GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:22:18

Sequence gi568815586f:123484637_123696726 : 212090 bp : 46.79% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   1169    951  219  2  0   61   55   392 0.988  31.70
 1.06 Intr -  14129  13908  222  2  0   82   83   401 0.410  37.32
 1.05 Intr -  14900  14782  119  0  2   74   68   244 0.211  21.18
 1.04 Intr -  35391  35233  159  1  0   67   68   135 0.882   9.36
 1.03 Intr -  39009  38859  151  0  1  104  115   221 0.999  26.14
 1.02 Intr -  49216  48538  679  0  1  102   86   994 0.594  92.22
 1.01 Init -  60213  60155   59  0  2   38   84    51 0.070   0.48
 1.00 Prom -  63309  63270   40                              -4.86

 2.00 Prom +  64002  64041   40                              -5.36
 2.01 Init +  69904  69931   28  0  1   68   89    12 0.321  -0.93
 2.02 Intr +  71652  71847  196  1  1   79   56   148 0.933   9.17
 2.03 Term +  72522  72705  184  0  1   86   48   142 0.994   7.02
 2.04 PlyA +  74534  74539    6                               1.05

 3.00 Prom +  80398  80437   40                              -5.16
 3.01 Init + 100001 100180  180  1  0  107   64   490 0.904  45.68
 3.02 Intr + 102111 102303  193  2  1  108  100   115 0.980  13.77
 3.03 Intr + 105706 105813  108  2  0   62  100   136 0.890  12.46
 3.04 Intr + 107345 107445  101  0  2   39   93     0 0.037  -4.57
 3.05 Intr + 117408 117620  213  2  0   51   74   234 0.055  17.21
 3.06 Intr + 121295 121345   51  1  0   94  101    56 0.990   6.60
 3.07 Intr + 121392 121523  132  2  0  110   94    38 0.976   7.44
 3.08 Intr + 122796 122887   92  2  2   87   68   111 0.999   7.79
 3.09 Intr + 124044 124193  150  0  0   26   79   197 0.996  11.88
 3.10 Intr + 125213 125492  280  2  1   55  103   220 0.824  17.68
 3.11 Intr + 128534 128616   83  1  2  118   78    77 0.934   8.14
 3.12 Intr + 130549 130680  132  1  0   99   98   160 0.995  17.86
 3.13 Intr + 131875 131967   93  1  0   80   86    82 0.932   6.28
 3.14 Intr + 133122 133236  115  0  1   85   80   117 0.873  11.05
 3.15 Intr + 134045 134201  157  1  1   66  110   147 0.900  14.28
 3.16 Intr + 134796 135088  293  1  2   46   88   210 0.997  13.65
 3.17 Term + 135328 135504  177  0  0   56   37   240 0.999  13.39
 3.18 PlyA + 136282 136287    6                               1.05

 4.09 PlyA - 136410 136405    6                               1.05
 4.08 Term - 137386 137120  267  1  0   68   37   229 0.542  11.29
 4.07 Intr - 140226 140151   76  2  1   81  116    94 0.998  11.02
 4.06 Intr - 141857 141789   69  1  0   62  100    88 0.137   5.70
 4.05 Intr - 142520 142414  107  2  2   98  -24    72 0.111  -3.99
 4.04 Intr - 145649 145533  117  2  0  124  101    44 0.989   9.96
 4.03 Intr - 145897 145761  137  2  2   70   94    87 0.998   7.79
 4.02 Intr - 147810 147709  102  1  0   84   71   112 0.964   9.25
 4.01 Init - 148921 148909   13  1  1  102   61    26 0.792   1.74
 4.00 Prom - 151287 151248   40                              -4.56

 5.00 Prom + 156350 156389   40                              -5.26
 5.01 Init + 160849 160925   77  0  2   92   86     7 0.451   1.46
 5.02 Intr + 163327 163490  164  1  2   84   26   125 0.471   5.52
 5.03 Intr + 168071 168099   29  0  2  108   91    -6 0.395  -0.47
 5.04 Intr + 174880 174948   69  0  0   63   95    52 0.359   2.78
 5.05 Intr + 175159 175294  136  0  1  101  108   -29 0.343   0.54
 5.06 Term + 175559 175599   41  0  2   80   55    54 0.419  -1.35
 5.07 PlyA + 175678 175683    6                               1.05

