GENSCAN 1.0	Date run:  4-Nov-116	Time: 01:56:02

Sequence gi568815586f:116475943_116676317 : 200375 bp : 46.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1091   1086    6                               1.05
 1.03 Term -   6765   6691   75  0  0   88   49    79 0.721   1.84
 1.02 Intr -  19488  19378  111  0  0    6   84   104 0.146   2.38
 1.01 Init -  21738  21700   39  0  0   66   70    65 0.202   2.70
 1.00 Prom -  22999  22960   40                              -5.56

 2.04 PlyA -  24112  24107    6                               1.05
 2.03 Term -  24292  24162  131  2  2   70   47   107 0.358   3.14
 2.02 Intr -  30971  30856  116  1  2   90   98    29 0.432   4.19
 2.01 Init -  32628  32552   77  0  2   53  -45   181 0.412  -0.14
 2.00 Prom -  38163  38124   40                              -5.36

 3.00 Prom +  46573  46612   40                              -3.16
 3.01 Init +  56662  56800  139  0  1   40   53   141 0.739   6.10
 3.02 Term +  58150  58184   35  2  2  152   42    53 0.991   4.85
 3.03 PlyA +  59360  59365    6                               1.05

 4.00 Prom +  62533  62572   40                              -8.56
 4.01 Init +  64163  64191   29  1  2   95  111     8 0.540   2.96
 4.02 Intr +  68553  68750  198  0  0   78   37    79 0.311   0.27
 4.03 Intr +  75173  75237   65  2  2  106   52    50 0.478   1.56
 4.04 Intr +  77581  77704  124  2  1   66   24   128 0.009   3.84
 4.05 Intr +  83316  83335   20  0  2   92   46    53 0.007  -2.25
 4.06 Term +  99900 100378  479  1  2   37   41   638 0.775  49.00
 4.07 PlyA + 100630 100635    6                               1.05

 5.00 Prom + 105165 105204   40                              -5.96
 5.01 Init + 105231 105327   97  2  1   72  115    72 0.720   8.78
 5.02 Term + 124103 124176   74  0  2   92   48    60 0.074   0.47
 5.03 PlyA + 125442 125447    6                               1.05

 6.04 PlyA - 125488 125483    6                               1.05
 6.03 Term - 130504 130370  135  1  0   75   53   106 0.112   3.82
 6.02 Intr - 138488 138422   67  1  1   72    4   134 0.026   2.31
 6.01 Init - 157719 157622   98  0  2   77   94    50 0.199   4.28
 6.00 Prom - 175083 175044   40                              -4.86

 7.00 Prom + 175198 175237   40                              -6.06
 7.01 Init + 185006 185209  204  1  0   97   44   234 0.850  16.76
 7.02 Intr + 188733 188814   82  2  1   67   67    26 0.205  -2.39
 7.03 Term + 189264 189433  170  1  2   11   54   158 0.288   2.74
 7.04 PlyA + 189609 189614    6                               1.05

 8.02 PlyA - 190277 190272    6                               1.05
 8.01 Sngl - 192688 192482  207  1  0   62   41   143 0.587   2.19
 8.00 Prom - 193708 193669   40                              -1.96


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  77581  77720  140  2  2   66   36   149 0.913   5.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_1|74_aa
MASGKGPVAATSLSFGSLILGEASCQGMRSLRQPCGNVPVEELRPPANSHEDIDQVEGIR
RRAGHMNGGLQEWG

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_1|225_bp
atggcaagtggcaaaggtcctgtggctgctacgagcctgtcttttggatcactcattctg
ggagaagccagctgccagggaatgcggagccttcgacagccctgtgggaatgtccctgtg
gaggaactgaggcctccagccaacagccatgaggatattgaccaagtggaagggattcga
agaagagcaggacacatgaatgggggcctgcaggagtgggggtga

>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_2|107_aa
MQEAARAAAARRARWGRAAQQPPDAAVLGSLTTPQTTYFLGQRALLVFGGIETERSKERP
PPFQGGIVGFLFSPSEKQLHSYMQSSDFSEYLIGARDYVSFEGDKDE

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_2|324_bp
atgcaggaggcagccagagccgcggcggcgcggcgggcccgctggggccgagcagcgcag
cagccccccgacgccgctgtccttggaagtcttacaactccacagaccacgtacttcctg
ggccaaagagcactcctagtctttggggggatagaaactgagagaagcaaagagagacct
ccaccattccaaggtggtattgttgggttcctattcagtccatcagagaagcagctccat
tcatacatgcagtcatctgacttcagtgagtacctgatcggtgccagggactacgttagc
ttcgaaggagacaaagatgaatga

>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_3|57_aa
MVTIIDHHGCWWVVDGSENSIKRKASDEAGTVVQEEDAGGLDQGAHSFPECIYSGYN

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_3|174_bp
atggtgaccatcattgatcatcatggctgctggtgggtagtggatgggagtgagaacagc
attaagaggaaggccagtgatgaggcggggacagtggtccaggaggaagatgcaggtggc
ctggaccagggggcacacagttttcccgaatgtatctactccggttacaactag

