GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:59:40

Sequence gi568815585r:94611222_94812049 : 200828 bp : 40.07% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    353    653  301  1  1   92  -57   248 0.792   6.93
 1.02 Intr +    969   1169  201  1  0   49   99   198 0.743  15.34
 1.03 Intr +   7929   8109  181  1  1  117   93     2 0.505   1.60
 1.04 Intr +   8247   8296   50  0  2   80   82    34 0.400  -0.59
 1.05 Intr +   9883  10014  132  2  0   44   94    57 0.557   1.60
 1.06 Term +  13039  13271  233  2  2   27   39   236 0.724   8.25
 1.07 PlyA +  15726  15731    6                               1.05

 2.03 PlyA -  16505  16500    6                               1.05
 2.02 Term -  19966  19657  310  0  1   75   44   225 0.994  10.35
 2.01 Init -  26651  26503  149  2  2   83   75    50 0.844   2.81
 2.00 Prom -  26828  26789   40                              -4.75

 3.03 PlyA -  27194  27189    6                               1.05
 3.02 Term -  30502  30249  254  2  2   76   49   206 0.792  10.32
 3.01 Init -  44236  44176   61  1  1  104   57    21 0.355   2.07
 3.00 Prom -  59363  59324   40                              -4.65

 4.06 PlyA -  59661  59656    6                               1.05
 4.05 Term -  69941  69838  104  0  2   95   48    86 0.244   2.76
 4.04 Intr -  70764  70644  121  0  1   34  113    16 0.323  -2.15
 4.03 Intr -  77032  76916  117  1  0   81   72    87 0.833   6.14
 4.02 Intr -  79701  79522  180  0  0  -24   62   162 0.339   1.54
 4.01 Init -  81240  81175   66  0  0   62   88     5 0.285  -0.98
 4.00 Prom -  84851  84812   40                              -2.95

 5.03 PlyA -  87054  87049    6                               1.05
 5.02 Term -  88668  88478  191  1  2  129   44   162 0.985  12.53
 5.01 Init -  89381  89324   58  2  1   19   89   104 0.709   5.12
 5.00 Prom -  89751  89712   40                              -8.95

 6.00 Prom +  89762  89801   40                             -13.30
 6.01 Init +  90509  90994  486  1  0   89   27   303 0.457  17.63
 6.02 Intr +  91458  91759  302  2  2   -2   86   293 0.545  14.71
 6.03 Intr +  92246  92364  119  2  2  118  100    88 0.958  12.19
 6.04 Term +  94219  94499  281  2  2    7   48   240 0.040   6.52
 6.05 PlyA +  94761  94766    6                              -0.45

 7.00 Prom +  95307  95346   40                              -4.05
 7.01 Sngl +  96789  97193  405  2  0   73   39   270 0.998  16.63
 7.02 PlyA +  97946  97951    6                               1.05

 8.08 PlyA -  98429  98424    6                               1.05
 8.07 Term - 100919  99998  922  1  1  -66   46  1261 0.588  97.17
 8.06 Intr - 101391 101112  280  1  1  139   50   178 0.630  14.71
 8.05 Intr - 102260 102187   74  1  2  111   68    59 0.905   4.33
 8.04 Intr - 102595 102407  189  0  0   93    6   188 0.817   8.88
 8.03 Intr - 102753 102638  116  0  2   73   96    57 0.610   3.33
 8.02 Intr - 110787 110695   93  0  0   -6  116    80 0.002   0.64
 8.01 Init - 127137 126946  192  0  0   69   91    92 0.648   6.61
 8.00 Prom - 135783 135744   40                              -3.05

 9.09 PlyA - 135819 135814    6                               1.05
 9.08 Term - 147703 147160  544  0  1   -5   49   406 0.352  20.15
 9.07 Intr - 148105 148002  104  1  2  -65   63   106 0.020  -9.15
 9.06 Intr - 152523 152409  115  2  1   81  106    86 0.233   9.23
 9.05 Intr - 187368 187272   97  1  1   27   54   153 0.091   3.95
 9.04 Intr - 188284 188161  124  1  1   23   64    74 0.807  -2.26
 9.03 Intr - 188883 188639  245  1  2  123   68   110 0.567   8.79
 9.02 Intr - 189653 189604   50  1  2  103   87   -25 0.427  -3.69
 9.01 Init - 191336 191266   71  2  2   83   65    91 0.870   6.87

