   112 0.844   4.87
S.002 Term - 128903 128766  138  2  0   96   50   103 0.929   4.28
S.003 Init - 130603 130526   78  1  0   91   51    56 0.898   1.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:43695588_43904574|GENSCAN_predicted_peptide_1|87_aa
MNKTENDPSSEDGGRELVNNKQEKRGKSGEDYVLHVGYQLSYSRIGHQPESFRTNAPKDM
ALMSGGMPGSSSRVELEKTTQAQEEQF

>gi568815586r:43695588_43904574|GENSCAN_predicted_CDS_1|264_bp
atgaacaagacagagaatgatccttctagtgaagatggtgggagggagctggtaaacaat
aaacaagagaagagagggaagagtggggaagactatgtcttgcatgttggataccagctc
agctacagcaggatagggcaccagccagagtcattccgaaccaatgcaccaaaagatatg
gctctgatgagtggaggaatgccaggatcttcatctcgagttgaattagaaaaaacgaca
caggcacaggaggagcagttttaa

>gi568815586r:43695588_43904574|GENSCAN_predicted_peptide_2|760_aa
MSHRTWTGFAFIPLSPSGFQADRYTFFPHLRMYSSDPISRLHFLIPWKLGGRRNKRITIV
WRLSELLAPQASVRCWPDFLVLGKRDFISQSGSRNPGPERHCYRRMEEDTDYRIRFSSLC
FFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEIQLEPNNFPKKPKLDL
QNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEEKADVLSSFLDEKTHE
LLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIRQKFPFLVTVGKNSEI
VVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKDHRKAVHHFVNKKFGN
LVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKVIYTAFTLRKENLEMF
EAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNVFNI
RSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFG
KGRKVHTDQIGLALLKNEMDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLP
HSMRIFYVHAYTSKIWNEAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKVVLPVLGY
NIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHDI
DVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV

>gi568815586r:43695588_43904574|GENSCAN_predicted_CDS_2|2283_bp
atgagccaccgcacctggacagggtttgcttttatccctttgtctccctctggcttccaa
gctgacaggtacacttttttcccccatctgcgaatgtactcatctgatcccataagccgc
ctccactttctaattccctggaagcttggaggccggagaaacaagcgaattacaatcgtg
tggaggctcagcgagctgctggcgccacaggcatctgtcaggtgctggcctgacttcctg
gttctggggaaaagagacttcatttcgcagtcgggttcacggaatccagggcctgagagg
cactgttatagaagaatggaagaagatacagattatagaatcaggtttagttctttgtgt
ttctttaatgatcacgttggatttcatggcactataaaaagctcaccaagtgactttatt
gttattgaaattgatgaacagggacagttagttaataagaccatcgatgagcctattttc
aagattagtgaaatacaacttgagccaaataattttcccaaaaaaccaaaactagatctt
caaaatctgtccttagaagatggaagaaaccaagaagttcatactttgattaagtacact
gatggtgaccaaaatcatcagtctggttcagaaaaggaagatactatcgttgatggaact
tccaaatgtgaagaaaaagctgatgttttaagctcctttttggatgaaaaaactcatgag
ttactgaataattttgcctgtgatgtaagagagaagtggctttctaaaacagagctaatt
ggactacctcctgaattctcaataggcagaatccttgacaaaaaccagagggctagttta
cacagtgccattaggcagaaatttccatttttagtaactgtaggaaaaaacagtgaaatt
gttgtaaaaccaaatcttgaatataaagaactttgtcatttggtatctgaagaggaagca
tttgacttttttaaatatttggatgcaaagaaagaaaattccaaatttacctttaaacct
gatacaaacaaagaccacagaaaagctgtccaccattttgtcaacaaaaagtttggaaac
cttgtggaaaccaaatctttttctaaaatgaattgcagtgctggtaatccgaatgtggtg
gtaacagtaagatttcgggaaaaagcacacaaacgtgggaaaaggcctctttctgaatgc
caagaaggaaaagttatatatacagcttttaccctacgaaaggaaaacctggaaatgttt
gaagcgattggttttttagctatcaaacttggtgttattccttcggattttagttatgca
ggccttaaagacaagaaagccatcacctatcaagcaatggttgttagaaaagtgactcca
gagaggttgaaaaatattgaaaaagaaattgaaaagaaaagaatgaatgtctttaatatt
cggtctgtagatgattccctgagacttggtcagctcaaaggaaatcactttgatattgtc
attagaaatttaaaaaaacaaataaatgattctgcaaacctgagggagagaattatggaa
gcaatagaaaatgttaagaaaaaaggctttgtgaattactatggaccacagagatttggg
aagggaaggaaagttcacacagaccaaattggactagctttgctgaagaatgaaatggat
gctaaaggcacactttcattgatgcctgaattcaaagtgcgtgagagagcattgttggag
gcattgcaccgctttggcatgaccgaggaaggttgtatccaggcatggttctctttaccc
cattccatgcgcatattctatgttcacgcatataccagcaaaatttggaatgaggcagta
tcttacagacttgaaacctatggagcaagagtagtgcagggtgatttggtctgtttggat
gaagacattgatgacgagaatttcccaaatagtaaagtggttcttccagtacttggatac
aatattcagtacccgaagaacaaagtagggcagtggtaccatgacatacttagcagagat
ggactacagacatgtaggtttaaagtacctactctgaaactgaatataccaggttgctat
agacagattttgaaacatccctgtaatctctcataccaactaatggaagatcatgacatt
gatgtcaaaacgaaaggttcccacattgatgaaacagctttgtctcttttgatctctttt
gatcttgatgcttcatgctatgctaccgtttgtctgaaggaaataatgaagcatgacgtt
taa