 6.00 Prom + 186041 186080   40                              -1.66
 6.01 Init + 186605 186686   82  1  1   62   57    97 0.989   3.13
 6.02 Intr + 186871 186978  108  2  0   96   70   184 0.895  17.66
 6.03 Intr + 187420 187491   72  2  0  105   66    41 0.372   2.98
 6.04 Intr + 194553 194653  101  1  2   81   91    47 0.438   4.13
 6.05 Intr + 202200 202399  200  2  2  115   75     4 0.371  -0.05
 6.06 Intr + 203415 203541  127  0  1   67   89    92 0.852   7.88
 6.07 Intr + 205897 206038  142  0  1  116   87    28 0.974   5.43
 6.08 Intr + 210206 210340  135  0  0   99   88    -1 0.654   1.54
 6.09 Intr + 210584 210661   78  0  0   92  110     3 0.760   2.42
 6.10 Intr + 211779 211859   81  1  0   91   56    58 0.660   2.51

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 117513 117620  108  2  0  105   74   180 0.922  18.60
S.002 Init - 141850 141789   62  1  2   71  100    86 0.856   8.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:123484637_123696726|GENSCAN_predicted_peptide_1|536_aa
MFIDLGKLLNFSGPLQLPFLPAPPRGARPGSIERNSDPNLGGAAGLRTRAPSPLPPPPPP
PPPPTREQLRAEPGAQTPGPHTPRRRPCPRPRPPPAARCALAPAPAERARPRPRLGPAGP
ALDSGKFGSCTSLRGGGQARRVAMEEERGSALAAESALEKNVAELTVMDVYDIASLVGHE
FERVIDQHGCEAIARLMPKVVRVLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEK
ERKHQKELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGRLE
ALDPQGLDLRALSRFPVHQCTHARSALHPGNFASTAFQIPAGLVMNQPTRMSERERQVMK
KLKEVVDKQRDEIRAKDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIE
QKVELEADLQTKEQEMGSLRAELGKLRERLQGEHSQNGEEEPETEPVGEESISDAEKVAM
DLKDPNRPRFTLQELRDVLHERNELKSKVFLLQEELAYYKRQVSLGLDGPSWLLTE

>gi568815586f:123484637_123696726|GENSCAN_predicted_CDS_1|1608_bp
atgttcatcgacttgggcaagttacttaacttctccgggcctctgcagcttccttttctg
cccgcaccgccccgaggcgcccggcccggctccattgagcgcaactcggatcccaacttg
ggaggcgccgcgggcctgcgcacgcgcgcgccctccccgctgccgccgccgccgccgccg
ccgccgccgcccactcgggagcagctccgggccgagccgggcgcccagaccccgggcccg
cacaccccgcgccgccgcccgtgcccgcgcccgcgcccgccgcccgctgcccgctgcgcc
ctcgccccagcgcccgctgagcgcgcccgcccgcggcccaggctgggcccggccggcccg
gccctcgacagcggcaagtttgggagttgcacgagtttgcggggcgggggacaggccagg
agggtggccatggaggaggagcgggggtcggcgctggcggccgagtcggcgctggagaag
aacgtggccgagctgaccgtcatggacgtgtacgacatcgcgtcgcttgtgggccacgag
ttcgagcgggtcattgaccagcacggctgcgaggccatcgcgcgcctcatgcccaaggtc
gtgcgcgtcctggagatcctggaggtgctggtcagccgccaccacgtcgcgcccgagctg
gacgagctgcgcctggagctggaccgcctgcgcctggagaggatggaccgcatcgagaag
gagcgcaagcaccagaaggagctggagctggtggaggatgtgtggcgaggggaggcgcag
gacctcctctcccagatcgcccagctgcaggaggagaacaagcagctcatgaccaacctc
tcccacaaggatgtcaatttctcagaggaggagttccagaagcatgaagggcgcctggag
gccttggacccacagggcctggacctgagggctctgagccgcttccctgtgcatcagtgc
acgcatgctcgcagcgccctccacccagggaactttgcttccacagccttccagatccct
gctgggcttgtcatgaatcagcccacacgcatgtcagagcgggagcgacaggtgatgaag
aagctgaaggaggtggtggacaaacaacgcgacgagatccgcgccaaggacagggagctg
ggcctgaaaaatgaggacgttgaggctttacagcagcagcagacacggctgatgaagatc
aaccatgaccttcggcaccgggtcacggtggtggaggcccaggggaaagccctgatcgaa
cagaaggtggagctggaggcagacctgcagaccaaggagcaggagatgggcagcctgcga
gcagagctggggaagttgcgagagaggctgcagggggagcacagccagaatggggaggag
gagcctgagacggagccggtgggagaggagagcatctccgacgcagagaaggtggccatg
gatctcaaggaccccaaccgcccccggttcaccctgcaggagctgcgggacgtgctgcac
gagaggaacgagctcaagtccaaggtgttcttgctgcaggaggagctggcttactataag
aggcaagtgtccctggggctggatggcccgagctggctccttactgag

