GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:19:52

Sequence gi568815586f:104165309_104365836 : 200528 bp : 42.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6605   6728  124  1  1   65  116   145 0.854  15.38
 1.02 Term +   7388   7665  278  0  2   18   39   164 0.657  -0.86
 1.03 PlyA +   7725   7730    6                               1.05

 2.03 PlyA -   8718   8713    6                               1.05
 2.02 Term -  15545  15378  168  2  0   83   40   111 0.370   2.70
 2.01 Init -  19110  18925  186  0  0   45   43   135 0.165   3.81
 2.00 Prom -  26495  26456   40                              -3.45

 3.00 Prom +  27830  27869   40                              -3.65
 3.01 Init +  39774  39921  148  2  1   87   64   126 0.732  10.40
 3.02 Intr +  49279  49421  143  2  2   68  110    14 0.064   0.75
 3.03 Intr +  50432  50585  154  1  1   22   96   130 0.009   5.92
 3.04 Term +  54660  54724   65  1  2  116   46    31 0.252  -1.23
 3.05 PlyA +  57111  57116    6                               1.05

 4.03 PlyA -  58566  58561    6                               1.05
 4.02 Term -  70088  69896  193  1  1  119   43   132 0.993   7.71
 4.01 Init -  70763  70702   62  2  2  103   77    58 0.895   6.97
 4.00 Prom -  90873  90834   40                              -3.25

 5.00 Prom +  99196  99235   40                              -5.75
 5.01 Sngl + 100001 100531  531  1  0   87   43   840 0.999  75.21
 5.02 PlyA + 100561 100566    6                               1.05

 6.00 Prom + 101901 101940   40                              -8.85
 6.01 Init + 107828 108014  187  1  1   98   -9   225 0.455  13.07
 6.02 Term + 118968 119101  134  1  2   88   48    97 0.253   2.97
 6.03 PlyA + 119328 119333    6                               1.05

 7.03 PlyA - 120905 120900    6                               1.05
 7.02 Term - 121896 121712  185  1  2   30   51   209 0.566   8.12
 7.01 Init - 123717 123594  124  0  1   95   58   182 0.923  16.28
 7.00 Prom - 124375 124336   40                              -5.95

 8.00 Prom + 126686 126725   40                              -7.35
 8.01 Init + 128343 128586  244  2  1   68   82   130 0.612   6.36
 8.02 Intr + 138496 138601  106  2  1   11   24   305 0.059  14.75
 8.03 Term + 138677 139628  952  2  1    6   43   810 0.527  58.85
 8.04 PlyA + 139872 139877    6                               1.05

 9.00 Prom + 143261 143300   40                              -9.25
 9.01 Init + 144630 144791  162  2  0   93  119    48 0.910   8.19
 9.02 Intr + 145982 146128  147  1  0  102  -46   168 0.162   4.31
 9.03 Intr + 147937 148009   73  0  1   93   86    62 0.242   4.56
 9.04 Intr + 150469 150588  120  2  0   76   80    45 0.379   2.05
 9.05 Intr + 153605 153747  143  0  2   39   86   131 0.492   7.15
 9.06 Intr + 154162 154277  116  0  2   76  103    75 0.999   6.13
 9.07 Intr + 155783 156008  226  2  1  112  106   140 0.993  15.26
 9.08 Intr + 160029 160121   93  2  0   70  103    83 0.897   7.24
 9.09 Intr + 161039 161115   77  1  2   64   69    33 0.909  -3.61
 9.10 Intr + 162207 162363  157  0  1   57  113   196 0.999  18.09
 9.11 Intr + 166226 166333  108  1  0   78  107   138 0.999  14.26
 9.12 Intr + 173831 173965  135  1  0   85   90   182 0.999  17.94
 9.13 Intr + 177518 177812  295  1  1    8   19   245 0.324   5.26
 9.14 Term + 183045 183277  233  1  2  122   42   121 0.657   6.55
 9.15 PlyA + 185168 185173    6                               1.05