>gi568815586r:43695588_43904574|GENSCAN_predicted_peptide_3|516_aa
MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALL
QTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITV
QQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNF
DERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMANA
NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGV
HQSQIPQVKSSVPKTAIPPDTSCKFRPPELLTNCLQVGVPMTSSVGIHSEKCVVRQFHCV
NLIECTYTNLDDMTYDIPGLYGIAPRLQTYAIQHNTLLNTVSNCNTLLDIKEEIEDEEKT
IEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKNQLNEDPYWKAFDAQEWVST
AILCGRTHGFRRARDFASASEFSCGQKENDGGQILW

>gi568815586r:43695588_43904574|GENSCAN_predicted_CDS_3|1551_bp
atgaacaaacccataacaccatcaacatatgtgcgctgcctcaatgttggactaattagg
aagctgtcagattttattgatcctcaagaaggatggaagaagttagctgtagctattaaa
aaaccatctggtgatgatagatacaatcagtttcacataaggagatttgaagcattactt
caaactggaaaaagtcccacttctgaattactgtttgactggggcaccacaaattgcaca
gttggtgatcttgtggatcttttgatccaaaatgaattttttgctcctgcgagtcttttg
ctcccagatgctgttcccaaaactgctaatacactaccttctaaagaagctataacagtt
cagcaaaaacagatgcctttctgtgacaaagacaggacattgatgacacctgtgcagaat
cttgaacaaagctatatgccacctgactcctcaagtccagaaaataaaagtttagaagtt
agtgatacacgttttcacagtttttcattttatgaattgaagaatgtcacaaataacttt
gatgaacgacccatttctgttggtggtaataaaatgggagagggaggatttggagttgta
tataaaggctacgtaaataacacaactgtggcagtgaagaagcttgcagcaatggttgac
attactactgaagaactgaaacagcagtttgatcaagaaataaaagtaatggcaaatgca
aatatcttactggatgaagcttttactgctaaaatatctgactttggccttgcacgggct
tctgagaagtttgcccagacagtcatgactagcagaattgtgggaacaacagcttatatg
gcaccagaagctttgcgtggagaaataacacccaaatctgatatttacagctttggtgtg
catcagagtcagatcccacaggttaagagctcagtccccaagactgccatcccaccagac
accagttgtaagtttaggcctccagaacttctgaccaactgccttcaagttggagttcct
atgacctcctctgtgggaatacattccgagaaatgtgttgttaggcagtttcattgtgtg
aacctcatagagtgtacttacacaaacctagatgatatgacctacgacatacctgggcta
tatggtattgctcctaggctacaaacgtatgctatacagcataatactctcctgaatact
gtaagcaattgtaacacactgctagatattaaagaagaaattgaagatgaagaaaagaca
attgaagattatattgataaaaagatgaatgatgctgattccacttcagttgaagctatg
tactctgttgctagtcaatgtctgcatgaaaagaaaaataagagaccagacattaagaag
aatcagctgaatgaagatccctactggaaggcatttgatgctcaggaatgggtcagtact
gccattttgtgtggtagaacccatggctttcgcagggcaagagattttgccagtgctagt
gagttttcctgtggccagaaagaaaatgatggaggccagatcctctggtga

>gi568815586r:43695588_43904574|GENSCAN_predicted_peptide_4|366_aa
MTRRGRRRSSHFLGPPAGAAGCTQRRSRELAAAAMSHQTGIQARSLLPSRCRLIRNSGER
RKLAFEAAWLKGACLPPSPTVAQLSPFWSRREELGQWRRLGLQYAVENQASFLFHASEDV
KEIFARARNGKYRLLKISIENEQLVIGSYSQPSDSWDKDYDSFVLPLLEDKQPCYILFRL
DSQNAQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHG
YKKYLLSQSSPAPLTAAEEELRQIKINEVQTDVGVDTKHQTLQGVAFPISREAFQALEKL
NNRQLNYVQLIEIDNGDELTADFLYEEVHPKQHAHKQSFAKPKGPAGKRGIRRLIRGPAE
TEATTD