>gi568815586f:123484637_123696726|GENSCAN_predicted_peptide_2|135_aa
MTSKGEVCSDTSWKGRYPVILSTPTVVKVAGLESWIHHTRVKPWIVPEEPENPGDIASYS
CEPLEDLRLLFKRQPIEAVKLQMVLQMEPQMQSVTKIYHRPLDRPPSLCSDVDDIKGNHP
KEISTARPLLHPNSA

>gi568815586f:123484637_123696726|GENSCAN_predicted_CDS_2|408_bp
atgacttcgaaaggcgaggtatgcagtgatacatcctggaaaggacgctacccagtcatt
ttatctaccccaaccgtggttaaagtggctggattggaatcttggatacatcacactcga
gtcaaaccctggatagtgccagaggaacccgaaaatccaggagacattgctagctattcc
tgtgaacctctagaggatctgcgcctgctcttcaagagacaaccaatcgaagctgtaaaa
ctacaaatggttcttcaaatggagccccagatgcaatccgtgactaagatctaccacaga
cccctggaccggcctcctagcctatgctctgatgttgatgacatcaaaggcaaccatccc
aaggaaatatcaactgcacgacccctgctacaccccaattcagcatga

>gi568815586f:123484637_123696726|GENSCAN_predicted_peptide_3|849_aa
MVTLAELLVLLAALLATVSGYFVSIDAHAEECFFERVTSGTKMGLIFEVAEGGFLDIDVE
ITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQD
METEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRANVLSVFPTLKSVLATYGNKS
SGSRAQTSACVGRKRSSRPAAGAAGSGSARWGCTRRVRAAATDAAKERAMEHVTEGSWES
LPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAMNSEEERETKTLCLQVTG
SGKTLAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSGNI
IVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASLFEYLFSIVKHCV
LILLASERLSVSPLFISINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKE
KGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKAL
EVLVKGVKIMCIHGKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPS
NASAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKEMKPQRNTADLLPKLKSMA
LADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQF
PDFVPVDVNTDTIPFKDKIREKQRQKLLEQQRREKTENEGRRKFIKNKAWSKQKAKKEKK
KKMNEKRKREEGSDIEDEDMEELLNDTRLLKKLKKGKITEEEFEKGLLTTGKRTIKTVDL
GISDLEDDC

