GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:28:46

Sequence gi568815586r:1492874_1694066 : 201193 bp : 47.30% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    692    731   40                              -2.06
 1.01 Init +   3130   3206   77  0  2   83   76    47 0.490   3.56
 1.02 Intr +   7263   7419  157  0  1   80   66    59 0.237   2.91
 1.03 Intr +  12283  12417  135  0  0   77   38    59 0.038   0.56
 1.04 Term +  24003  24068   66  2  0  132   42    43 0.218   2.04
 1.05 PlyA +  24751  24756    6                               1.05

 2.09 PlyA -  26705  26700    6                               1.05
 2.08 Term -  32123  32013  111  2  0   80   43    80 0.651   1.26
 2.07 Intr -  36621  36563   59  1  2   79   80    47 0.790   1.60
 2.06 Intr -  38202  37505  698  2  2   62   10   180 0.421  -1.27
 2.05 Intr -  38714  38458  257  2  2   93   70   183 0.746  13.24
 2.04 Intr -  40620  40579   42  0  0   37  105    53 0.411   0.34
 2.03 Intr -  53676  53510  167  1  2   85   33    72 0.118   1.08
 2.02 Intr -  54384  54308   77  2  2   81  115    22 0.366   3.36
 2.01 Init -  78056  77875  182  2  2   60   31   129 0.132   2.21
 2.00 Prom -  80138  80099   40                              -1.06

 3.05 PlyA -  82014  82009    6                               1.05
 3.04 Term -  91863  91725  139  2  1   71   37   115 0.279   2.14
 3.03 Intr - 101217  99995 1223  0  2   82   94  1904 0.109 177.70
 3.02 Intr - 102078 101817  262  2  1  112  -24   191 0.179   7.79
 3.01 Init - 124136 124054   83  2  2   56   80   103 0.191   6.74
 3.00 Prom - 135460 135421   40                              -2.26

 4.00 Prom + 135726 135765   40                              -7.76
 4.01 Init + 138482 138561   80  1  2   95   89   190 0.995  18.33
 4.02 Intr + 139785 140032  248  0  2   96   82   181 0.998  15.40
 4.03 Intr + 146811 147103  293  1  2   54   98   654 0.999  59.85
 4.04 Term + 152921 153379  459  1  0  128   41   933 0.997  87.69
 4.05 PlyA + 153435 153440    6                              -3.94

 5.06 PlyA - 153527 153522    6                              -3.24
 5.05 Term - 153903 153779  125  1  2    7   49   119 0.093  -1.55
 5.04 Intr - 154841 154679  163  2  1  139   62    79 0.201   9.95
 5.03 Intr - 159938 159854   85  1  1   78   88    12 0.031   0.02
 5.02 Intr - 198666 198536  131  0  2   25   30   126 0.145  -0.01
 5.01 Intr - 198891 198808   84  0  0   47  100    66 0.325   3.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:1492874_1694066|GENSCAN_predicted_peptide_1|144_aa
MDKVCSAQEANSNGRQPEGQGSQDLRAPVPGTQPRNKDFRATVPRPPPRLPQQPGPGLEV
SSKPQDTGSDPRRAGQVQVCISHCTVRDSSDQTSPGQPAPTLPPPATRTRVDGGGQHRQA
VPEVFGHHHSTFCISEFDYSEYLI

>gi568815586r:1492874_1694066|GENSCAN_predicted_CDS_1|435_bp
atggacaaggtctgcagtgcccaagaggccaactccaatggcaggcagcccgagggccag
gggtcccaggatttacgtgctcccgtgccgggaacacaacccaggaacaaggacttccgt
gcgacggtgccccggccaccaccacgcctcccgcagcagccaggcccgggccttgaggtc
agcagtaaaccccaggacacaggcagtgaccctagacgagcagggcaggtccaggtttgc
atcagtcactgcactgtcagggactctagtgaccaaacaagcccgggccagccggccccc
accttgccacctcccgccactcgcacccgtgtggacggaggcggccagcatcggcaggct
gtgcctgaggtcttcggccaccaccattctactttctgtatctctgagtttgactactct
gagtacctcatataa