>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_4|304_aa
MAPKVPTEHRFDAQPEETGEDLATFCFLLPVFLAPKVHQGGGFHGQTNLANAALNQVTQM
SLLQGQLMCECSSKNSDEFHEDKDLFILFCSSTEQVLSICPKELKAGTLHEDKYIYMHVP
SSAVHDHQEVETTQMSVIINSDEARALHGHSRIRCRSSRHPQEPPGPSRRRRRGPDPHTM
PSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMS
ELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETFGM
KLSV

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_4|915_bp
atggctcctaaggtgccaactgaacacaggtttgacgcacagcctgaggaaactggagag
gacctggccaccttttgcttccttctccccgtgtttctggctcccaaagtacaccaagga
ggaggatttcatgggcaaacaaatttggccaatgctgcattaaaccaagttacccagatg
tctctacttcagggtcagttgatgtgtgaatgttcatccaagaacagtgatgagttccat
gaagacaaagacctgtttatcttgttctgctccagcaccgagcaggtactcagtatatgc
ccaaaagaattgaaagcaggtactctacatgaagacaagtacatctacatgcatgttcct
agcagcgcagttcatgatcaccaggaggtggaaacaacccaaatgtctgtcatcatcaac
agcgacgaggcccgagccttacacggccacagtcggattcgctgccgcagcagccgccac
ccccaggagccgccgggaccctcgcgtcgtcgccgccgcggcccagatccccacaccatg
ccgtcggagaagaccttcaagcagcggcgcaccttcgaacaaagagtagaagatgtccga
cttattcgagagcagcatccaaccaaaatcccggtgataatagaacgatacaagggtgag
aagcagcttcctgttctggataaaacaaagttccttgtacctgaccatgtcaacatgagt
gagctcatcaagataattagaaggcgcttacagctcaatgctaatcaggccttcttcctg
ttggtgaacggacacagcatggtcagcgtctccacaccaatctcagaggtgtatgagagt
gagaaagatgaagatggattcctgtacatggtctgtgcctcccaggagacgttcgggatg
aaattgtcagtgtaa

>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_5|56_aa
MPAPPLPSAMIGSFLRSPQKQMLLRFLYSLQNGEPELAGRKGKSDGITIQGQVSTP

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_5|171_bp
atgcctgctccccctttgccttctgccatgattggaagcttcctgagatctccccagaag
caaatgctgctacgcttcctatatagcctgcagaacggagagccagagctggctggcaga
aaaggcaagtcagatggcatcaccatccaaggccaggtctccactccctga

>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_6|99_aa
MTLHSQKDPGLDEKLYSCAIYGESCKLVSSESRKDIIIIITIIIIVNECILDDLLRGNQG
SERRSDLDNFRVTQLDSLSDLSDLKVSVVQKKRHKWKNQ

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_6|300_bp
atgaccctgcactctcagaaggaccctgggttggatgagaagttatatagttgtgcaatt
tatggagaaagttgtaaactggtgtcatccgagagcagaaaggacatcatcatcatcatc
accatcatcatcatagttaatgagtgcatcctagatgatctcttaagaggaaatcaaggc
tcagagagacgatctgacttggacaattttcgagtgacacagctggattcactctcagat
ctctctgacttgaaagtatctgttgtccagaaaaaaagacataagtggaaaaatcaatga

>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_7|151_aa
MPEPPLPAVGSCAARASPTSAAPCSTGPSPIDHPRAEECGHTAQDWQAAPPAAQYGIHWV
KPTGLLSLNIQHFSNSFDFGTLLDLSFGEDLAVNVEPDLVNDTEEYEHEEMRCHLNLTQS
RKISLSGLPAANVRSPIKLTSQNVEVMDRNI

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_7|456_bp
atgcctgagcctcccctcccggccgtgggctcctgcgcagcccgagcctccccgacgagc
gctgccccctgctccacggggcccagtcccatcgaccacccaagggctgaggagtgtggg
cacacggcgcaggactggcaagcagctccacctgcggcccagtacgggatccactgggtg
aagccaactgggctcctgagtctgaatatacagcatttttcaaactcatttgactttggg
acccttctggatctctcttttggggaggatttggcagtaaatgtagagccagatcttgtg
aatgacactgaagaatatgaacatgaagaaatgcgatgccacctcaacctcacacagtcc
agaaaaatcagcctatcaggcctccctgctgcaaatgtcagaagccccatcaaactgaca
agccagaatgtggaagttatggacagaaacatctga

>gi568815586f:116475943_116676317|GENSCAN_predicted_peptide_8|68_aa
MNNSEIGQPPVPRYAQRPQRSHVVDDWWTEKGKRGTENGCEVQTQPDWLQLGVCLIRTQF
KQLATFIG

>gi568815586f:116475943_116676317|GENSCAN_predicted_CDS_8|207_bp
atgaacaattcagaaattgggcagcctcctgtgccaaggtacgctcagagaccccagcgc
agccatgtggtggatgattggtggactgaaaaaggaaagcgaggtacagaaaatggatgt
gaggtacagacacagccggactggttacagctcggcgtttgccttattcgaacacagttc
aaacagttggctacatttattggctaa