GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:22:43

Sequence gi568815586f:118036210_118244800 : 208591 bp : 44.15% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 Intr -    301    129  173  1  2  111   72    90 0.626   8.44
 1.12 Intr -   2179   2079  101  2  2  107  109    36 0.967   7.43
 1.11 Intr -   6763   6632  132  2  0   95   68    94 0.989   8.72
 1.10 Intr -   7168   6924  245  0  2   45   96   131 0.558   6.74
 1.09 Intr -  16269  16101  169  1  1   65   81   116 0.433   7.60
 1.08 Intr -  32388  32168  221  2  2   32  121   301 0.177  25.75
 1.07 Intr -  34858  34843   16  2  1   83  109     0 0.177  -3.80
 1.06 Intr -  35260  35150  111  2  0   50  116    26 0.715   1.95
 1.05 Intr -  37783  37490  294  2  0   59  113   263 0.704  22.88
 1.04 Intr -  43397  43137  261  0  0  118   70   118 0.613  10.46
 1.03 Intr -  46220  45918  303  0  0  116   36   409 0.644  35.06
 1.02 Intr -  59605  59324  282  2  0   63  100   222 0.960  18.29
 1.01 Init -  67462  67384   79  1  1  103   82   163 0.991  16.45
 1.00 Prom -  68916  68877   40                              -6.76

 2.00 Prom +  78909  78948   40                              -2.16
 2.01 Init +  87870  87918   49  2  1   96   89    40 0.495   4.01
 2.02 Term +  92267  92883  617  0  2   66   48   126 0.417   1.03
 2.03 PlyA +  93022  93027    6                              -0.45

 3.00 Prom +  93290  93329   40                              -2.36
 3.01 Init + 100001 100135  135  1  0   95   86   278 0.997  28.44
 3.02 Intr + 101830 101939  110  0  2   72   94    29 0.951   0.98
 3.03 Intr + 103242 103342  101  0  2   91   92   137 0.994  14.15
 3.04 Term + 108377 108594  218  0  2  118   50   324 0.998  28.91
 3.05 PlyA + 109352 109357    6                               1.05

 4.16 PlyA - 113610 113605    6                               1.05
 4.15 Term - 114949 114788  162  1  0   69   50   148 0.994   7.04
 4.14 Intr - 116200 116018  183  1  0  106  116   226 0.999  27.18
 4.13 Intr - 124149 123937  213  0  0   88  115   114 0.997  13.01
 4.12 Intr - 125818 125579  240  1  0   87  116   309 0.915  31.35
 4.11 Intr - 136451 136248  204  2  0   84   53   245 0.960  20.00
 4.10 Intr - 141120 140992  129  0  0   51   94   114 0.982   9.19
 4.09 Intr - 145398 145162  237  0  0   73   78   521 0.987  47.41
 4.08 Intr - 153732 153598  135  0  0  105   99    69 0.998  10.46
 4.07 Intr - 163048 162815  234  1  0   90   83   220 0.557  19.59
 4.06 Intr - 165254 165087  168  2  0   74   50   113 0.753   6.24
 4.05 Intr - 176418 176283  136  2  1   82   40    -6 0.050  -5.43
 4.04 Intr - 177901 177808   94  2  1  112   95    67 0.765   8.82
 4.03 Intr - 197556 197465   92  2  2   68   92    60 0.781   4.04
 4.02 Intr - 199462 199349  114  0  0  112   84    20 0.748   3.56
 4.01 Intr - 201960 201864   97  1  1  113   82    31 0.770   4.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:118036210_118244800|GENSCAN_predicted_peptide_1|796_aa
MAAGGSAPEPRVLVCLGALLAGWVAVGLEAVVIGEVHENVTLHCGNISGLRGQVTWYRNN
SEPVFLLSSNSSLRPAEPRFSLVDATSLHIESLSLGDEGIYTCQEILNVTQWFQVWLQVA
SGPYQIEVHIVATGTLPNGTLYAARGSQVDFSCNSSSRPPPVVEWWFQALNSSSESFGHN
LTVNFFSLLLISPNLQGNYTCLALNQLSKRHRKVTTELLVYYPPPSAPQCWAQMASGSFM
LQLTCRWDGGYPDPDFLWIEEPGGVIVGKSKLGVEMLSESQLSDGKKFKCVTSHIVGPES
GASCMVQIRGPSLLSEPMKTCFTGGNVTLTCQVSGAYPPAKILWLRNLTQPEVIIQPSSR
HLITQDGQNSTLTIHNCSQDLDEGYYICRADSPVGVREMEIWLSVKEPLNIGGIVGTIVS
LLLLGLAIISGLLLHYSPVFCWKVGNTSRGQNMDDVMVLVDSEEEEEEEEEEEEDAAVGE
QEGAREREELPKEIPKQDHIHRVTALVNGNIEQMGNGFQDLQEEPLLLAELKPGRPHQFD
WKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKNETKGRGS
PKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQT
GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYC
CSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTN
VIMWDPYTGERLRSLH