10.06 PlyA - 187390 187385    6                               1.05
10.05 Term - 190430 190316  115  1  1   73   38    91 0.205  -0.34
10.04 Intr - 190652 190614   39  1  0  121   95    14 0.163   1.82
10.03 Intr - 191398 191157  242  1  2   88   19   125 0.196   1.03
10.02 Intr - 197100 196902  199  2  1  107   89   103 0.924  10.73
10.01 Init - 199433 199357   77  2  2   88  100    33 0.717   5.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  58334  58213  122  0  2  109   42    83 0.800   3.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_1|133_aa
MAKLGSFARSRCCEHQGSELSLQHQTSAMGFRIRGPVPFSEGSLDALGVIGSRDGSTQPL
PATRQGGRGYHTEQQSQSCNQNSLTDANLGRWLIADGVPTSEIDGKPTKFFLDLHKQKTS
RSSEQKPKLNHKK

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_1|402_bp
atggcgaagctaggcagttttgccagaagtcgttgctgtgagcatcagggttcagagttg
agtcttcaacaccagacctctgcgatgggcttccggattcgaggccccgtccctttctca
gaaggaagcctagatgcattaggggtaattggatcccgggatggcagcactcaacccctc
cccgcaacaaggcaaggtgggcgtggttatcatacagaacagcagagtcaaagctgcaat
cagaatagcttgacagatgcaaacctagggcgttggctgattgctgatggtgttcctaca
agtgaaatagatgggaagcctactaaattcttcctggatctgcataagcagaaaacttct
aggtcaagtgaacaaaagcctaagctgaatcataaaaagtag

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_2|117_aa
MLPPTPPSYAHKNSKLHWQRSRAARQRRTRTEASERGEKKKQLDIGDSGWRGVWMGWWRE
VRGRDDWFNGIPVPNIGLSKKYALSGIFVEWFILAMVKSGELRQASCNLASLMPFNV

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_2|354_bp
atgttgccccccacacccccatcatatgcccataaaaactccaagctccactggcagagg
agcagagcagcacggcagagaaggacaaggacagaagcatctgaacgtggagagaagaag
aagcagctggacattggagactctggttggagaggagtttggatgggatggtggagagaa
gttcggggcagggatgactggttcaatggtatcccagtgcctaatatagggcttagcaaa
aaatatgcattatcgggaatatttgttgaatggttcatcctagcaatggtgaagagtgga
gagctgaggcaggcatcttgcaatctagcttcactgatgcccttcaatgtctaa

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_3|169_aa
MDGKPECEGCFPLKPGRPADSPPTAPGRIPLGVHVVLLSLACWCLLVSVEVGEATWPKLK
AKIQEKNAKVLFWQRLHGQGVVGRLAEGVGAGDREYRGARGLRQASFGSVSSHRALCDMG
CAEGKAVAAAAPTELQTKGKNGDGRRRSDLLNQPQSEGSFIFGVSSDSI

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_3|510_bp
atggatgggaagccagagtgtgaaggttgttttcccctgaagccaggccgcccagcggac
tctcctccgactgcccctggccgaattccccttggtgtccatgtcgttctgctgtcactg
gcctgctggtgtctgctggtgtctgttgaggtgggggaggccacctggcccaagctgaag
gccaagatacaagaaaaaaatgcaaaggttctattttggcagcgtttacatgggcagggt
gtcgtggggaggctggcggagggagtgggagcaggtgacagagaatataggggggctcgc
ggcctccgccaggcgtccttcggctccgtcagttcccacagggccttgtgcgacatgggc
tgcgccgagggcaaggcagtggcggcggccgccccaacggagctgcagacgaaaggcaag
aacggcgatggccgccgtaggtcagacctactaaatcagcctcagagtgaaggaagcttc
atttttggtgtctcaagtgattctatttga

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_4|84_aa
MAQEPAAGGYKIFTLPKPLLRYGKQPSSHSQSVTHIRSQSVTTHICSLFGTLTFVAPTPA
PFQVANQDQLRLCGPTPTNGDRTQ

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_4|255_bp
atggcccaggagcctgcagctggaggctacaagattttcaccctccctaaaccgctctta
aggtacggtaaacaaccttccagccattcccaatctgtaacgcacatccgttcccaatct
gtaacaacccacatctgttccttatttggcacccttacttttgtagcccccacccctgct
ccatttcaagtagcaaatcaggatcagcttagattgtgcggtccaaccccaaccaatggg
gatcggacacagtag

