GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:17:35

Sequence gi568815586r:112305227_112508656 : 203430 bp : 42.84% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   1008    838  171  0  0   70  103    94 0.978   8.32
 1.06 Intr -   3665   3527  139  1  1   87   97   110 0.988  11.35
 1.05 Intr -  14516  13999  518  2  2  104  110   605 0.993  55.13
 1.04 Intr -  33111  32811  301  2  1   46   37   201 0.206   6.61
 1.03 Intr -  47987  47849  139  0  1   48   55    89 0.008   0.20
 1.02 Intr -  56503  56356  148  1  1   27   61    81 0.001  -1.81
 1.01 Init -  76902  76726  177  0  0  100   83   449 0.511  42.91
 1.00 Prom -  88347  88308   40                              -6.75

 2.09 PlyA -  92959  92954    6                               1.05
 2.08 Term - 100150  99998  153  1  0   88   36   193 0.999  11.04
 2.07 Intr - 100811 100627  185  0  2  104  107   291 0.999  31.19
 2.06 Intr - 101116 101068   49  1  1   85   99    28 0.998   0.93
 2.05 Intr - 101664 101521  144  0  0   56  100   167 0.998  14.26
 2.04 Intr - 103112 102936  177  2  0   97   93   212 0.553  21.79
 2.03 Intr - 103430 103194  237  2  0   26  116   315 0.767  24.99
 2.02 Intr - 104196 104093  104  1  2   56   68   153 0.737   9.07
 2.01 Init - 104454 104361   94  0  1   82  116   114 0.900  14.20
 2.00 Prom - 108512 108473   40                              -6.65

 3.03 PlyA - 108808 108803    6                               1.05
 3.02 Term - 109902 109848   55  2  1   89   49    38 0.351  -3.95
 3.01 Init - 113887 113502  386  1  2   40   64   321 0.741  19.41
 3.00 Prom - 115004 114965   40                              -5.55

 4.00 Prom + 125072 125111   40                              -9.45
 4.01 Init + 126322 126401   80  0  2   71   -5   123 0.332   1.88
 4.02 Intr + 141050 141172  123  2  0   83   97    92 0.989   8.38
 4.03 Intr + 145092 145286  195  0  0   43   86   282 0.990  21.11
 4.04 Intr + 147969 148161  193  0  1   49   99   229 0.999  18.67
 4.05 Intr + 149338 149454  117  0  0   49   99   157 0.999  12.64
 4.06 Intr + 150724 150837  114  0  0    7  107    97 0.898   3.22
 4.07 Intr + 167718 167814   97  2  1  142   95    61 0.998  10.86
 4.08 Intr + 172425 172504   80  1  2  123  103   102 0.999  13.55
 4.09 Intr + 172631 172789  159  1  0   36   94   142 0.988   8.86
 4.10 Intr + 176848 176979  132  0  0  101  108   154 0.986  18.62
 4.11 Intr + 181249 181403  155  0  2   59   61   221 0.999  14.45
 4.12 Intr + 183217 183284   68  1  2  118   98   100 0.923  11.63
 4.13 Intr + 183798 183949  152  1  2   93   81   239 0.984  22.66
 4.14 Intr + 196076 196108   33  1  0  130   98    -5 0.551   2.20
 4.15 Intr + 196918 197030  113  0  2   67   89    94 0.960   5.66
 4.16 Term + 199469 199538   70  2  1  127   54    67 0.882   3.63
 4.17 PlyA + 200431 200436    6                              -0.45