>gi568815586f:123484637_123696726|GENSCAN_predicted_CDS_3|2550_bp
atggtgacgcttgctgaactgctggtgcttctggccgctctcctggccacggtctcgggc
tatttcgttagcatcgacgcccatgctgaagagtgcttctttgagcgggtcacctcgggc
accaagatgggcctcatcttcgaggtggcggagggcggcttcctggacatcgacgtggag
attacaggaccagataacaaaggaatttacaaaggagacagagaatccagtgggaaatac
acatttgctgctcacatggatggaacatacaaattttgttttagtaaccggatgtccacc
atgactccaaaaatagtgatgttcaccattgatattggggaggctccaaaaggacaagat
atggaaacagaagctcaccagaacaagctagaagaaatgatcaatgagctagcagtggcg
atgacagctgtaaagcacgaacaggaatacatggaagtccgggagagaatacacagagcc
aatgtgctttctgtttttcctacccttaaatctgttcttgctacttatggaaacaaatct
tcaggatctagagcacagacatcagcttgtgttggcaggaagcgaagttcccggccggcc
gctggagctgcgggaagcggaagtgctcgttgggggtgcacaaggcgcgttcgagcagcg
gcgaccgacgcggcgaaggagcgcgccatggagcatgtgacagagggctcctgggagtcg
ctgcctgtgccgctgcacccgcaggtgctgggcgcgctgcgggagctgggcttcccgtac
atgacgccggtgcagtccgcaaccatccctctgttcatgcgaaacaaagatgtcgctgca
gaagcgatgaactctgaggaagaaagggaaaccaaaactctctgtttgcaggtcacaggt
agtggcaaaacactcgcttttgtcatccccatcctggaaattcttctgagaagagaagag
aagttaaaaaagagtcaggttggagccataatcatcacccccactcgagagctggccatt
caaatagacgaggtcctgtcgcatttcacgaagcacttccccgagttcagtgggaacatc
attgtggccactccaggccgcttggaggacatgttccggaggaaggccgaaggcttggat
ctggccagctgtgtgcgatccctggatgtcctggtgttggatgaggcagacagacttctg
gacatggggtttgaggcaagtctttttgaatacctgtttagtatcgtgaagcactgtgtg
ttgattctgctggcaagtgagcggttaagtgtgagccctctttttatcagcatcaacacc
attctggagtttttgccaaagcagaggagaacaggccttttctctgccactcagacgcag
gaagtggagaacctggtgagagcgggcctccggaaccctgtccgggtctcagtgaaggag
aagggcgtggcagccagcagtgcccagaagaccccctcccgcctggaaaactactacatg
gtatgcaaggcagatgagaaatttaatcagctggtccattttcttcgcaatcataagcag
gagaaacacctggtcttcttcagcacctgtgcctgtgtggaatactatgggaaggctctg
gaagtgctggtgaagggcgtgaagattatgtgcattcacggaaagatgaaatataaacgc
aataagatcttcatggagttccgcaaattgcaaagtgggattttagtgtgcactgatgtg
atggcccggggaattgatattcctgaagtcaactgggttttgcagtatgaccctcccagc
aatgcaagtgccttcgtgcatcgctgcggtcgcacagctcgcattggccacgggggcagc
gctctggtgttcctcctgcccatggaagagtcatacatcaatttccttgcaattaaccaa
aaagagatgaagccccagagaaacacagcggaccttctgccaaaactcaagtccatggcc
ctggctgacagagctgtgtttgaaaagggcatgaaagcttttgtgtcatatgtccaagct
tatgcaaagcatgaatgcaacctgattttcagattaaaggatcttgattttgccagcctt
gctcgaggttttgccctgctgaggatgcccaagatgccagaattgagaggaaagcagttt
ccagattttgtgcccgtggacgttaataccgacacgattccatttaaagataaaatcaga
gaaaagcagaggcagaaactcctggagcaacaaagaagagagaaaacagaaaatgaaggg
agaagaaaattcataaaaaataaagcttggtcaaagcagaaggccaaaaaagaaaagaag
aaaaaaatgaatgagaaaaggaaaagggaagagggttctgatattgaagatgaggacatg
gaagaacttcttaatgacacaagactcttgaaaaaacttaagaaaggcaaaataactgaa
gaagaatttgagaagggcttgttgacaactggcaaaagaacaatcaagacagtggattta
gggatctcagatttggaagatgactgctga

>gi568815586f:123484637_123696726|GENSCAN_predicted_peptide_4|295_aa
MDDKELIEYFKSQMKEDPDMASAVAAIRTLLEFLKRDKGETIQGLRANLTSAIETLCGVD
SSVAVSSGGELFLRFISLASLEYSDYSKCKKIMIERGELFLRRISLSRNKIADLCHTFIK
DGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDFKKMAKALCHLNVPVTVVLDAA
VGYIMEKADLVIVGAEGVVENGGIINKRAVSGSSTLITHTKALPGQSTKYSVPTNVYFSP
QYKADTLKVAQTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELIKLYL

>gi568815586f:123484637_123696726|GENSCAN_predicted_CDS_4|888_bp
atggacgacaaggagttaattgaatactttaagtctcagatgaaagaagatcctgacatg
gcctcagcagtggctgccatccggacgttgctggagttcttgaagagagataaaggggag
acaatccagggtctgagggcgaatctcaccagtgccatagaaaccctgtgtggtgtggac
tcctctgtggcagtgtcctctggcggggagctcttcctccgcttcatcagtcttgcctcc
ctggaatactccgattactccaaatgtaaaaagatcatgattgagcggggagaacttttt
ctcaggagaatatcactgtcaagaaacaaaattgcagatctgtgccatactttcatcaaa
gatggagcgacaatattgactcacgcctactccagagtggtcctgagagtcctggaagca
gccgtggcggccaagaagcgatttagtgtatacgtcacagagtcacagcctgattttaag
aaaatggccaaagccctctgccacctcaacgtccctgtcactgtggtgctagatgctgct
gtcggctacatcatggagaaagcagatcttgtcatagttggtgctgaaggagttgttgaa
aacggaggaattattaacaagagagcagtctcaggaagtagcacactgatcactcacacc
aaggccctaccaggtcagagcactaaatattcagtgccgactaatgtgtacttctctcct
cagtataaggcagacactctcaaggtcgcgcagactggacaagacctcaaagaggagcat
ccgtgggtcgactacactgccccttccttaatcactctgctgtttacagacctgggcgtg
ctgacaccctcagcagtcagcgatgagctcatcaagctctatctgtaa