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_5|176_aa
MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE
IVYCGQVFEKSPLRVKNFRIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR
AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_5|531_bp
atgaaggcctcgggcacgctacgagagtacaaggtagtgggtcgctgcctgcccaccccc
aaatgccacacgccgcccctctaccgcatgcgaatctttgcgcctaatcatgtcgtcgcc
aagtcccgcttctggtactttgtatctcagttaaagaagatgaagaagtcttcaggggag
attgtctactgtgggcaggtgtttgagaagtcccccctgcgggtgaagaacttcaggatc
tggctgcgctatgactcccggagcggcacccacaacatgtaccgggaataccgggacctg
accaccgcaggcgctgtcacccagtgctaccgagacatgggtgcccggcaccgcgcccga
gcccactccattcagatcatgaaggtggaggagatcgcggccagcaagtgccgccggccg
gctgtcaagcagttccacgactccaagatcaagttcccgctgccccaccgggtcctgcgc
cgtcagcacaagccacgcttcaccaccaagaggcccaacaccttcttctag

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_6|106_aa
MPNNLKACNCFHYNGLIQRKTVGVEPAAHGKGFIVVKQRSSQWKPATFYMQTTINKNARA
GRAMFPALSGVQNMWTARFSKGGPCHVNATEKLGLHIEGPRELLKV

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_6|321_bp
atgcccaataacttgaaggcctgcaactgcttccactacaatgggcttattcaacgcaag
actgtgggcgtggagccggcagcccacggcaaaggtttcatagttgtgaagcagagatcc
agccagtggaagcctgccaccttctacatgcagaccaccattaacaagaatgctcgggca
gggcgggcaatgtttcctgctttaagtggagtacagaatatgtggacagctaggttcagc
aagggtgggccttgccatgtcaacgcgactgagaagcttggacttcatattgagggccct
agagagctactgaaggtttga

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_7|102_aa
MAAYLSLFHKHNGQIGFRGQFRERSFQGPTVLCVAQKQSGACAMLSSPPAGRPPRAPIPG
LAALSGFTRRRAYKNLRMMKTSGPPSGLDHLSLCCKCRSEEN

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_7|309_bp
atggccgcctatctttctctgtttcacaaacacaacgggcagatcggtttccgcggccaa
ttccgagagcgttccttccagggcccgaccgtcctctgtgtggcacaaaagcagagcgga
gcgtgcgcaatgctgtcgtccccgccggcaggccgtcccccgcgtgctcccatccctggg
ctcgcggctttgtctggtttcacccgacgcagagcttacaagaatttgagaatgatgaag
acatcaggccctccttcaggactcgaccacctttcgctctgctgcaaatgccggagtgaa
gaaaactga

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_8|433_aa
MLSSVGTSPTGSVGLSLCAATRECRNKDTRQRDKRKGSWARGTATTNARRPVVAPNVGLH
YYLLDTRQKGQGKECESPPMIEIPVAGMLVEKASRKGDEEKGEEQLVIIPGSEYAANSGE
ADVDPKLLELTADEEKCRSIRRQYRQLMYCVRQNREDIVSSANNSLTEALEEANVLFDGV
SRTREAALDARFLVMASDLGKEKAKQLNSDMNFFNQLAFCDFLFLFVGLNWMEGDPDKLS
DCDDSIALSFWKAIEKEATSWMVKAETFHFVFGSFKLERSAPKPRLEHQKKVRKMEENGN
MPTKLQKLDLSSYPEATEKNVERILGLLQTYFRKYPDTPVSYFEFVIDPNSFSRTVENIF
YVSFIVRDGFARIRLDEDRLPILEPMNVNQMGEGNDSSCHGRKQGVISLTLQEWKNIVAA
FEISEAMITYSSY