>gi568815586r:1492874_1694066|GENSCAN_predicted_peptide_2|530_aa
MELHYMATLGSLVYTITAPPIMTTPPGRTTKGKKIKRGRGELLPLGLDGHVIKDSFIDYS
VVQGLCEGDWRIYWFVETKASITTVTGLPLLQLPVPVGAVRAGDPVENKPSSMSVTLQVC
GNGCSVQDTLTRIPSFDPHSASITVKTLNRNQPRLPGRAGSPQTELPLPAVCSKYPGVRL
RLERGLRVHRGSKKVKEEVSSRLSHGGDVERRSDRRSTKPSGARALPARSGQKRRLPPAS
GGPTRRTPSAAAGPGRRRSRARFGSRGGGGGGGAVPGGEGRRLPACPAACQARGLRAPLG
PARLFLRPAALGRRARRGPRGRRGRPAGPGADPARSSQRAGRSGRRLRLFIRGRGAGLAA
RAGVLGSRGPAEASRAPPPMLGQPPRCPPEPGQAAPALGVCAPSCRPEGSLLRAGDPRTQ
RAGTVGGAQPAADPEGGPGPEARAREAAVDLAGLRALLRSAGPGEVSAQVGCGAGNLIAP
LGELPKRVSKEVKWNEAVEGVTKNWQNLETLANCNGKSFIISSVPLVKVP

>gi568815586r:1492874_1694066|GENSCAN_predicted_CDS_2|1593_bp
atggagctgcattacatggcgacactaggcagcttggtctacaccatcactgctcctccc
atcatgaccacaccacctgggaggaccaccaaagggaaaaagatcaagagaggccgagga
gaattactaccgcttggtctcgatggtcacgtcatcaaagattcattcattgactattca
gttgttcagggtctctgtgagggagactggagaatttactggtttgtggaaacaaaagct
tccatcacgactgtaacaggcctcccgcttctccagctgcccgtcccagtaggggcagtc
agggcgggtgacccggtggaaaataaacctagcagcatgtccgtgacgcttcaggtttgt
gggaatgggtgcagcgttcaagacactctcacgcgtatcccttcgtttgatcctcacagc
gcctcaataacggtgaagacgctcaacagaaaccagccaaggctgcccggccgggcaggc
tccccgcaaaccgaactgcctctcccagcggtctgcagcaaatacccgggggttcggctc
cgactggagcgcgggctacgcgtccaccgaggctccaagaaagtgaaggaggaggtctcg
tcccgcctctcccacggcggggacgtggagcgccggagcgaccggagaagcacaaagccg
agcggcgctcgggctctacctgcgcggtccgggcagaaacgcaggctcccacccgcgtcc
ggcggacccacccggcggacacccagcgcggccgcggggccgggaaggcggaggagccgc
gcgaggttcggcagccggggcggcggcggcggcggcggggccgtccccgggggcgagggc
cggcgcttacctgcatgtcccgccgcgtgtcaggcccgcgggctccgggcgccgctcggc
ccggcccggctcttcctgcgcccggctgcgctgggtcggcgggcgaggcgcggcccgcgg
gggcgcagggggcggccggcggggcccggggcagaccctgcccgctcctctcagcgcgcg
ggccgctcgggccgccgcctccgactcttcatccgcggccggggcgcggggctggcggcg
cgggcgggcgtgctcggctcccggggtcccgccgaggcgtctcgggccccccccccgatg
ctggggcagcctccgaggtgtccaccggagcccggccaggcagccccggcgctcggagtc
tgcgcgccctcctgccgcccggagggctccctgctccgcgccggggacccccgaactcag
cgggcggggacggtcgggggcgcgcagcctgcggccgatccggagggaggccctgggccc
gaggcgcgggctcgggaggccgccgtcgatctcgccgggctgcgcgccctgctccggagc
gcgggacccggggaagtttcggcccaagttggctgcggggcgggtaacctcatagcacct
ctgggtgagctgcccaagagggtgtccaaggaggtgaagtggaatgaagcagttgaaggt
gtcactaaaaactggcaaaatctggagactctagccaattgcaatgggaagagtttcatc
atttcatcagtaccactcgtcaaggtcccataa