>gi568815586f:123484637_123696726|GENSCAN_predicted_peptide_5|171_aa
MVLGNSHLFMNRSNKLAVIASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKY
ELLTSANEVIVEEIKDLMTKNNQEMKSRILACDITGGLYLKVPQMPSLLQYLLWVFLPDQ
DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSMLKAKKKKLKVSA

>gi568815586f:123484637_123696726|GENSCAN_predicted_CDS_5|516_bp
atggtgctgggaaattcgcatttattcatgaatcgttccaacaaacttgctgtgatagca
agtcacattcaagaaagccgattcttatatcctggaaagaatggcagacttggagacttc
ttcggagaccctggcaaccctcctgaatttaatccctctgggagtaaagatggaaaatac
gaacttttaacctcagcaaatgaagttattgttgaagagattaaagatctaatgaccaaa
aacaatcaggaaatgaaatcaaggatattggcttgtgacatcacgggaggactgtacctg
aaggtgcctcagatgccttctcttctgcagtatttgctgtgggtgtttcttcccgatcaa
gatcagagatctcagttaatcctcccacccccagttcatgttgactacagggctgcttgc
ttctgtcatcgaaatctcattgaaattggttatgtctgttctgtgtgtttgtcaatgctg
aaagccaagaaaaagaaactgaaagtgtctgcctga

>gi568815586f:123484637_123696726|GENSCAN_predicted_peptide_6|376_aa
MGFQPPAALLLRLFLLQGILRLLWGDLAFIPPFIRMSGPAVSASLVGDTEGVTVSLAVLQ
DEAGILPIPTCGVLNNETEDWSVTVIPENVTVIPNQVYQPLGPCPCNLTAGACDVRCCCD
QECSSNLTTLFRRSCFTGVFGGDVNPPFDQLCSAGTTTRGVPDWFPFLCVQSPLANTPFL
GYFYHGAVSPKQDSSFEVYVDTDAKDFADFGYKQGDPIMTVKKAYFTIPQVSLAGQCMQN
APVAFLHNFDVKCVTNLELYQERDGIINAKIKNVALGETPLNNGSTPRIVNVEEHYIFKW
NNNTISEINVKIFRAEINAHQKGIMTQRFVVKFLSYNSGNEEELSGNPGYQLGKPVRALN
INRMNNVTTLHLWQSX

>gi568815586f:123484637_123696726|GENSCAN_predicted_CDS_6|1128_bp
atgggcttccagcctccggccgctcttcttttgaggcttttccttctgcagggcatcctg
aggcttctgtggggggacctggctttcatccctccttttatccgaatgtccggccctgcg
gtcagcgcgtccctggtcggagacaccgagggtgtgaccgtgtccctggcagtgctgcag
gacgaggcgggaatattgccaattccgacgtgtggagtgctgaacaatgagacggaagac
tggagcgtgactgtgatccccgagaacgtgactgtcattcctaaccaggtgtatcagccc
cttggcccttgtccttgtaatttaacagctggagcctgtgatgttcgctgctgctgtgac
caggaatgctcatcaaatttaacaacgctgttcagacggtcctgcttcaccggcgtgttt
ggaggagacgtcaatcctccttttgatcagctctgctctgctgggacgacgacacgtggt
gtccccgattggtttccctttctgtgtgtgcagtccccccttgccaacacacccttcctt
ggttacttctatcatggtgctgtttcccccaaacaggactcttcctttgaagtatatgtg
gatactgacgcaaaagactttgcagactttggttacaaacaaggagatcccattatgact
gtaaagaaggcatattttactattccgcaggtgtccctggctgggcagtgtatgcagaac
gccccagtggcatttcttcacaattttgatgttaaatgcgttactaatttggaactatac
caagaacgagatggtattatcaatgcgaagataaagaatgttgccttaggagaaactcct
ttaaataacggatcaacccctagaattgtgaatgtggaagaacattatattttcaaatgg
aataataataccatcagtgaaataaatgttaaaatttttagggcagagattaatgcccac
cagaaagggataatgacacagagatttgtagtaaaatttttaagctataatagtggtaat
gaagaagaattatctggaaatccaggttaccaacttggcaagcctgtccgagctctaaat
atcaacaggatgaataatgtcacgactttacatctttggcaatcggnn