>gi568815586f:118036210_118244800|GENSCAN_predicted_CDS_1|2388_bp
atggccgcaggcggcagtgcgcccgagccccgcgtcctcgtctgcctcggggcgctcctg
gccggctgggtcgccgtaggattggaggctgttgtcattggagaagttcatgagaatgtt
actctgcactgtggcaacatctcgggactgaggggccaggtgacctggtaccggaacaac
tcggagcctgtcttccttctctcgtccaactctagcctccggccagctgagcctcgcttc
tctctagtggatgccacctccctgcacattgaatcgctgagcctgggagatgagggaatc
tacacctgccaggagatcctgaatgtgactcagtggttccaagtgtggctgcaggtggcc
agcggcccctatcagattgaggtccacatcgtggccaccggcacactccccaacggcacc
ctctacgcagccaggggctcccaggtggacttcagctgcaacagcagctccaggccacca
cccgtggttgaatggtggttccaggccctgaattccagcagcgagtcctttggccacaac
ctgacagtcaactttttctcactgttactgatatcgccaaacctccaagggaactacacc
tgtttagccttgaatcagctcagcaagagacatcgaaaggtgaccaccgagctcctggtc
tactatccccctccatcagctccccagtgctgggcacagatggcatcaggatcgttcatg
ttgcagcttacctgtcgctgggatgggggataccctgaccctgacttcctgtggatagaa
gagccaggaggtgtaatcgtggggaagtcaaagctgggggtggaaatgctgagcgagtcc
cagctgtcggatggcaagaagttcaagtgtgttacaagccacatagttgggccagagtcg
ggcgccagctgcatggtgcagatcaggggtccctcccttctctctgagcccatgaagact
tgcttcactgggggcaatgtgacgcttacatgccaggtgtctggggcctacccccctgcc
aagatcctgtggctgaggaaccttacccagcccgaggtgatcatccagcctagcagccgc
catctcattacccaggatggccagaactccaccctcactatccacaactgctcccaggac
ctggatgagggctactacatctgccgagctgacagccctgtaggggtgagggagatggaa
atctggctgagtgtgaaagaacctttaaatatcggggggattgtgggaaccattgtgagc
ctccttctgctgggactggccattatctcagggcttctgttgcattatagccctgtgttc
tgctggaaagtaggaaacacttccaggggacaaaacatggatgatgtcatggttttggtg
gattcagaagaggaagaggaggaggaggaggaggaggaggaagatgctgcagtaggggaa
caggagggagcacgtgagagagaggagttgccaaaagaaatacctaagcaggaccacatt
cacagagtgaccgccttggtgaatgggaacatagaacagatgggaaatggattccaggat
cttcaagaggaaccgctgctgctggccgaactcaagcccgggcgcccccaccagtttgat
tggaagtccagctgtgaaacctggagcgtcgccttctccccagatggctcctggtttgct
tggtctcaaggacactgcatcgtcaaactgatcccctggccgttggaggagcagttcatc
cctaaagggtttgaagccaaaagccgaagtagcaaaaatgagacgaaagggcggggcagc
ccaaaagagaagacgctggactgtggtcagattgtctgggggctggccttcagcccgtgg
ccttccccacccagcaggaagctctgggcacgccaccacccccaagtgcccgatgtctct
tgcctggttcttgctacgggactcaacgatgggcagatcaagatctgggaggtgcagaca
gggctcctgcttttgaatctttccggccaccaagatgtcgtgagagatctgagcttcaca
cccagtggcagtttgattttggtctccgcgtcacgggataagactcttcgcatctgggac
ctgaataaacacggtaaacagattcaagtgttatcgggccacctgcagtgggtttactgc
tgttccatctccccagactgcagcatgctgtgctctgcagctggagagaagtcggtcttt
ctatggagcatgaggtcctacacgttaattcggaagctagagggccatcaaagcagtgtt
gtctcttgtgacttctcccccgactctgccctgcttgtcacggcttcttacgataccaat
gtgattatgtgggacccctacaccggcgaaaggctgaggtcactccan