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 114256 114456  201  0  0   50   45   136 0.863   1.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_1|365_aa
MVARLGTFLKNAWAREPVLVVSFIIGSLAVILPPLSPYTKYFIMIYETMPYNYPLPVRND
GNMTNVPGHPQDPQSSSLEWLKKLSTSTDRGGPSHRSQYELTMNQTEHNLTVSQIPSPQT
WHVFYADKYTCQDDKENSQVEDIPFEMVLLNPDAEGNPFDHFSAGESGLHEFFFLLVLVY
FVIACIYAQSLWQAIKKGGPMHMILKVLTTALLLQAGSALANYIHFSSYSKDGIGVPFMG
SLAEYVILTFESMHGLDNSQNEEVSKQTSPVGFYACIHWHCSIHCHDTALRTSILIRLIL
FRQPTLSRVIGRYSEAAMEGEPDSCFIPSVEHCKAAAAAALRTNFRLLSARQEDVILPLS
FSEGQ

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_1|1098_bp
atggtggcgagacttggcactttcctcaagaatgcctgggccagggagccagtgctggtt
gtgtccttcatcattggtagcctagctgtaattctgcccccactcagcccctacaccaag
tacttcatcatgatctacgagaccatgccctacaactacccattgcccgtccgcaatgat
gggaacatgaccaatgtgcccggccacccccaggatccccagagctccagcttggagtgg
ctgaagaaactgagcacctccactgacagaggaggcccctcccatcgctcccaatacgaa
ttgaccatgaaccagaccgaacataatctgacagtgtcccagattccgtctccacaaacg
tggcatgtgttttatgcagacaagtatacatgccaagatgacaaggagaattctcaggtg
gaagatatcccatttgaaatggtgttactaaacccagatgccgaagggaatccatttgat
cattttagtgctggagaatctgggttacatgagttctttttcctcctagtcctagtgtac
tttgtgattgcttgcatttatgctcaatcattgtggcaggctattaagaaaggcggaccc
atgcacatgattttaaaggttctgacaactgcattgctgttacaagctggttcagcttta
gctaattacattcatttctccagttactccaaagatggaataggggtaccatttatggga
agtttggcagaatatgttatacttacttttgagtctatgcatgggttggacaatagtcag
aatgaagaagtctcaaagcagacctctccagtgggattctacgcctgcatccactggcat
tgcagtattcattgtcatgacacagccctgcgaaccagcattctgatcagactgattctg
ttcaggcagcccaccttgtccagagttattggccgttattctgaggcagctatggaagga
gagccagattcctgctttattcctagtgttgagcattgcaaagctgctgctgctgcagcc
ctaagaaccaacttcaggcttctgagcgcaagacaagaagatgtcatcctgcctttgagt
ttttcagagggacagtag

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_2|152_aa
MDEAGNHHSQQTASRTENQTPHVLTHRWKLNNENTWTQKGEHHTPRPVVSVNDGVVQQKL
APFVRVKRTPGPGAREAEGAIPAGTGVPVGLAVVPQAKRSQQISNNVDKLQQCLVPCALS
GPSSYKKNADLAATLLLPSISCIKHFLWPTLS

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_2|459_bp
atggatgaagctggaaaccatcattctcagcaaactgcctcaaggacagaaaaccaaaca
ccgcatgttctcactcataggtggaaattgaacaatgagaacacttggacacagaaaggg
gaacatcacacaccgagacctgtcgtgagtgtgaatgatggagttgtccagcagaagctg
gcaccctttgtcagagtaaaacgcacacctggcccaggagccagagaagctgaaggagcc
attccggcaggaactggtgttcctgtgggcctggctgttgtcccacaggccaagagaagc
caacagataagcaataatgtggataagctgcaacagtgccttgtgccttgtgccttgtct
ggcccttcctcttacaaaaagaatgcagatctggctgctactttacttctgccttctata
tcttgtatcaaacatttcttatggcctacattgtcctga

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_3|104_aa
MGNLPMEHPPCTYTILLPFVVFTRANVFEIMQFRHVTAVEIQHKLELTVVYHQESEKLKQ
HYDKEEKYEKYGEDKGQEILPYRLKAEPWRETSGLEQTVILLAH

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_3|315_bp
atggggaacctgcccatggagcatccaccctgcacatataccattttattaccctttgtg
gttttcactagagccaatgttttcgagataatgcagtttagacatgtcacagctgttgaa
attcagcataagcttgagctgacagtggtgtatcatcaagaatcagaaaaactaaaacaa
cattatgataaagaggagaagtatgaaaaatacggagaagacaaagggcaggaaatattg
ccttaccgacttaaagcagagccctggagggaaacatctggtttggagcaaacagtgatt
cttttagcacactga

