GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:25:56

Sequence gi568815586f:120203562_120413033 : 209472 bp : 49.94% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 PlyA -     27     22    6                               1.05
 1.13 Term -   9019   8753  267  1  0  103   43   564 0.960  48.89
 1.12 Intr -  10429  10281  149  2  2   69   90   300 0.999  28.25
 1.11 Intr -  10656  10575   82  0  1  105  102    75 0.998   9.81
 1.10 Intr -  11437  11264  174  1  0  112   76   334 0.999  34.74
 1.09 Intr -  11712  11542  171  0  0  111   64   188 0.996  18.84
 1.08 Intr -  13555  13280  276  1  0  124   38   198 0.471  16.11
 1.07 Intr -  16530  15595  936  0  0  134  -11   200 0.464   6.08
 1.06 Intr -  18197  18062  136  1  1   69   44   208 0.993  15.07
 1.05 Intr -  19129  18988  142  2  1   73   67   170 0.510  12.81
 1.04 Intr -  19438  19302  137  0  2   61   91   154 0.998  13.21
 1.03 Intr -  20272  20157  116  1  2   78   84   154 0.871  13.25
 1.02 Intr -  20816  20590  227  0  2  119   94   223 0.999  23.70
 1.01 Init -  27424  27274  151  1  1   66   47    91 0.261   3.01
 1.00 Prom -  27702  27663   40                              -4.56

 2.00 Prom +  30125  30164   40                              -3.16
 2.01 Init +  31190  31240   51  1  0   55   85    43 0.431   1.86
 2.02 Term +  45012  45182  171  2  0  105   39   122 0.207   6.83
 2.03 PlyA +  45578  45583    6                               1.05

 3.00 Prom +  51834  51873   40                              -4.16
 3.01 Init +  62067  62379  313  2  1   65   80   117 0.393   4.09
 3.02 Term +  78686  79155  470  0  2   36   48   609 0.945  46.84
 3.03 PlyA +  79274  79279    6                               1.05

 4.00 Prom +  90297  90336   40                              -1.06
 4.01 Init + 100007 100497  491  1  2   64   61   283 0.244  17.88
 4.02 Intr + 108859 109189  331  1  1   72   70   234 0.224  15.63
 4.03 Term + 109323 109475  153  2  0  112   47    54 0.971   1.62
 4.04 PlyA + 109660 109665    6                               1.05

 5.06 PlyA - 109964 109959    6                               1.05
 5.05 Term - 118756 118632  125  2  2  114   42   185 0.996  15.05
 5.04 Intr - 121500 121373  128  2  2  101   42   161 0.996  13.12
 5.03 Intr - 122459 122300  160  0  1   81  108   349 0.884  35.25
 5.02 Intr - 132706 132521  186  2  0   67   74    60 0.485   2.16
 5.01 Init - 133600 133546   55  1  1   92   87     0 0.368   1.89
 5.00 Prom - 134592 134553   40                              -6.06

 6.15 PlyA - 134987 134982    6                               1.05
 6.14 Term - 139544 139509   36  2  0   85   52    64 0.495  -0.16
 6.13 Intr - 142728 142574  155  1  2  106   84   252 0.953  26.39
 6.12 Intr - 143953 143885   69  2  0   94   99    92 0.994  10.05
 6.11 Intr - 144127 144101   27  2  0   99   63    34 0.510   0.09
 6.10 Intr - 149818 149738   81  2  0   97  131    91 0.991  13.91
 6.09 Intr - 153458 153341  118  2  1   35   59   121 0.687   3.94
 6.08 Intr - 154337 154255   83  0  2   92  101   107 0.981  11.76
 6.07 Intr - 155492 155444   49  2  1   66  105   123 0.916  10.05
 6.06 Intr - 159574 159482   93  1  0  112   98   150 0.994  18.56
 6.05 Intr - 161194 161153   42  1  0   97  100    14 0.737   1.94
 6.04 Intr - 164531 164447   85  1  1   53   79    84 0.608   3.82
 6.03 Intr - 164712 164631   82  1  1   35   99   134 0.986   7.90
 6.02 Intr - 164926 164856   71  0  2   66   40    64 0.626  -1.77
 6.01 Init - 165420 165272  149  0  2  121   84    97 0.680  10.17
 6.00 Prom - 179698 179659   40                              -4.76