>gi568815586f:118036210_118244800|GENSCAN_predicted_peptide_2|221_aa
MGFLHVGQAGLELLTSELEKTTLKFIWNQKRACIAKTILSKKNKAGGITLPDFKLYYKAT
VTKTAWYWYQNRDIDQWNRTEPSEITPHIYNHLIFDKPIKNKKWGKDFLFNKWCWENWLT
ICRKLKLDPFLTPHTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMSKTPKAM
ATKAKIEKWDLIKELLHSKRNYHQSEQATYRMGENFCHLPI

>gi568815586f:118036210_118244800|GENSCAN_predicted_CDS_2|666_bp
atggggtttctccatgttggtcaggctggtctcgaactcctgacctcagaattggaaaaa
actactttaaagttcatatggaaccaaaaaagagcctgcattgccaagacaatcttaagc
aaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaaggctaca
gtaaccaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaaca
gagccctcagaaataacaccacacatctacaaccatctgatctttgacaaacctatcaaa
aacaagaaatggggaaaggatttcctatttaataaatggtgctgggaaaactggctaacc
atatgtagaaagctgaaactggatcccttccttacacctcatacaaaaattaattcaaga
tggattaaagacttaaatgttagacctaaaaccataaaaaccctagaagaaaacttaggc
aataccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatg
gcaacaaaagccaaaatagaaaaatgggatctaattaaagagcttctgcacagcaaaaga
aactaccatcagagtgaacaggcaacctacagaatgggagaaaatttttgccatctaccc
atctga

>gi568815586f:118036210_118244800|GENSCAN_predicted_peptide_3|187_aa
MPVDLSKWSGPLSLQEVDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDS
GKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRY
VWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAEWDDYVPKL
YEQLSGK

>gi568815586f:118036210_118244800|GENSCAN_predicted_CDS_3|564_bp
atgccggtggacctcagcaagtggtccgggcccttgagcctgcaagaagtggacgagcag
ccgcagcacccgctgcatgtcacctacgccggggcggcggtggacgagctgggcaaagtg
ctgacgcccacccaggttaagaatagacccaccagcatttcgtgggatggtcttgattca
gggaagctctacaccttggtcctgacagacccggatgctcccagcaggaaggatcccaaa
tacagagaatggcatcatttcctggtggtcaacatgaagggcaatgacatcagcagtggc
acagtcctctccgattatgtgggctcggggcctcccaagggcacaggcctccaccgctat
gtctggctggtttacgagcaggacaggccgctaaagtgtgacgagcccatcctcagcaac
cgatctggagaccaccgtggcaaattcaaggtggcgtccttccgtaaaaagtatgagctc
agggccccggtggctggcacgtgttaccaggccgagtgggatgactatgtgcccaaactg
tacgagcagctgtctgggaagtag

>gi568815586f:118036210_118244800|GENSCAN_predicted_peptide_4|812_aa
XHKKPLQEVEIAAITHGALHGLAYLHSHALIHRDIKAGNILLTEPGQVKLADFGSASMAS
PANSFVGTPYWMAPEVILAMDEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALYHI
AQNDSPTLQSNECHHCDVPGPNICININPVVSGQSWLVVQTPTLGFSVRLLPNPQAVKHD
FVRRDRPLRVLIDLIQRTKDAVRELDNLQYRKMKKILFQETRNGPLNESQEDEEDSEHGT
SLNREMDSLGSNHSIPSMSVSTGSQSSSVNSMQEVMDESSSELVMMHDDESTINSSSSVV
HKKVGFLVPSTEDHVFIRDEAGHGDPRPEPRPTQSVQSQALHYRNRERFATIKSASLVTR
QIHEHEQENELREQMSGYKRMRRQHQKQLIALENKLKAEMDEHRLKLQKEVETHANNSSI
ELEKLAKKQVAIIEKEAKVAAADEKKFQQQILAQQKKDLTTFLESQKKQYKICKEKIKEE
MNEDHSTPKKEKQERISKHKENLQHTQAEEEAHLLTQQRLYYDKNCRFFKRKIMIKRHEV
EQQNIREELNKKRTQKEMEHAMLIRHDESTRELEYRQLHTLQKLRMDLIRLQHQTELENQ
LEYNKRRERELHRKHVMELRQQPKNLKAMEMQIKKQFQDTCKVQTKQYKALKNHQLEVTP
KNEHKTILKTLKDEQTRKLAILAEQYEQSINEMMASQALRLDEAQEAECQALRLQLQQEM
ELLNAYQSKIKMQTEAQHERELQKLEQRVSLRRAHLEQKIEEELAALQKERSERIKNLLE
RQEREIETFDMESLRMGFGNLVTLDFPKEDYR