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_4|195_aa
MTSHLTQCKSTSSQCPHALHWKTDNNVNFRSSFYGSPNPPLCDVYPLIRALLLGAVENET
TLRSKQLLKPVIMFPLNLLFLKVSVDIMGPAEYCLSRVEFFSVLKSLAAWIELHQKWGAR
RSDQKQNKRKSTSRHWHKVTFTCKEAVPGDCQSGLSKVPSQAPSVLKPRKAECFPRIVDF
LLVFSVQCVTTAEVE

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_4|588_bp
atgacttctcatcttactcagtgcaaatctacatcttcacaatgcccacatgccctacac
tggaagacagacaataatgtgaattttcggtcttccttttacgggagcccaaatccacct
ctctgtgacgtttaccctttaatacgagctctgctcttgggagcagtggagaatgaaacg
actctccgttccaaacagcttttgaagccagttatcatgttccctctcaatcttctcttt
ctaaaggtttctgtggacataatgggtcctgcggagtattgcctctcaagagttgagttt
ttcagtgttctgaagtctctggctgcatggatagaacttcatcagaagtggggtgcaagg
aggtctgaccaaaaacaaaacaaaagaaagtctacctcacggcactggcataaagtcacc
ttcacatgcaaggaggctgtgcctggggactgccagtctggcctttctaaggtgccctca
caagctccttccgtcctgaaacccagaaaagcagaatgctttccacgtattgttgacttt
ctccttgtgttttctgttcagtgtgtgacaacagcagaggtagaatga

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_5|82_aa
MFEVNDFRKMSEIHAGKSSALVLREASCSMERPTGQELMYLAKGQQRLEACQQLSEKVTR
SNLEMTTAPGGTLIAALEETLS

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_5|249_bp
atgtttgaagtcaatgactttcgaaaaatgagtgaaatccacgcaggaaaatccagcgct
cttgttctaagggaagcaagctgctccatggaaagacccacagggcaagagctgatgtat
ctggccaaaggacagcaaagacttgaggcctgtcagcagctaagtgaaaaagtcacccga
tcaaaccttgagatgactacagccccaggtggcaccttgattgcagctttggaagagacc
ctgagctag

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_6|395_aa
MHVFCEALPTFPALLCAPHSPERAVLGILRSRLLRLVVWAEVAAQGGTWGLVGFAVAGVC
RLEEGLKAHGSLIPPSLRLLAETLSCAGVGGHPIPPRPRPVTQCVHMRAERQRPGGHGWG
RVVKLPKPTHTLSFDTSRRFQRRRHGGFRETSRKGDFSKREMVDPQSRPHLERAASQFRL
PAPQRSSGSGEPSRRALMFIHAALSSRAPIHINQPLDLHKSKFTGENLVPEKEEQQSGQA
VGAFVPPAPSPTSPKLGSCCEGGEELCGGVSVGNPGVLRRLLIFRQSRHSSALGVPSAGE
PEVRSSADNDWKVRRLGGPATRRPGEQPSKIKQLLSLAAKASMDASRAAQGTKGHPRSLR
VRALPRGGQEVLCPMRFSQGQGAGRGKGQEPRRET

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_6|1188_bp
atgcatgtcttttgcgaagcccttcccaccttcccagcgctgctctgtgccccgcacagc
ccggagcgcgcagtcctggggatactaagaagccgactacttagactcgtggtgtgggcg
gaggtggcagcccaaggtgggacgtggggccttgttggttttgcagtagcaggagtctgc
aggcttgaggaaggccttaaggcccacggaagcctcatcccgccaagccttcgcctcctc
gctgagactctgagctgcgctggggttggcgggcacccgattccgccccggcccagaccg
gtcactcagtgtgtgcatatgagagcggagagacagcgacctggaggccatgggtggggg
cgggtggtgaagctgccgaagcctacacatacacttagctttgacacttctcgtaggttc
caaagacgaagacacggtggcttcagggagacaagtcgcaagggcgacttttccaagcgg
gagatggtggacccgcagtcccgcccgcatctggaacgagctgcttcgcagttccggctc
ccggcgccccagagaagttcggggagcggtgagcctagccgccgcgcgctcatgtttatt
cacgcggccttgagcagccgagctccaatccatattaatcaaccgctcgacctacacaag
tctaagtttacgggagaaaacctagtccccgaaaaggaagaacagcaatccggacaagca
gttggcgcctttgtcccgccagccccttctccaaccagcccaaagttgggcagctgctgc
gaaggaggggaggaactttgcggaggggtcagtgttgggaaccctggggtcctccgccgc
ctcctgatcttccgccagtcccgccactcctccgccctgggcgtgccttccgcaggtgaa
cctgaagttaggagcagcgctgataacgactggaaagttcgacggctgggtgggcccgcg
acccgcaggcctggcgagcaaccatcgaaaataaaacaattgctgtccttggcggcaaag
gcctctatggacgcctccagggcagcgcagggaaccaaagggcaccccagatctctgcgg
gttcgcgccttgcctcgtgggggacaggaggttctctgtcccatgaggttcagtcaagga
caaggagccgggaggggaaaggggcaggagccaaggagagaaacctga