 7.04 PlyA - 180809 180804    6                               1.05
 7.03 Term - 185463 185385   79  2  1   77   38   106 0.816   1.74
 7.02 Intr - 189797 189736   62  2  2   77  107    32 0.705   1.53
 7.01 Init - 192237 192184   54  0  0   92   90    59 0.799   5.78
 7.00 Prom - 208604 208565   40                              -1.96


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 124192 124159   34  1  1   64   96    58 0.861   2.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:120203562_120413033|GENSCAN_predicted_peptide_1|987_aa
MASNKTDKAPALWSLILGEETVDKNPNWQGRPLKETEFLVSVQALGPWAGDALLADLEST
TSHISKRPVFLSEETPYSYPTGNHTYQEIAVPPPVPPPPSSEALNGTILDPLDQWQPSSS
RFIHQQPQSSSPVYGSSAKTSSVSNPQDSVGSPCSRVGEEEHVYSFPNKQKSAEPSPTVM
STSLGSNLSELDRLLLELNAVQHNPPGFPAETNSPLGGKAGPLTKEKPKRNGGRGLEDVR
PSVESLLDELESSVPSPVPAITVNQGEMSSPQRVTSTQQQTRISASSATRELDELMASLS
DFKTSSSTVALSAPGLSSSAPSSYCSLPPSPPPMPSVFLPPTTIPSPRGQGHTPEFPCTE
QSGRGLLPPVAPSWLDLAGLGVMPDTFNSRSPSVEGSLWAVGTESQGRDWRHLPTITSEL
SGAPRCHTVPCAGSTALQEPGEPQGPPASPSCPEEALAATWEQPWASEVFGPERMPPSGA
ARSFQEVTEPAVVAVDRQAIFPDTWTLTEEHGLQQERPRPEPGRLGSSSPASVTTEQLGA
KMTERGSVARPTQGPETPRSPEGTTEAATQDGKEQPELPCAMAMGTPSTTERISTSGQAG
TSSHGCWAWPLAGLSIRSVIRRSWESGHAHPMSREPSPRRRLDPATLSRTPSQEQLIAEL
QGRLGIQPEAEEPAEAAGPSAQDWLTEGVIITVQPRGKRAGGQLVEKFMAQGKTGSSSPP
GGPPKPGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVC
THCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCA
QCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRE
CFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFC
LKQLNKGTFKEQNDKPYCQNCFLKLFC

