GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:40:37

Sequence gi568815586r:122703284_122816737 : 113454 bp : 45.02% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    833    828    6                               1.05
 1.02 Term -   2281   2202   80  2  2   26   34   121 0.098  -1.57
 1.01 Init -  13454  12407 1048  2  1   57  105  1279 0.828 120.79
 1.00 Prom -  15163  15124   40                              -6.86

 2.02 PlyA -  15552  15547    6                               1.05
 2.01 Sngl -  27056  26016 1041  2  0   83   47   809 0.994  73.44
 2.00 Prom -  44595  44556   40                              -6.16

 3.00 Prom +  44772  44811   40                              -0.16
 3.01 Init +  49268  49309   42  1  0   68   85     7 0.477  -1.17
 3.02 Intr +  50410  50534  125  0  2   92   -4   129 0.014   3.48
 3.03 Intr +  58904  58923   20  2  2   77  107    19 0.024  -1.05
 3.04 Intr +  62021  62104   84  0  0   58   94    73 0.919   4.69
 3.05 Intr +  65559  65638   80  1  2   30  105    52 0.382   0.37
 3.06 Term +  65751  65795   45  2  0   73   38   109 0.935   1.61
 3.07 PlyA +  66134  66139    6                               1.05

 4.00 Prom +  68532  68571   40                              -1.96
 4.01 Init +  71388  71423   36  2  0   35  115    50 0.443   0.47
 4.02 Intr +  74208  74400  193  2  1   60   77   213 0.717  16.47
 4.03 Intr +  77881  77927   47  2  2   47   93    -7 0.215  -6.17
 4.04 Intr +  82436  82537  102  1  0   75   84    43 0.719   2.97
 4.05 Intr +  85475  85646  172  1  1   75  116   147 0.951  15.72
 4.06 Intr +  88737  88838  102  1  0   17   58   118 0.036   1.85
 4.07 Intr +  94024  94112   89  2  2   39   91    18 0.008  -3.11
 4.08 Intr +  94802  94917  116  1  2   38   89    76 0.013   1.95
 4.09 Intr +  97841  98569  729  2  0   47  113   282 0.019  17.15
 4.10 Intr + 102868 103012  145  1  1   50   83    34 0.233  -0.62
 4.11 Intr + 110011 110136  126  0  0   70   22   168 0.129   9.28

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  50410  50538  129  0  0   92   42   118 0.949   5.78
S.002 Term +  88737  88867  131  1  2   17   37   159 0.895   2.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:122703284_122816737|GENSCAN_predicted_peptide_1|375_aa
MNRHHLQDHFLEIDKKNCCVFRDDFIAKVLPPVLGLEFIFGLLGNGLALWIFCFHLKSWK
SSRIFLFNLAVADFLLIICLPFVMDYYVRRSDWKFGDIPCRLVLFMFAMNRQGSIIFLTV
VAVDRYFRVVHPHHALNKISNWTAAIISCLLWGITVGLTVHLLKKKLLIQNGTANVCISF
SICHTFRWHEAMFLLEFFLPLGIILFCSARIIWSLRQRQMDRHAKIKRAITFIMVVAIVF
VICFLPSVVVRIHIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPS
FPNFFSTLINRCLQRKITGEPDNNRSTSVELTGDPNKTRGAPEALIANSGATIIFFIIVF
ISPGSSSSTCSSMGI

>gi568815586r:122703284_122816737|GENSCAN_predicted_CDS_1|1128_bp
atgaatcggcaccatctgcaggatcactttctggaaatagacaagaagaactgctgtgtg
ttccgagatgacttcattgccaaggtgttgccgccggtgttggggctggagtttatcttt
gggcttctgggcaatggccttgccctgtggattttctgtttccacctcaagtcctggaaa
tccagccggattttcctgttcaacctggcagtagctgactttctactgatcatctgcctg
ccgttcgtgatggactactatgtgcggcgttcagactggaagtttggggacatcccttgc
cggctggtgctcttcatgtttgccatgaaccgccagggcagcatcatattcctcacggtg
gtggcggtagacaggtatttccgggtggtccatccccaccacgccctgaacaagatctcc
aattggacagcagccatcatctcttgccttctgtggggcatcactgttggcctaacagtc
cacctcctgaagaagaagttgctgatccagaatggcactgcaaatgtgtgcatcagcttc
agcatctgccataccttccggtggcacgaagctatgttcctcctggagttcttcctgccc
ctgggcatcatcctgttctgctcagccagaattatctggagcctgcggcagagacaaatg
gaccggcatgccaagatcaagagagccatcaccttcatcatggtggtggccatcgtcttt
gtcatctgcttccttcccagcgtggttgtgcggatccacatcttctggctcctgcacact
tcgggcacgcagaattgtgaagtgtaccgctcggtggacctggcgttctttatcactctc
agcttcacctacatgaacagcatgctggaccccgtggtgtactacttctccagcccatcc
tttcccaacttcttctccactttgatcaaccgctgcctccagaggaagataacaggtgag
ccagataataaccgcagcacgagcgtcgagctcacaggggaccccaacaaaaccagaggc
gctccagaggcgttaatcgccaactccggtgccaccatcatcttcttcatcatcgtcttc
atctcacctggatcatcatcaagtacttgtagttctatgggaatctaa