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_7|134_aa
MEIEIASQQQLSAQSQRCICGPLSDAYTTHPRAFLYALLPRSRSPRSNPLLLHSLTWQEA
LCRRKTRQLVSKTIGVRMGDKRVCGACGGPQTAAQSVGDMTSVLPLGILTPPLTHLSSPL
LIHQQLRSVSPRKR

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_7|405_bp
atggagatagagatcgcgagccagcagcagctctctgcccaatcacagcgctgcatttgt
gggccactttcagacgcttacaccacccacccccgggcctttctctacgccctcttgccc
cggagccgctccccccgctccaaccccttacttctgcacagtctaacttggcaggaggct
ctctgcaggcgcaaaacccgccaacttgttagcaagaccattggagtcagaatgggtgat
aaacgagtctgtggggcctgtggaggtcctcaaacagccgcacaatctgttggcgatatg
acctcggtgctccccctcggcatcctcacccctcctcttacccatctttccagtcctctt
ctcattcatcaacaactccggagcgtttctcccagaaaacgctga

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_8|621_aa
MKEGRKEGRKEGRKEGRKEGRKEGRKEGKRKRKKERKKERKKERKKERERKKERERKKEI
YYILLCRTLIRKKTKTPTITNSVQQQTEESRQCSKVHRQCKKMREASVSVASNTWTSKEN
EHFLARNSLKHFQGWRGSPTRARRLLPPGEDSRATTRAAARQAGLGSRDDTRVCQRQTGR
RLPGALRTLHSPKPALKPPDIHTQPRLDMHTQCRLRARTHAGPPPRLPHPHLLLSNEKVT
EENPNTPAAESPLWHLAARGGGLLGSTSRSLRDATFGDALHLRENDRGGGALCPAAATCG
ELTSKRHCRRRTQRTGSPRAANIDFLRAEGEGPGGGGLQPRQGESMSKPVDHVKRPMNAF
MVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDY
KYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPALKAGAGLHAGAGGGLVPESLLANPE
KAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMAEISSSSSGLPYASSL
GYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNCSAWPSPGLQPPLAYI
LLPGMGKPQLDPYPAAYAAAL

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_8|1866_bp
atgaaagaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaagga
aggaaggaaggaaggaaggaaggaaaaagaaaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagagaaagaaagaaagaaagggaaagaaagaaagagatt
tactacatcttgctatgccgtacgttgatcaggaaaaagacaaagacacctaccatcacg
aattctgttcagcaacaaactgaagaatctagacagtgcagtaaggtgcatcgccagtgc
aagaaaatgcgagaagcctctgtttctgttgcaagcaacacctggacctccaaggaaaat
gagcactttcttgctaggaacagtctcaaacattttcaaggctggagaggctctcctact
cgtgcccgccgccttcttcctcccggcgaggattccagggccacaaccagggcagctgca
cgccaggccggcctgggtagccgggatgacaccagggtttgccaacgccaaacagggcgc
agactccccggcgcgctccggactctccactcgcctaaacctgctctcaagcccccagat
atacacacacagccgcggctggacatgcacacccagtgccggctccgggcgcgcacacat
gcagggccacctccccgccttccccacccccatctgcttctgtcaaatgagaaagtcacc
gaggagaacccaaacactccagccgctgagagccccctttggcacttggcagcacgcggc
ggcgggctcctcggctcaacttcgaggagtctccgcgacgcaacttttggggacgctttg
catttaagagagaacgaccgaggaggaggagcgctctgcccggccgccgctacctgcggg
gagctcaccagcaaacgccactgcagacgaaggacccaaagaaccgggtctccgcgggca
gccaacattgatttcctccgggccgagggcgagggcccgggaggcggcgggctgcagccg
cggcagggcgagagcatgtccaagccggtggaccacgtcaagcggcccatgaacgccttc
atggtgtggtcgcgggctcagcggcgcaagatggcccaggagaaccccaagatgcacaac
tcggagatcagcaagcgcttgggcgccgagtggaaactgctcacagagtcggagaagcgg
ccgttcatcgacgaggccaagcgtctacgcgccatgcacatgaaggagcaccccgactac
aagtaccggccgcggcgcaagcccaagacgctgctcaagaaggacaagttcgccttcccg
gtgccctacggcctgggcggcgtggcggacgccgagcaccctgcgctcaaggcgggcgcc
gggctgcacgcgggggcgggcggcggcctggtgcctgagtcgctgctcgccaatcccgag
aaggcggccgcggccgccgccgctgccgccgcacgcgtcttcttcccgcagtcggccgct
gccgccgccgctgccgccgccgccgccgccgcgggcagcccctactcgctgctcgacctg
ggctccaaaatggcagagatctcgtcgtcctcgtccggcctcccgtacgcgtcgtcgctg
ggctacccgaccgcgggcgcgggcgccttccacggcgcggcggcggcggctgcagcggcg
gccgccgccgccggggggcacacgcactcgcaccccagcccgggcaacccgggctacatg
atcccgtgcaactgcagcgcgtggcccagccccgggctgcagccgccgctcgcctacatc
ctgctgccgggcatgggcaagccccagctggacccctaccccgcggcctacgctgccgcg
ctatga