>gi568815586f:120203562_120413033|GENSCAN_predicted_CDS_1|2964_bp
atggcatcgaacaagaccgacaaggcccctgctctctggagcttaattcttggagaggag
acagttgacaagaacccaaattggcagggaaggcccctcaaggagactgagttcctagtc
agtgtccaggccctaggtccctgggctggggacgccctgctggcggacttggagtctacc
acctcccacatctccaaacggcctgtgttcttgtcggaggagaccccctactcataccca
actggaaaccacacataccaggagattgccgtgccaccccccgtccccccacccccgtcc
agcgaggccctcaatggcacaatccttgaccccttagaccagtggcagcccagcagctcc
cgattcatccaccagcagcctcagtcctcatcacctgtgtacggctccagtgccaaaact
tccagtgtctccaaccctcaggacagtgttggctctccgtgctcccgagtgggtgaggag
gagcacgtctacagcttccccaacaagcagaaatcagctgagccttcacccaccgtaatg
agcacgtccctgggcagcaacctttctgaactcgaccgcctgctgctggaactgaacgct
gtacagcataacccgccaggcttccctgcagagactaacagccccttgggaggcaaagct
gggcccctgacgaaagagaagcctaagcggaatgggggccggggcctggaggacgtgcgg
cccagtgtggagagtctcttggatgaactggagagctccgtgcccagccccgtccctgcc
atcactgtgaaccagggcgagatgagcagcccgcagcgcgtcacctccacccaacagcag
acacgcatctcggcctcctctgccaccagggagctggacgagctgatggcttcgctgtcg
gatttcaagaccagctcctccactgtggctctgagtgccccggggctgtccagctctgct
ccgtcctcatactgctcccttcctccttctcctcctcccatgccatctgtatttctgcca
cccaccactataccctcccctcgaggccagggccacactccggagttcccttgtactgag
cagagtggacgaggccttctacctcctgtagcccccagctggcttgatttggctggtctt
ggggtgatgcctgacaccttcaactcaaggtctccctctgtggagggttctctgtgggca
gtgggcacagagagtcagggtcgagattggaggcacctgccgaccatcacaagtgagctc
tctggggctccccgctgccacactgtaccctgtgctgggagcacagctctccaagagcct
ggggagccccaggggccaccagccagcccttcgtgcccagaggaggccttggctgccaca
tgggagcagccatgggcttcggaggtattcgggcctgagagaatgcccccctctggagct
gctcgaagcttccaagaagtaacagagccagctgtagtggcagtggaccggcaggccatc
ttcccagatacctggactctcacggaggaacatggcctacagcaggagaggccaaggcca
gagccagggaggctgggaagcagctcccctgcctcagttaccacggagcagctaggtgca
aagatgaccgagaggggaagtgtggccaggccaacccagggacctgaaaccccaaggagc
ccagagggcaccacggaagctgccacccaggacgggaaggaacagccagagcttccatgt
gccatggccatgggcacacccagcaccacggagaggatttccacctctggccaggcaggc
accagctcgcatggctgctgggcatggccattggcgggtctgagtatccgatctgtgatc
aggaggagctgggagtctggccacgcacaccccatgtcccgggagccctcccctcgccgc
cggctggaccctgccaccttgagcaggaccccatcccaggaacagctcatcgcggagctg
caggggcggctgggcatccagcctgaggcagaggagccggcggaggcggcggggccctct
gcccaggactggctgaccgagggcgtcatcatcactgtgcagccacgtgggaagcgggcc
ggggggcagctcgtagagaagttcatggcccaggggaagacagggagcagctcaccccct
ggggggcccccgaagcccgggagccagctggacagcatgctggggagcctgcagtctgac
ctgaacaagctgggggtcgccacagtcgccaaaggagtctgcggggcctgcaagaagccc
atcgccgggcaggttgtgaccgccatggggaagacgtggcaccccgagcacttcgtctgc
acccactgccaggaggagatcggatcccggaacttcttcgagcgggatggacagccctac
tgtgaaaaggactaccacaacctcttctccccgcgctgctactactgcaacggccccatc
ctggataaagtggtgacagcccttgaccggacgtggcaccctgaacacttcttctgtgca
cagtgtggagccttctttggtcccgaagggttccacgagaaggacggcaaggcctactgt
cgcaaggactacttcgacatgttcgcacccaagtgtggcggctgcgcccgggccatcctg
gagaactatatctcagccctcaacacgctgtggcatcctgagtgctttgtgtgccgggaa
tgcttcacgccattcgtgaacggcagcttcttcgagcacgacgggcagccctactgtgag
gtgcactaccacgagcggcgcggctcgctgtgttctggctgccagaagcccatcaccggc
cgctgcatcaccgccatggccaagaagttccaccccgagcacttcgtctgtgccttctgc
ctcaagcagctcaacaagggcaccttcaaggagcagaacgacaagccttactgtcagaac
tgcttcctcaagctcttctgctag

>gi568815586f:120203562_120413033|GENSCAN_predicted_peptide_2|73_aa
MDEKECESHPGGWDKINWHRVASPSLASRNQNRVYNVSKGLYATVTESNPSSTTNQQLTS
GKLLTSLCFSVVS

>gi568815586f:120203562_120413033|GENSCAN_predicted_CDS_2|222_bp
atggatgaaaaagaatgtgagagccatcctggtggctgggataaaataaactggcaccgc
gtggcatcaccctcattggcgagcaggaatcagaacagagtctacaatgtcagcaaaggg
ctgtatgcgacagtcactgaatccaatcccagctccaccactaatcagcaactaacctcg
ggcaagttgctcacctctctgtgcttcagtgtcgtcagctag

>gi568815586f:120203562_120413033|GENSCAN_predicted_peptide_3|260_aa
MAGPRAPAQGRASCPSRGRSSMPRNFSAASLGPERNAPPPRAPAPAPAARPAPGRPLCTR
APPPDTPASLLAPPPAHAGPAPAKSPGSGRRWAGRWRPLAAKRAASRTTANLERTFITIR
PDSMQCGLVGKIIKRFEQKGFRLVAMKFLPASEEHLKQHYIDLKDRPFFPGLVKYMNSGP
VVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISL
RFKPEELVDYKSCAHDWVYE