 5.02 PlyA - 200923 200918    6                               1.05
 5.01 Sngl - 202566 202315  252  0  0   65   35   188 0.822   6.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:112305227_112508656|GENSCAN_predicted_peptide_1|531_aa
MGSSAAAAAAAAAAADSAQWLSVKEETIFLHDGLIRVTDLAELPSEILGAPEAADTDLEG
PSGDPYEHRVSLVVKTVGFGIDTSRQLLVQFYHLSEFQFLGYKMPPFKELSRNIIRHSFN
LVMVAASQVAVSQLLGSYEILLLVSIELMFCFGLGYFFIPMQEWPNTYGERVFVDVESSV
FKWNHKCLHKTEAERDYTKKRLKLCGHKPGNAVGQQKLEEARNRFFTRAPGGSAALPTLR
FQPSDTDFRLLASRTILTFETKNPSELAERLRSVCGNQSNAYARLLEYRLNALRGLWNAQ
RQLALEEQHERESSGDEETLALLKRQGLLQQPEQAPFTSRMGLLLVFPLIQSQSRTDPSL
CNITAEVLLNCLRDCQPLSLTKEPADCLNGIETLLCSWLEETSDTGRHIPHKQKENAAAA
LVALACARGFVYCRNEELEPGWVAFGSGSLLHRPVSFDNKPHSLFQVIDQNTLQVCQVVP
MPANHLPIGSTMSTVHLSSDGTYFYWIWSPASLNEKTPKGHSVFMDIFELV

>gi568815586r:112305227_112508656|GENSCAN_predicted_CDS_1|1593_bp
atgggctcgtcggcggccgcggcggcggcggcggcggcggccgctgactcggcgcagtgg
ctctcggtgaaggaagagaccatcttcctgcacgacgggctgatccgggtcaccgacctg
gccgagctgcccagcgagatcctcggggccccagaggccgcggacaccgacctggagggt
ccttcaggggatccttatgaacacagagtgagcctagtggttaagactgtaggctttggc
attgacacatctcgccagctgttagttcagttctaccacctatcagaatttcaatttctt
ggttataaaatgccccccttcaaggagctgtcaagaaacatcatcagacatagttttaac
ctggtaatggtggctgccagtcaggtggctgtcagtcagctccttggttcttatgaaatt
cttctgctggtttccatagagttgatgttctgttttggtctggggtatttctttatacca
atgcaagaatggcctaacacatatggagaaagggtctttgtagatgtggaatcatcagta
tttaaatggaatcataagtgtctacataagacagaggcagagagagattacacaaagaag
agattaaagttatgtggccacaagccagggaatgctgttggccaacagaagctggaagaa
gcaagaaaccgattctttactagagcccctggagggagtgcagccctgccgacacttcga
tttcagcccagtgataccgatttcagacttctagcctccagaactattttaacctttgag
accaagaacccgtcggaattagcagaacgtttgcgctctgtttgtgggaatcagagcaat
gcctatgcccggctgctggaataccgcctgaatgccttgcgaggactgtggaatgcccag
cgccagctggccttagaagaacagcatgaaagggaaagttcaggtgatgaggaaactttg
gccctgctcaaacgccagggcttgttgcagcaacctgagcaagcgcccttcacatcgagg
atggggctcctgctggtcttcccccttattcagtcccagagtagaacagacccctctctc
tgtaacataactgctgaggtgctattgaactgccttcgtgactgccagcctttgagcttg
accaaggagcctgctgactgtctcaatggaattgaaactttgctgtgctcttggctagag
gagacttctgacacaggccgacacatcccacataagcaaaaagaaaatgctgctgctgcc
ctggtggctttggcttgtgccagaggttttgtgtactgccggaacgaggagttggaacca
ggatgggtggcttttggcagcggcagtcttctccaccggcctgtctctttcgataataaa
cctcactcccttttccaggtcattgaccagaacacccttcaggtgtgccaggtggtgcca
atgccagccaatcacctccccattggcagcaccatgagcactgtgcacctgtcttcagat
ggcacttacttctattggatctggtctcctgccagcctgaatgagaaaacaccgaaggga
cattctgtcttcatggacatttttgaacttgtg

>gi568815586r:112305227_112508656|GENSCAN_predicted_peptide_2|380_aa
MPQIRKEVRLALPMIAYRPEAGTLILFPILQGHKEGEVECRSGSLRFFATLLGWGNEALS
GTRSRLMAGEKVEKPDTKEKKPEAKKVDAGGKVKKGNLKAKKPKKGKPHCSRNPVLVRGI
GRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMVR
CGDCKLDFLFMLEYCEDVFEYLDTPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT
ILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKI
PKHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQ
GYLRSVFALTNGIYPHKLVF