>gi568815586r:1492874_1694066|GENSCAN_predicted_peptide_3|568_aa
MNGTAEGQHPWVHSTFNGEPQSLSSSVRVKNQGPRDQAELGFQGNGSTVPAAQARTIARA
RGSGSGGGDALQGGGAGAGPGATKRTARLLARGLRRAALRPDGRGVLGAGAGSSQRRGGG
RRKMETHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRA
NPSLFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIG
SLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLR
SCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSF
CGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSL
AYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQ
LTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKVRCTEFSQFSGICKSRMVK
FCGPLNFIQLTADGCTKQKRSSSFQSLE

>gi568815586r:1492874_1694066|GENSCAN_predicted_CDS_3|1707_bp
atgaatggaacagcggaaggacagcacccctgggtccacagcaccttcaacggcgagccc
cagagcctgtcttcatcagtcagggttaaaaatcaggggccacgggaccaggccgaactc
ggtttccagggcaacggctccacagttccggcagcgcaggcccgtaccattgcgcgggcg
cgggggagcgggagcggcggaggggacgcgctgcagggcggcggagccggggccggcccg
ggcgctaccaaacgcacggcccgcctgctcgcccggggtctgcgccgagccgcgctccgg
ccggacggccgcggcgtccttggtgcgggggccggcagctcccaacgccgcggagggggg
aggaggaagatggagacccacatctcatgcctgttcccggagctgctggccatgatcttc
ggctacctggacgtccgggacaaggggcgcgcggcgcaggtgtgcaccgcctggcgggac
gccgcctaccacaagtcggtgtggcggggggtggaggccaagctgcacctgcgccgggcc
aacccgtcgctgttccccagcctgcaggcccggggcatccgccgggtgcagatcctgagc
ctccgccgcagcctcagctacgtgatccagggcatggccaacatcgagagcctcaacctc
agcggctgctacaacctcaccgacaacgggctgggccacgcgtttgtgcaggagatcggc
tccctgcgcgctctcaacctgagcctctgcaagcagatcactgacagcagcctgggccgc
atagcccagtacctcaagggcctggaggtgctggagctgggaggttgcagcaacatcacc
aacactggccttctgctcatcgcctggggtctgcagcgcctcaagagccttaacctccgc
agctgccgccacctttcggatgtgggcatcgggcacctggccggcatgacgcgcagcgcg
gcggagggctgcctgggcctggagcagctcacgctacaggactgccagaagctcacagat
ctttctctaaagcacatctcccgagggctgacgggcctgaggctcctcaacctcagcttc
tgtgggggaatctcggacgctggcctcctgcacctgtcgcacatgggcagcctgcgcagc
ctcaacctgcgctcctgtgacaacatcagtgacacgggcatcatgcatctggccatgggc
agcctgcgcctctcggggctggatgtttcgttctgtgacaaggtgggagaccagagtctg
gcttacatagcccaggggctggatggcctcaagtctctctccctctgctcctgccacatc
agtgatgatggcatcaaccgcatggtgcggcagatgcacgggctgcgcacgctcaacatt
ggacagtgtgtgcgcatcacggacaagggcctggagctgatcgctgagcacctgagccaa
ctcaccggcatagacctgtacggctgcacccgaatcaccaagcgcggcctggagcgcatc
acgcagctgccgtgcctcaaggtactcaacctgggactctggcagatgacggacagtgag
aaggtcagatgcacagaatttagccagttttcaggaatctgtaaaagcaggatggttaag
ttctgtggccccctgaacttcatccagctgacagctgacggttgtacgaagcagaaaagg
tcttcaagtttccagagcctggagtag