>gi568815586f:120203562_120413033|GENSCAN_predicted_CDS_3|783_bp
atggccggaccacgggcgccggctcagggtcgcgctagctgcccgtcccggggccgctcg
tctatgccccgcaacttttccgccgcgagcctcggcccggaacggaacgcgccgccgccg
cgcgcgcccgcgcccgcgcccgccgcgcgccccgcccccggccgccccctgtgcacgcgc
gccccgcccccggacacccccgcgagcttgctggccccgccccctgcgcacgctggtccc
gcccccgccaagagcccgggcagtgggcgtcgctgggcggggcggtggcgccccctcgcg
gctaagcgggcagcttcccggaccacggccaacctcgagcgcaccttcatcaccatcagg
ccggacagcatgcagtgcggcctggtgggcaagatcatcaagcgcttcgagcagaagggg
ttccgcctcgtggccatgaagttcctcccggcctctgaagaacacctgaagcagcactac
attgacctgaaggaccgcccattcttccctgggctggtgaagtacatgaactcagggccg
gtcgtggccatggtctgggaggggctgaacgtcgtgaagacaggccgagtgatgcttggg
gagaccaatccagcagattctaagccaggcaccattcgtggggacttttgcattcaggtt
ggcaggaacatcattcatggcagtgattcagtaaaaagtgctgaaaaagaaatcagccta
cggtttaagcctgaagaactggttgactacaagtcttgtgctcatgactgggtctatgaa
taa

>gi568815586f:120203562_120413033|GENSCAN_predicted_peptide_4|324_aa
MSFALTFRSAKGRWIANPSQPCSKASIGLFVPASPPLDPEKVKELQRFITLSKRLLVMTG
AGISTESGIPDYRSEKVGLYARTDRRPIQHGDFVRSAPIRQRYWARNFVGWPQFSSHQPN
PAHWALSTWEKLGKLYWLVTQNVDALHTKAGSRRLTELHGCMDRAYCSVSVFLGSRVLCL
DCGEQTPRGVLQERFQVLNPTWSAEAHGLAPDGDVFLSEEQVRSFQVPTCVQCGGHLKPD
VVFFGDTVNPDKVDFVHKRVKEADSLLVVGSSLQVYSGYRFILTAWEKKLPIAILNIGPT
RSDDLACLKLNSRCGELLPLIDPC

>gi568815586f:120203562_120413033|GENSCAN_predicted_CDS_4|975_bp
atgagctttgcgttgactttcaggtcagcaaaaggccgttggatcgcaaaccccagccag
ccgtgctcgaaagcctccattgggttatttgtgccagcaagtcctcctctggaccctgag
aaggtcaaagagttacagcgcttcatcaccctttccaagagactccttgtgatgactggg
gcaggaatctccaccgaatcggggataccagactacaggtcagaaaaagtggggctttat
gcccgcactgaccgcaggcccatccagcatggtgattttgtccggagtgccccaatccgc
cagcggtactgggcgagaaacttcgtaggctggcctcaattctcctcccaccagcctaac
cctgcacactgggctttgagcacctgggagaaactcggaaagctgtactggttggtgacc
caaaatgtggatgctttgcacaccaaggcggggagtcggcgcctgacagagctccacgga
tgcatggacagggcatactgttcagtcagcgtcttccttggttccagggtcctgtgcttg
gattgtggggaacagactccccggggggtgctgcaagagcgtttccaagtcctgaacccc
acctggagtgctgaggcccatggcctggctcctgatggtgacgtctttctctcagaggag
caagtccggagctttcaggtcccaacctgcgttcaatgtggaggccatctgaaaccagat
gtcgttttcttcggggacacagtgaaccctgacaaggttgattttgtgcacaagcgtgta
aaagaagccgactccctcttggtggtgggatcatccttgcaggtatactctggttacagg
tttatcctcactgcctgggagaagaagctcccgattgcaatactgaacattgggcccaca
cggtcggatgacttggcgtgtctgaaactgaattctcgttgtggagagttgctgcctttg
atagacccatgctga

>gi568815586f:120203562_120413033|GENSCAN_predicted_peptide_5|217_aa
MVPCIPATPAPAVAKRSQETRECRNKDTRQRDKRKDSWARGTTTTKSRRPVVALNVWLHC
YLLDTKQKGQGKECESSPMILAAADSGISPRAVWQFRKMIKCVIPGSDPFLEYNNYGCYC
GLGGSGTPVDELDKCCQTHDNCYDQAKKLDSCKFLLDNPYTHTYSYSCSGSAITCSSKNK
ECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS