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_8|1302_bp
atgttgtccagtgtagggaccagccccacagggtcggtgggtctctccctgtgtgcggcg
acgagagagtgtagaaataaagacacaagacaaagagataagagaaaaggcagctgggcc
cgggggaccgctaccaccaatgcgcggagaccggtagtggccccgaatgtcgggctgcac
tattatttattggatacaaggcagaaggggcagggtaaagaatgtgagtcacctccaatg
atagagatacccgtggccggcatgttggttgaaaaagcttcccggaagggagacgaagag
aaaggagaggagcagctcgtgatcatccccggtagcgagtacgcggcgaactctggggag
gccgacgtagacccaaagctcctggagctcaccgctgacgaggagaagtgccgcagcatc
cgcaggcagtaccggcagctcatgtactgcgtgcggcagaaccgggaggacatcgtgagc
tcggcgaacaactccttaaccgaggctctggaggaagccaacgtcctctttgatggcgtg
agccgaaccagagaagcagccctcgacgcccggtttcttgttatggcttctgatttgggt
aaagaaaaggcaaagcagttaaactcagatatgaacttctttaatcagttagcattttgt
gactttctgtttctgttcgtgggtctgaattggatggaaggcgatcctgacaagttgagt
gattgtgatgatagcatagctctttccttctggaaggcaatagaaaaggaagcaacatcc
tggatggtaaaagctgagacattccattttgtttttggttcattcaagctagaacgttct
gcaccaaagccccgacttgaacaccagaaaaaagttcgcaagatggaagaaaatggcaac
atgcctacaaagttgcagaagttggacctgagtagttatccagaagcgacagaaaaaaac
gtagaaaggattttgggattgttgcaaacctactttcgaaagtatcctgatactcctgtg
tcctattttgagtttgtgattgatccaaactctttttctcgtactgtggagaatatattt
tatgtttcttttattgtaagagatggttttgcaagaataaggcttgatgaagacaggctg
ccaatattagagccgatgaatgttaaccaaatgggtgagggaaatgattccagttgccat
ggcaggaaacagggagttatatctttgactttacaggagtggaaaaacattgtggcagct
tttgaaatttctgaggctatgattacatactcctcatactaa

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_9|694_aa
MLPTGSHSAVLPPSHCSTAPPSTSQEPSSSADPKLCLSPPTSDSRQERNVQFGLAYQEGR
LQKLLKMNGPEDLPKSYDYDLIIIGGGSGGLAAAKARLLVLSVEAAQYGKKVMVLDFVTP
TPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQ
NHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR
YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR
GFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNT
VMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVA
IQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEERVVGF
HVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAELHRGSGTERASEVADPVMWLV
RCMRGDDSGRRCGSGNGVTRLYLRAELIVLGSWLGMGRGRAEDHSGLCPAAGSNSKSRLE
VTARTKPLMCVRACCVLGIHNIVCDQALWGKHPPGWLLRLSPSVDAVAKTANHWLVSVPK
SKAKFSRGFLGSWHLRVLCLPPPKAPLDLLDRSW