>gi568815585r:94611222_94812049|GENSCAN_predicted_peptide_9|449_aa
MHGHTGCDDVVNMMMMVSCSASWRKEHREKCLSKVIMNSIDFLLFSFLENLLQKSASLPF
MGTQTPLKSDPNYGLTLRNMSIHSKPCRNFQKVQEAFETHVRPPIKNLRMFSNDTEQEKI
RQFYADSGGSYRYLRNSYPHVWAVATTKFVLPRAYDWLAPDSHEAEKLTVVHVEVQPSAE
WVFSSSHEEPPLEGVWAWVSHTMVAGNIPSRPVPMYKQLTEPLLALFANDPSAKLRCVPA
PGSGGGHRGQLDRGKKHKERKSDKHFYEGSLAKQEEVEQTPLQEALNQLMRQLQRKDPSA
FFSFPVTDFIAPGYSMIIKHPRDFSTMKEKVKNNDYQSIELKDNFKLMCTNAMIYNKPET
IYYTAAKKLLHWGMTILSQERIQSLKQSIDFMADLQKTRKQKDRTDWGGWRQSGEDEGCW
PRERGLWRCRSTSLPESRQRKLKYRQRYA

>gi568815585r:94611222_94812049|GENSCAN_predicted_CDS_9|1350_bp
atgcacggtcacactggctgcgacgatgtggttaatatgatgatgatggtgtcatgcagt
gcaagctggaggaaggaacatagggagaaatgcctctcaaaagtaatcatgaattctatt
gattttctgctcttctctttcctggaaaatttgttgcaaaagagcgcttctttgccattt
atggggacacaaacccctttgaaatctgatccaaactatggactcactctcagaaacatg
agcatacactcaaaaccttgcagaaattttcagaaggtccaggaagcctttgaaactcat
gtaagacccccaattaagaacctccgaatgttctccaatgacactgaacaagaaaaaata
agacagttttatgctgactctggaggaagttacagatatttgagaaattcttatcctcat
gtttgggcagttgccacaacaaaatttgttctgcctcgtgcctatgattggcttgcccct
gatagccatgaagctgaaaaacttacagtggttcacgtggaagttcagccaagtgctgag
tgggtcttctcttctagccatgaagaaccgccgttagaaggagtgtgggcttgggtttct
catactatggtggctgggaacattccaagcagaccagtcccaatgtacaagcagcttact
gagcctctgcttgcactgtttgccaatgacccatcagccaaactgcgctgcgtgcctgct
cctggctctgggggcgggcaccggggccagctggacaggggcaagaagcacaaggagcgc
aagtcagacaaacacttctatgagggctctttagccaaacaagaagaagtagaacagaca
ccccttcaagaagctttgaatcaactgatgagacaattgcagagaaaagacccaagtgct
ttcttttcatttcctgtgactgattttattgctcctggctactccatgatcattaaacac
ccaagggattttagcactatgaaagaaaaggtcaagaacaatgactaccagtcgatagaa
ctaaaggataacttcaaactaatgtgcactaatgccatgatttacaacaaaccagagacc
atttattatacagctgcaaagaagctgttgcactgggggatgactattcttagccaggaa
agaattcagagcctgaagcagagcatagacttcatggctgacttgcagaaaactcgaaag
cagaaagatagaacagactggggaggatggaggcagagtggggaggacgaaggctgctgg
cccagggagagaggactctggagatgccgaagcacaagccttccagagtcccggcaaaga
aaattaaaatatagacaaagatatgcttga