>gi568815586f:120203562_120413033|GENSCAN_predicted_CDS_5|654_bp
atggtgccctgcatcccagccactccagctccagctgtggctaaaaggagccaagagacg
agagagtgtagaaataaagacacaagacaaagagataaaagaaaagacagctgggcccgg
ggaaccactaccaccaagtcacggagaccggtagtggccctgaatgtctggctgcactgt
tatttattggatacaaagcaaaaggggcagggtaaagagtgcgagtcatctccaatgata
ctggccgccgccgacagcggcatcagccctcgggccgtgtggcagttccgcaaaatgatc
aagtgcgtgatcccggggagtgaccccttcttggaatacaacaactacggctgctactgt
ggcttggggggctcaggcacccccgtggatgaactggacaagtgctgccagacacatgac
aactgctatgaccaggccaagaagctggacagctgtaaatttctgctggacaacccgtac
acccacacctattcatactcgtgctctggctcggcaatcacctgtagcagcaaaaacaaa
gagtgtgaggccttcatttgcaactgcgaccgcaacgctgccatctgcttttcaaaagct
ccatataacaaggcacacaagaacctggacaccaagaagtattgtcagagttga

>gi568815586f:120203562_120413033|GENSCAN_predicted_peptide_6|379_aa
MADPGPAGPPRSPGPRPLRPGARRSRGPFVSLLLPQQDVHRGTQLADYAGPARPSASRGP
GGRQEAQRERGEGEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ
SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML
MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRS
RVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPGQDTDGVAQAIPLTAY
GPMAAAAAAAAVVRGTGSTPSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPS
TGFGHSLGRPSLQLTEDHE

>gi568815586f:120203562_120413033|GENSCAN_predicted_CDS_6|1140_bp
atggccgatccgggtccggccgggcctccccggagcccgggcccgcgccccctgcgccct
ggcgcccggcgctcacgcgggccctttgtgtctctcctcctcccgcagcaagatgttcat
cgggggactcagttggcagactacgcaggcccagctcggccctcggcttcccggggcccc
ggtgggcgccaggaggctcagcgggaacggggcgagggcgaagggctgcgcgaatacttc
ggccagttcggggaggtgaaggagtgtctggtgatgcgggaccccctgaccaagagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtgctggcgcaa
tcgcggcacgagctcgactccaaaacaattgaccctaaggtggccttccctcggcgagca
cagcccaagatggtgactcgaacgaagaagatctttgtgggggggctgtcggtgaacacc
acggtggaggacgtgaagcaatattttgagcagtttgggaaggtggacgacgccatgctg
atgtttgacaaaaccaccaaccggcaccgagggttcgggtttgtcacgtttgagagtgag
gacatcgtggagaaagtgtgtgaaattcattttcatgaaatcaacaacaaaatggtggaa
tgtaagaaagctcagccaaaggaggtgatgtcgccaacgggctcagcccgggggaggtct
cgagtcatgccctacggaatggacgccttcatgctgggcatcggcatgctgggttaccca
ggtttccaagccacaacctacgccagccggagttatacaggcctcgcccctggctacacc
taccagttccccggtcaggacacagatggtgtggcccaagccattcctctcactgcctac
ggaccaatggcggcggcagcggcggcagcggctgtggttcgagggacaggttcgactccc
agccgcacagggggcttcctggggaccaccagccccggccccatggccgagctctacggg
gcggccaaccaggactcgggggtcagcagttacatcagcgccgccagccctgcccccagc
accggcttcggccacagtcttgggcgccccagcctgcagctgactgaggaccacgagtga

>gi568815586f:120203562_120413033|GENSCAN_predicted_peptide_7|64_aa
MGRARWLTPVIPALLEAEVPIMHPLSACSLCHPVNALVRSRDADWLRAGPWAQRCVSIIV
RDCE

>gi568815586f:120203562_120413033|GENSCAN_predicted_CDS_7|195_bp
atgggccgggcacggtggctcacacctgtaatcccagcacttttggaggctgaggtcccc
atcatgcacccgctcagtgcttgttctctctgccatcctgtcaatgcccttgtgagatca
cgtgatgccgactggctccgagctgggccctgggctcagcgctgtgtgagcatcattgta
cgggactgtgaatag