>gi568815586r:122703284_122816737|GENSCAN_predicted_peptide_2|346_aa
MYNGSCCRIEGDTISQVMPPLLIVAFVLGALGNGVALCGFCFHMKTWKPSTVYLFNLAVA
DFLLMICLPFRTDYYLRRRHWAFGDIPCRVGLFTLAMNRAGSIVFLTVVAADRYFKVVHP
HHAVNTISTRVAAGIVCTLWALVILGTVYLLLENHLCVQETAVSCESFIMESANGWHDIM
FQLEFFMPLGIILFCSFKIVWSLRRRQQLARQARMKKATRFIMVVAIVFITCYLPSVSAR
LYFLWTVPSSACDPSVHGALHITLSFTYMNSMLDPLVYYFSSPSFPKFYNKLKICSLKPK
QPGHSKTQRPEEMPISNLGRRSCISVANSFQSQSDGQWDPHIVEWH

>gi568815586r:122703284_122816737|GENSCAN_predicted_CDS_2|1041_bp
atgtacaacgggtcgtgctgccgcatcgagggggacaccatctcccaggtgatgccgccg
ctgctcattgtggcctttgtgctgggcgcactaggcaatggggtcgccctgtgtggtttc
tgcttccacatgaagacctggaagcccagcactgtttaccttttcaatttggccgtggct
gatttcctccttatgatctgcctgccttttcggacagactattacctcagacgtagacac
tgggcttttggggacattccctgccgagtggggctcttcacgttggccatgaacagggcc
gggagcatcgtgttccttacggtggtggctgcggacaggtatttcaaagtggtccacccc
caccacgcggtgaacactatctccacccgggtggcggctggcatcgtctgcaccctgtgg
gccctggtcatcctgggaacagtgtatcttttgctggagaaccatctctgcgtgcaagag
acggccgtctcctgtgagagcttcatcatggagtcggccaatggctggcatgacatcatg
ttccagctggagttctttatgcccctcggcatcatcttattttgctccttcaagattgtt
tggagcctgaggcggaggcagcagctggccagacaggctcggatgaagaaggcgacccgg
ttcatcatggtggtggcaattgtgttcatcacatgctacctgcccagcgtgtctgctaga
ctctatttcctctggacggtgccctcgagtgcctgcgatccctctgtccatggggccctg
cacataaccctcagcttcacctacatgaacagcatgctggatcccctggtgtattatttt
tcaagcccctcctttcccaaattctacaacaagctcaaaatctgcagtctgaaacccaag
cagccaggacactcaaaaacacaaaggccggaagagatgccaatttcgaacctcggtcgc
aggagttgcatcagtgtggcaaatagtttccaaagccagtctgatgggcaatgggatccc
cacattgttgagtggcactga

>gi568815586r:122703284_122816737|GENSCAN_predicted_peptide_3|131_aa
MILGLINRESFVTQVCEMAADISESSGADCKGDPRNSAKLDADYPLRVLYCGGKCCLFIT
NRENSPKQEAGISEGQGTAGEEEEKKKQKRVTGEDEIIIQGDFTDDIIDVIQEKWPEVDD
DSIEDLGEVKK

>gi568815586r:122703284_122816737|GENSCAN_predicted_CDS_3|396_bp
atgatcctcggactcattaatagggagtcatttgtgactcaggtttgtgaaatggctgct
gacatttctgaatccagcggggctgactgcaaaggagacccaaggaacagtgccaagtta
gatgccgattacccacttcgagtcctttattgtggaggcaagtgttgtctgttcattacc
aacagagaaaattcacccaaacaagaagctggaattagtgagggtcaaggaacagcaggg
gaagaagaggagaagaaaaaacagaagagagtaacaggggaggatgaaattatcattcag
ggagattttacagatgacataattgatgtcattcaggaaaaatggccagaggtagatgat
gacagcatcgaagatcttggagaagtaaagaagtga