>gi568815586r:112305227_112508656|GENSCAN_predicted_CDS_2|1143_bp
atgccccagatccggaaggaagtgagactcgcacttcccatgattgcttatagaccggaa
gccgggaccttaattctctttcccatcttgcaagggcacaaagagggtgaggtagaatgc
cgtagtggctccctccggttcttcgccactctcttgggctgggggaacgaggccctttcg
gggacccgtagcagactgatggcgggtgaaaaagttgagaagccagatactaaagagaag
aaacccgaagccaagaaggttgatgctggtggcaaggtgaaaaagggtaacctcaaagct
aaaaagcccaagaaggggaagccccattgcagccgcaaccctgtccttgtcagaggaatt
ggcaggtattcccgatctgccatgtattccagaaaggccatgtacaagaggaagtactca
gccgctaaatccaaggttgaaaagaaaaagaaggagaaggttctcgcaactgttacaaaa
ccagttggtggtgacaagaacggcggtacccgggtggttaaacttcgcaaaatggtaaga
tgtggggactgtaaattggattttctgtttatgcttgaatactgtgaagatgtttttgaa
tacttagatactcctagatattatcctactgaagatgtgcctcgaaagctgttgagccac
ggcaaaaaacccttcagtcagcacgtgagaaaactgcgagccagcattacccccgggacc
attctgatcatcctcactggacgccacaggggcaagagggtggttttcctgaagcagctg
gctagtggcttattacttgtgactggacctctggtcctcaatcgagttcctctacgaaga
acacaccagaaatttgtcattgccacttcaaccaaaatcgatatcagcaatgtaaaaatc
ccaaaacatcttactgatgcttacttcaagaagaagaagctgcggaagcccagacaccag
gaaggtgagatcttcgacacagaaaaagagaaatatgagattacggagcagcgcaagatt
gatcagaaagctgtggactcacaaattttaccaaaaatcaaagctattcctcagctccag
ggctacctgcgatctgtgtttgctctgacgaatggaatttatcctcacaaattggtgttc
taa

>gi568815586r:112305227_112508656|GENSCAN_predicted_peptide_3|146_aa
MFLPPSGSATDPLLAQAPLGSVTSGWPEGGPLGTGRGAEPAGRAQTPLQAWGSRRLCSCP
PARLAPPPPPPFAAVAPVMSPLATPAATSCFPSAEDRATAGNGSAGAPRRRHAQCPKHPC
FLLETAAARGFFLTVLHINSMPLISG

>gi568815586r:112305227_112508656|GENSCAN_predicted_CDS_3|441_bp
atgttcctcccgccctccggctccgcgacggacccgctccttgctcaggctccgctgggc
tcggtcacatcgggctggcccgagggaggcccgctcgggaccggacgcggggcagagcca
gccggccgcgcacagacccccctccaggcctggggatcccggagactgtgcagctgcccc
ccggcccggctcgctcctcctccgcccccgcccttcgccgccgtcgcccccgtgatgtca
ccgctcgcgacgcccgccgccacttcctgcttcccgtcagcggaggaccgagcgacggcc
gggaatggcagcgcgggggctccgcggaggcgccacgcacagtgtccaaagcatccttgc
ttcctcctggaaaccgcggccgccagagggttcttcctgactgtcctccacatcaactct
atgcctctgatctcaggctag

>gi568815586r:112305227_112508656|GENSCAN_predicted_peptide_4|626_aa
MGDLTVGPPEGKAHVKAACTNWRKSETWFHPNITGVEAENLLLTRGVDGSFLARPSKSNP
GDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIEL
KYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKG
ESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNT
TRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNR
YKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTV
NDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTL
RELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVH
CSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAV
QHYIETLQRRIEEEQGIIRTKNKVLKKSKRKGHEYTNIKYSLADQTSGDQSPLPPCTPTP
PCAEMREDSARVYENVGLMQQQKSFR