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_9|2085_bp
atgctgccaacaggtagccacagtgctgtgcttcctccttcacattgctccaccgcaccc
ccttccacatcccaagaaccttcttcttccgctgaccccaagctctgcctttcaccccct
acatctgatagtaggcaagagagaaatgtgcagtttgggctggcttatcaggagggcaga
cttcaaaagctactaaaaatgaacggccctgaagatcttcccaagtcctatgactatgac
cttatcatcattggaggtggctcaggaggtctggcagctgctaaggcaaggctccttgtg
ttgtctgttgaggcagcccaatatggcaagaaggtgatggtcctggactttgtcactccc
acccctcttggaactagatggggtctcggaggaacatgtgtgaatgtgggttgcatacct
aaaaaactgatgcatcaagcagctttgttaggacaagccctgcaagactctcgaaattat
ggatggaaagtcgaggagacagttaagcatgattgggacagaatgatagaagctgtacag
aatcacattggctctttgaattggggctaccgagtagctctgcgggagaaaaaagtcgtc
tatgagaatgcttatgggcaatttattggtcctcacaggattaaggcaacaaataataaa
ggcaaagaaaaaatttattcagcagagagatttctcattgccactggtgaaagaccacgt
tacttgggcatccctggtgacaaagaatactgcatcagcagtgatgatcttttctccttg
ccttactgcccgggtaagaccctggttgttggagcatcctatgtcgctttggagtgcgct
ggatttcttgctggtattggtttagacgtcactgttatggttaggtccattcttcttaga
ggatttgaccaggacatggccaacaaaattggtgaacacatggaagaacatggcatcaag
tttataagacagttcgtaccaattaaagttgaacaaattgaagcagggacaccaggccga
ctcagagtagtagctcagtccaccaatagtgaggaaatcattgaaggagaatataatacg
gtgatgctggcaataggaagagatgcttgcacaagaaaaattggcttagaaaccgtaggg
gtgaagataaatgaaaagactggaaaaatacctgtcacagatgaagaacagaccaatgtg
ccttacatctatgccattggcgatatattggaggataaggtggagctcaccccagttgca
atccaggcaggaagattgctggctcagaggctctatgcaggttccactgtcaagtgtgac
tatgaaaatgttccaaccactgtatttactcctttggaatatggtgcttgtggcctttct
gaggagaaagctgtggagaagtttggggaagaaaatattgaggaacgtgttgtgggcttt
cacgtactgggtccaaatgctggagaagttacacaaggctttgcagctgcgctcaaatgt
ggactgaccaaaaagcagctggacagcacaattggaatccaccctgtctgtgcagagctg
caccgtggaagcgggactgagcgagcaagtgaagtggcagatccagttatgtggctggtg
aggtgcatgagaggagatgatagtggccggaggtgtggcagtggaaatggagtgacacgg
ttatatttgagggcagagttgatagtacttggcagctggctgggaatgggaagagggaga
gctgaagaccactcaggtttgtgtcctgcagcaggaagtaatagcaagagcagactcgag
gtgacagcgaggacgaaaccactgatgtgtgtgagggcctgctgtgtgctgggtattcac
aacattgtctgtgaccaagcgctctggggcaagcatcctccaggctggctgctgaggtta
agccccagtgtggatgctgttgccaagactgcaaaccactggctcgtttccgtgcccaaa
tccaaggcgaagttttctagagggttcttgggctcttggcacctgcgtgtcctgtgctta
ccaccgcccaaggcccccttggatctcttggataggagttggtga

>gi568815586f:104165309_104365836|GENSCAN_predicted_peptide_10|223_aa
MPPDITKCPLPGKIALVEDHCSGTVRKDRKTQLEAETLTKKAQKRLGPLCLYCYIQGNGG
SGQVITDVYLHPERTYHLDAVPPHAAWGAWVQNGAQRWPAFERFSFCLHAPPSPEPGLHP
CFRLPGVCLERPFLAPVFLDLNLTIPHHGQGPQDPQGILRQLCSSVGPSYSCRLPSAQPQ
SAPENLPLHLLTSVPGMRFSPDICLIEEAKCHLLTEVFPDHLN

>gi568815586f:104165309_104365836|GENSCAN_predicted_CDS_10|672_bp
atgcctccagacatcactaaatgtcccctgccaggcaaaattgccctggttgaggatcac
tgctctggtacagtaaggaaggacagaaagacccagttggaggcagagaccctgaccaaa
aaggctcagaagcgtttggggcctctctgtctctattgctacatccaagggaatggcggt
tcaggtcaggtcataactgatgtgtatttgcatccagaaagaacgtatcacctggatgcc
gtccctccccatgctgcatggggggcgtgggtgcagaacggtgcccagcgttggcctgcg
tttgagcgcttctctttctgtctccatgcccctccaagccccgaacctggactacatcca
tgctttcgcttgccaggggtctgcctggagcgtcctttcctcgcccctgtgtttctagat
ctaaacctcaccatccctcatcatggacagggtccccaggatccccagggaatcctcagg
cagctctgttccagtgtgggcccctcctatagctgcaggctgccctcagcccagccccag
agtgctcctgagaacctgcctttgcacttgctgacctctgtgcctggaatgcgcttttcc
ccagatatctgcttgatagaagaagccaaatgtcaccttctcactgaggtcttccctgac
caccttaattaa