>gi568815586r:122703284_122816737|GENSCAN_predicted_peptide_4|619_aa
MNPPAAFLAGRQNIGSEVEISTIEKQRKELQLLIGELKDRDKELNDMVAVHQQQLLSWEE
DRQKVLTLEERCSKLEGELHKRTEIIRSLTKKARNETLSNTLVELSAQVGQLQAREQALT
TMIKLKDKDIIEAVNHIADCSGKFKMLEHALRDAKMAETCIVKEKQDYKQKLKALKIEVN
KLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELLFTVEREKRKDELLNIAKSKQERTNS
ELHNLRQIYVKQQSDLQFLNFNVENSQELIQMYDSKMEESKALDSSRDMCLSDLENNHPK
VDIKREKNQKSLFKDQKFEAMLVQQNRSDKSSCDECKEKKQQIDTVFGEKSVITLSSIFT
KDLVEKHNLPWSLGGKTQIEPENKITLCKIHTKSPKCHGTGVQNEGKQPSETPTLSDEKQ
WHDVSVYLGLTNCPSSKHPEKLDVECQDQMERSEISCCQKNEACLGESGMCDSKCCHPSN
FIIEAPGHMSDVEWMSIFKPSKMQRIVRLKSGCTCSESICGTQHDSPASELIAIQDSHSL
GSSKSALREDETESSSNKKNSPTSLLIYKDAPAFNEKDDFSPTSKLQRLLAESRQMVTDL
ELSTLLPISHENLTGSATN

>gi568815586r:122703284_122816737|GENSCAN_predicted_CDS_4|1857_bp
atgaaccctccggcagccttccttgccgggcgccagaacatcgggtcagaagttgagatt
tccactatcgagaaacaacggaaggagctgcagttgctcattggagaattaaaagatcga
gataaagagctcaatgacatggttgcagtgcaccagcaacagcttctttcatgggaagag
gatcggcagaaagtgttgacactggaagaacgttgcagcaaattagaaggtgaactacat
aaaagaactgaaataatcaggtcactcacgaagaaggctagaaacgaaactctcagcaac
acgttagtggaactttctgcccaggtaggacagctacaagctcgagaacaagctcttacg
acaatgataaagctaaaggacaaagatattattgaggcagttaatcacattgcagattgt
tcgggtaaatttaaaatgctagagcatgccctacgtgatgccaagatggcggagacttgt
attgtgaaagaaaagcaagattataagcagaaattgaaggcacttaagattgaagtcaac
aaactaaaagaggacctcaatgaaaagacgacagaaaataatgagcaacgagaagagatc
attcgcctcaagcaagagaaaagttgcctgcacgatgaattgctttttactgtagagaga
gaaaagaggaaagatgaattgcttaatattgcgaagtcaaagcaagaacgcacaaattca
gaactgcacaatctgagacagatttatgtaaaacaacagagtgatctgcagtttcttaat
ttcaatgtggaaaattctcaggaattaatacagatgtatgactcaaagatggaggaatca
aaggctctggactccagcagagacatgtgtttatcagaccttgaaaataaccacccaaaa
gtcgatattaagagggaaaaaaatcagaagtcactgtttaaggaccagaaatttgaagcc
atgttggttcagcaaaataggtcagacaagagctcttgcgatgaatgcaaagagaagaaa
caacagatcgatactgtgtttggggagaaaagtgtaattacgctgtcatccatattcacc
aaagacttagtagagaaacacaacctcccttggtctctgggaggaaaaacccagattgaa
cccgaaaacaaaattacattgtgcaagatccacacaaaatcaccaaaatgtcatggcact
ggggttcagaacgaaggaaaacaaccctcagaaacacccactttatctgatgagaagcag
tggcatgatgtcagtgtttacctgggcctgaccaactgtccaagttcaaaacatccagaa
aagctggatgtagaatgtcaagatcagatggaaaggtccgaaatctcatgctgccagaaa
aatgaagcctgtctgggcgaaagtggcatgtgtgactccaagtgctgccacccgagtaac
ttcataattgaagccccaggccacatgtctgacgtggagtggatgagtattttcaagcct
tccaaaatgcagagaattgtccgcctcaaatctgggtgcacctgttcagaaagcatctgt
ggcacacaacatgactccccggcaagtgagctaattgccatccaagattcccactctttg
ggttcttcaaaatctgccttgagagaagatgagacggagtcctcttccaataaaaagaac
tcacctacgagtttgttaatctacaaagatgcaccagcattcaatgaaaaggatgatttc
tcgcccacgagcaagctccagcgtttgctggcggaatctcgtcagatggtgacggacctg
gagctgagcacactgctgcccatcagccatgagaatctcactggcagtgccacaaat