>gi568815586r:112305227_112508656|GENSCAN_predicted_CDS_4|1881_bp
atgggggatctgactgtgggaccaccagagggaaaagcacatgtaaaagctgcgtgtacc
aactggaggaaatcggagacatggtttcacccaaatatcactggtgtggaggcagaaaac
ctactgttgacaagaggagttgatggcagttttttggcaaggcctagtaaaagtaaccct
ggagacttcacactttccgttagaagaaatggagctgtcacccacatcaagattcagaac
actggtgattactatgacctgtatggaggggagaaatttgccactttggctgagttggtc
cagtattacatggaacatcacgggcaattaaaagagaagaatggagatgtcattgagctt
aaatatcctctgaactgtgcagatcctacctctgaaaggtggtttcatggacatctctct
gggaaagaagcagagaaattattaactgaaaaaggaaaacatggtagttttcttgtacga
gagagccagagccaccctggagattttgttctttctgtgcgcactggtgatgacaaaggg
gagagcaatgacggcaagtctaaagtgacccatgttatgattcgctgtcaggaactgaaa
tacgacgttggtggaggagaacggtttgattctttgacagatcttgtggaacattataag
aagaatcctatggtggaaacattgggtacagtactacaactcaagcagccccttaacacg
actcgtataaatgctgctgaaatagaaagcagagttcgagaactaagcaaattagctgag
accacagataaagtcaaacaaggcttttgggaagaatttgagacactacaacaacaggag
tgcaaacttctctacagccgaaaagagggtcaaaggcaagaaaacaaaaacaaaaataga
tataaaaacatcctgccctttgatcataccagggttgtcctacacgatggtgatcccaat
gagcctgtttcagattacatcaatgcaaatatcatcatgcctgaatttgaaaccaagtgc
aacaattcaaagcccaaaaagagttacattgccacacaaggctgcctgcaaaacacggtg
aatgacttttggcggatggtgttccaagaaaactcccgagtgattgtcatgacaacgaaa
gaagtggagagaggaaagagtaaatgtgtcaaatactggcctgatgagtatgctctaaaa
gaatatggcgtcatgcgtgttaggaacgtcaaagaaagcgccgctcatgactatacgcta
agagaacttaaactttcaaaggttggacaagggaatacggagagaacggtctggcaatac
cactttcggacctggccggaccacggcgtgcccagcgaccctgggggcgtgctggacttc
ctggaggaggtgcaccataagcaggagagcatcatggatgcagggccggtcgtggtgcac
tgcagtgctggaattggccggacagggacgttcattgtgattgatattcttattgacatc
atcagagagaaaggtgttgactgcgatattgacgttcccaaaaccatccagatggtgcgg
tctcagaggtcagggatggtccagacagaagcacagtaccgatttatctatatggcggtc
cagcattatattgaaacactacagcgcaggattgaagaagagcagggtatcatcagaacc
aaaaataaagttttaaagaaaagcaagaggaaagggcacgaatatacaaatattaagtat
tctctagcggaccagacgagtggagatcagagccctctcccgccttgtactccaacgcca
ccctgtgcagaaatgagagaagacagtgctagagtctatgaaaacgtgggcctgatgcaa
cagcagaaaagtttcagatga

>gi568815586r:112305227_112508656|GENSCAN_predicted_peptide_5|83_aa
MAAKLPQSLKGLRDLRKELPPGLDLGLPFRSQSQKNPRRPQLHGKDAIALLPSQKSTNDI
FIEISALDDSTYEAKRDVFGEGT

>gi568815586r:112305227_112508656|GENSCAN_predicted_CDS_5|252_bp
atggcagccaaactaccccaaagtctcaagggactgagagacctcagaaaggaactacca
ccagggctggatctaggccttcctttcagaagccaaagtcagaagaatccaaggaggcca
caacttcatggcaaagatgccatagcattattaccatcacaaaagtcaaccaatgatatt
ttcattgaaatatccgcactggatgattcaacatatgaggcaaagagggatgtctttgga
gaaggcacttaa