>gi568815586f:118036210_118244800|GENSCAN_predicted_CDS_4|2439_bp
nttcataaaaaaccacttcaggaagtggagatcgctgccattactcatggagccttgcat
ggactagcctacctacattctcatgcattgattcatagggatattaaagcaggaaatatt
cttctaacagagccaggtcaggtaaaactagctgattttggatctgcttcaatggcttct
cctgccaactccttcgtgggcacaccttactggatggctccagaggtgatcttagctatg
gatgaaggacagtatgatgggaaagttgatatttggtcacttggcatcacttgtattgaa
ttggcggaacggaagccgccccttttcaacatgaatgcaatgagtgccttatatcacatt
gcccagaatgactccccaacgttacagtctaatgaatgtcatcattgtgatgttcctggg
cctaacatctgcataaacattaatccagtggtctcaggacagagctggctggtggttcaa
acaccaactctgggattttcagttaggttgttgccaaatcctcaggcagtgaagcatgac
tttgttcgacgagaccggccactacgtgtcctcattgacctcatacagaggacaaaagat
gcagttcgtgagctagataacctacagtaccgaaaaatgaaaaaaatacttttccaagag
acacggaatggacccttgaatgagtcacaggaggatgaggaagacagtgaacatggaacc
agcctgaacagggaaatggacagcctgggcagcaaccattccattccaagcatgtccgtg
agcacaggcagccagagcagcagtgtgaacagcatgcaggaagtcatggacgagagcagt
tccgaacttgtcatgatgcacgatgacgaaagcacaatcaattccagctcctccgtcgtg
cataagaaagtaggtttcttggtaccctccacagaggatcatgtattcataagggatgag
gcgggccacggcgatcccaggcctgagccgcggcctacccagtcagttcagagccaggcc
ctccactaccggaacagagagcgctttgccacgatcaaatcagcatctttggttacacga
cagatccatgagcatgagcaggagaacgagttgcgggaacagatgtcaggttataagcgg
atgcggcgccagcaccagaagcagctgatcgccctggagaacaagctgaaggctgagatg
gacgagcaccgcctcaagctacagaaggaggtggagacgcatgccaacaactcgtccatc
gagctggagaagctggccaagaagcaagtggctatcatagaaaaggaggcaaaggtagct
gcagcagatgagaagaagttccagcaacagatcttggcccagcagaagaaagatttgaca
actttcttagaaagtcagaagaagcagtataagatttgtaaggaaaaaataaaagaggaa
atgaatgaggaccatagcacacccaagaaagagaagcaagagcggatctccaaacataaa
gagaacttgcagcacacacaggctgaagaggaagcccaccttctcactcaacagagactg
tactacgacaaaaattgtcgtttcttcaagcggaaaataatgatcaagcggcacgaggtg
gagcagcagaacattcgggaggaactaaataaaaagaggacccagaaggagatggagcat
gccatgctaatccggcacgacgagtccacccgagagctagagtacaggcagctgcacacg
ttacagaagctacgcatggatctgatccgtttacagcaccagacggaactggaaaaccag
ctggagtacaataagaggcgagaaagagaactgcacagaaagcatgtcatggaacttcgg
caacagccaaaaaacttaaaggccatggaaatgcaaattaaaaaacagtttcaggacact
tgcaaagtacagaccaaacagtataaagcactcaagaatcaccagttggaagttactcca
aagaatgagcacaaaacaatcttaaagacactgaaagatgagcagacaagaaaacttgcc
attttggcagagcagtatgaacagagtataaatgaaatgatggcctctcaagcgttacgg
ctagatgaggctcaagaagcagaatgccaggccttgaggctacagctccagcaggaaatg
gagctgctcaacgcctaccagagcaaaatcaagatgcaaacagaggcacaacatgaacgt
gagctccagaagctagagcagagagtgtctctgcgcagagcacaccttgagcagaagatt
gaagaggagctggctgcccttcagaaggaacgcagcgagagaataaagaacctattggaa
aggcaagagcgagagattgaaacttttgacatggagagcctcagaatgggatttgggaat
ttggttacattagattttcctaaggaggactacagatga