>gi568815586r:43695588_43904574|GENSCAN_predicted_CDS_4|1101_bp
atgacgcgccggggccggcggaggagcagccacttcctggggccgccggccggggccgct
ggctgcactcagcgccggagccgggagctagcggccgccgccatgtcccaccagaccggc
atccaagcccggtccctgctgccgtcacgttgcagattgatccgaaattcgggggagcga
aggaaattggctttcgaggcggcctggttgaagggggcgtgccttccaccgtccccgaca
gtcgcccaactttcccccttttggtcacgtagggaagagctgggacagtggaggcgactg
gggcttcagtacgctgtcgagaaccaggcgagttttctttttcatgcaagtgaagatgtt
aaagagatctttgccagagccagaaatggaaagtacagacttctgaaaatatctattgaa
aatgagcaacttgtgattggatcatatagtcagccttcagattcctgggataaggattat
gattcctttgttttacccctgttggaggacaaacaaccatgctatatattattcaggtta
gattctcagaatgcccagggatatgaatggatattcattgcatggtctccagatcattct
catgttcgtcaaaaaatgttgtatgcagcaacaagagcaactctgaagaaggaatttgga
ggtggccacattaaagatgaagtatttggaacagtaaaggaagatgtatcattacatgga
tataaaaaatacttgctgtcacaatcttcccctgccccactgactgcagctgaggaagaa
ctacgacagattaaaatcaatgaggtacagactgacgtgggtgtggacactaagcatcaa
acactacaaggagtagcatttcccatttctcgagaagcctttcaggctttggaaaaattg
aataatagacagctcaactatgtgcagttgatcgagatagacaatggggatgagttgact
gcagacttcctttatgaagaagtacatcccaagcagcatgcacacaagcaaagttttgca
aaaccaaaaggtcctgcaggaaaaagaggaattcgaagactaattaggggcccagcggaa
actgaagctactactgattaa

>gi568815586r:43695588_43904574|GENSCAN_predicted_peptide_5|304_aa
MGKDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPR
GVGWRILKVLLWLLAILTGLIAGKFLFHQRLFGTPFFRGRFGVLELLNFVALFKKLILLL
CVPVMFSLLEQESKGGVEGEAQVGTGAAPGACGPARVPGGHGLGGPTLGAAGQPALDSEG
LSTRASSCGGCAGSPSSAGPPALRWISHGALAASLGGRAQDLQPAMPESPSLPPQWVPAR
PEPPRPAPPPASWHPVPPTAQGLRSAGTLRRDWQAALSAAPVRDPLGEASWASESSGDLE
NLYV

>gi568815586r:43695588_43904574|GENSCAN_predicted_CDS_5|915_bp
atgggtaaagactttcgttactatttccagcatccctggtctcgcatgattgtggcttac
ttggtgatcttctttaacttcttaatatttgcggaggacccagtttctcatagccaaaca
gaagccaatgttattgttgttggaaactgtttttcatttgttacaaataaataccctaga
ggagttggctggaggattttgaaggtgcttctatggctacttgccattctcacaggacta
atagctggcaaatttctgttccatcagcgtttgtttggaacacccttcttcagagggaga
tttggtgtgttggagctactgaactttgtagcccttttcaaaaagctgatcttattactt
tgtgttcctgttatgttctctctcctagagcaggaaagcaagggaggtgtggagggagag
gcacaggtgggaaccggggctgcgcccggcgcttgcgggccagctagagttccgggtggg
catgggcttggcggccccacactcggagctgccggccagccagccctggacagtgagggg
cttagcacccgggccagcagctgtggagggtgcgctgggtcccccagcagtgctggccca
ccagcgctgcgctggatttctcacggggctttagctgcctccctggggggcagggctcag
gacctgcagcctgccatgcctgagtctccctcactccccccgcagtgggttcctgcgcgg
cctgagcctccccgaccagcacctccccctgcttcatggcacccagtcccacccaccgcc
caagggctgaggagtgcaggcacactgcgcagggactggcaggcagctctatctgcagcc
ccagtgcgagatccactgggtgaagccagctgggcttctgagtctagtggggacttggag
aacctttatgtctag

>gi568815586r:43695588_43904574|GENSCAN_predicted_peptide_6|59_aa
MPFSQCRHLISGQVPLLQKTASTLTPTALMHLTAKAWMEKNSAEVTLMTAESSAEVVLI

>gi568815586r:43695588_43904574|GENSCAN_predicted_CDS_6|180_bp
atgcccttcagccagtgcagacatttgatctcaggacaggtgcccctgctgcagaagacc
gccagcaccctgactccaacagctctgatgcatctcactgccaaggcctggatggaaaaa
aattcagcagaagttacacttatgacggcagaaagttcagcagaagttgtacttatttag