>gi568815586r:1492874_1694066|GENSCAN_predicted_peptide_4|359_aa
MPSLLLLFTAALLSSWAQLLTDANSWWSLALNPVQRPEMFIIGAQPVCSQLPGLSPGQRK
LCQLYQEHMAYIGEGAKTGIKECQHQFRQRRWNCSTADNASVFGRVMQIGSRETAFTHAV
SAAGVVNAISRACREGELSTCGCSRTARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDARE
REKNFAKGSEEQGRVLMNLQNNEAGRRAVYKMADVACKCHGVSGSCSLKTCWLQLAEFRK
VGDRLKEKYDSAAAMRVTRKGRLELVNSRFTQPTPEDLVYVDPSPDYCLRNESTGSLGTQ
GRLCNKTSEGMDGCELMCCGRGYNQFKSVQVERCHCKFHWCCFVRCKKCTEIVDQYICK

>gi568815586r:1492874_1694066|GENSCAN_predicted_CDS_4|1080_bp
atgcccagcctgctgctgctgttcacggctgctctgctgtccagctgggctcagcttctg
acagacgccaactcctggtggtcattagctttgaacccggtgcagagacccgagatgttt
atcatcggtgcccagcccgtgtgcagtcagcttcccgggctctcccctggccagaggaag
ctgtgccaattgtaccaggagcacatggcctacataggggagggagccaagactggcatc
aaggaatgccagcaccagttccggcagcggcggtggaattgcagcacagcggacaacgca
tctgtctttgggagagtcatgcagataggcagccgagagaccgccttcacccacgcggtg
agcgccgcgggcgtggtcaacgccatcagccgggcctgccgcgagggcgagctctccacc
tgcggctgcagccggacggcgcggcccaaggacctgccccgggactggctgtggggcggc
tgtggggacaacgtggagtacggctaccgcttcgccaaggagtttgtggatgcccgggag
cgagagaagaactttgccaaaggatcagaggagcagggccgggtgctcatgaacctgcaa
aacaacgaggccggtcgcagggctgtgtataagatggcagacgtagcctgcaaatgccac
ggcgtctcggggtcctgcagcctcaagacctgctggctgcagctggccgagttccgcaag
gtcggggaccggctgaaggagaagtacgacagcgcggccgccatgcgcgtcacccgcaag
ggccggctggagctggtcaacagccgcttcacccagcccaccccggaggacctggtctat
gtggaccccagccccgactactgcctgcgcaacgagagcacgggctccctgggcacgcag
ggccgcctctgcaacaagacctcggagggcatggatggctgtgagctcatgtgctgcggg
cgtggctacaaccagttcaagagcgtgcaggtggagcgctgccactgcaagttccactgg
tgctgcttcgtcaggtgtaagaagtgcacggagatcgtggaccagtacatctgtaaatag

>gi568815586r:1492874_1694066|GENSCAN_predicted_peptide_5|195_aa
KKRTLTDGGLGKQDSRYQAGCLTRHLKKGAGATAPEGEQRAAGSDPPPRKARRGEQRAPD
SSDSGRKEGGSRRVLPVIAFKVYMAFAVKTKRTKEGQPQGDNNISLPGSSSSALPSWPQI
LESKIADSNTEETAKGIPITRALTGTQGTSQGSLDAAQVHVDERVREHQASYGTHLHSGQ
DPEDIEVEAEFPPPS

>gi568815586r:1492874_1694066|GENSCAN_predicted_CDS_5|588_bp
aagaagcgaacactgacggacgggggcttgggaaaacaggactccaggtaccaagcaggc
tgcctgacgcgccacctgaaaaagggagctggagcaactgcacccgaaggtgagcagagg
gcagcaggctccgaccctccgccgcgaaaggcgaggcgaggggaacagcgggcgccggac
tcctccgacagcggtcgcaaggagggcggctccagacgtgtcctgcctgtcatagcattc
aaggtctatatggcttttgctgtcaaaacaaaaaggacaaaagaaggccagccacagggc
gataataacatctcccttcctggatcctcaagctcagccttaccctcctggccccagata
ctggagtccaaaattgcagacagcaacacagaggagacggcaaagggcatccccattacc
cgtgctttaacagggacccagggaacaagccagggttcgcttgatgccgcacaagtgcac
gtggatgaaagagtaagagagcaccaggcctcttacggaacccatctacattctggacaa
gaccctgaagacatcgaggttgaagctgagttcccgccaccttcatag