GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:23:53

Sequence gi568815585r:47977142_48190405 : 213264 bp : 40.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   2631   2523  109  2  1   91   87    23 0.013   1.87
 1.03 Intr -  11840  11741  100  0  1   73   99    92 0.456   7.05
 1.02 Intr -  19882  19702  181  1  1   89   47   199 0.191  14.42
 1.01 Init -  24128  23991  138  2  0   82   72   123 0.405  10.40
 1.00 Prom -  27598  27559   40                              -5.85

 2.00 Prom +  29414  29453   40                              -7.15
 2.01 Init +  32938  33063  126  0  0   57  100   131 0.898  11.41
 2.02 Intr +  34664  34802  139  1  1   44   99     9 0.050  -3.28
 2.03 Term +  38748  39838 1091  1  2   23   49   332 0.022  14.06
 2.04 PlyA +  40655  40660    6                               1.05

 3.00 Prom +  47295  47334   40                              -4.95
 3.01 Init +  54752  54898  147  1  0   75   65   110 0.826   7.54
 3.02 Intr +  60587  60843  257  1  2   32   29   328 0.901  16.62
 3.03 Intr +  61837  61941  105  1  0   98   75    73 0.959   5.41
 3.04 Intr +  63779  63975  197  2  2   88   69   152 0.997  11.44
 3.05 Intr +  68519  68631  113  0  2  123   48    80 0.699   6.68
 3.06 Intr +  81723  81801   79  2  1   64  115    86 0.498   7.11
 3.07 Term +  82360  82739  380  2  2   70   39   245 0.438  11.77
 3.08 PlyA +  84341  84346    6                               1.05

 4.13 PlyA -  84457  84452    6                               1.05
 4.12 Term -  90494  90364  131  0  2   51   33   126 0.608   0.76
 4.11 Intr - 100170 100012  159  1  0  102   67   128 0.334  11.14
 4.10 Intr - 102834 102703  132  1  0   73   95   113 0.983  10.20
 4.09 Intr - 104590 104504   87  2  0   72   97    21 0.525   0.42
 4.08 Intr - 106287 106230   58  0  1   37   96    44 0.961  -2.36
 4.07 Intr - 109311 109141  171  0  0   70  119   159 0.998  16.42
 4.06 Intr - 113277 113211   67  2  1   87  111     8 0.958   0.99
 4.05 Intr - 118135 117919  217  2  1   69   69   214 0.170  14.24
 4.04 Intr - 129368 129236  133  2  1   25   61    82 0.032  -1.50
 4.03 Intr - 131409 131218  192  0  0  104   98    18 0.473   3.17
 4.02 Intr - 148750 148629  122  2  2   67   58    98 0.375   3.99
 4.01 Init - 150878 150818   61  2  1   54  119    16 0.478   2.76
 4.00 Prom - 162026 161987   40                              -5.55

 5.00 Prom + 163764 163803   40                              -6.35
 5.01 Init + 173588 173636   49  1  1   65   58    83 0.410   4.16
 5.02 Intr + 181048 181116   69  2  0   19   69   120 0.014   1.44
 5.03 Intr + 189360 189441   82  1  1  119   86    50 0.447   5.68
 5.04 Intr + 205510 205630  121  1  1   11   77   122 0.016   2.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  19882  19664  219  1  0   89   54   219 0.809  14.66
S.002 Sngl +  38732  39838 1107  1  0   58   49   322 0.907  21.92


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:47977142_48190405|GENSCAN_predicted_peptide_1|176_aa
MAASMFYGRLVAVATLRNHRPRTAQRAAAQVMPSSPLSSRGSAGERVLGSSGLFNNHGLQ
VQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKLGSKDVVIKAQVLAG
GRGKGTFESGLKGGVKIVFSTSSAVLNRSGKSGHPCFVSDVRGKAFSFSFLCMMLA

>gi568815585r:47977142_48190405|GENSCAN_predicted_CDS_1|528_bp
atggcggcctccatgttctacggcaggctagtggccgtggccacccttcggaaccaccgg
cctcggacggcccagcgggctgctgctcaggtaatgccttccagtccgctgtcgtctcga
gggtcggcaggagaaagggttctgggaagttctggattgtttaataaccatggactccaa
gtacagcagcaacagcaaaggaatctctcactacatgaatacatgagtatggaattattg
caagaagctggtgtctccgttcccaaaggatatgtggcaaagtcaccagatgaagcttat
gcaattgccaaaaaattaggttcaaaagatgtcgtgataaaggcacaggttttagctggt
ggtagaggaaaaggaacatttgaaagtggcctcaaaggaggagtgaagatagttttctcg
acatctagtgctgtgttgaacagaagcggcaagagtgggcatccttgctttgtttctgat
gttagaggaaaagctttcagcttctcatttttgtgtatgatgttggct

>gi568815585r:47977142_48190405|GENSCAN_predicted_peptide_2|451_aa
MLKFAILKVEGPGDNSVVEVHGRGREISGNEETGVFEGPPRKFRAVLHSSVRTNEYKSLY
SQEKLCKVPLSLTSKVIVSEILWKASSPENPIVSAQNLLKLISNFSKVSGYKINVQKSQA
FLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDEKDLFKENYKPLLNEIKEDTKKWK
NIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMPFFTELEKTTLKFIWNQKRAHITKST
LSQKNEAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKS
DKNKKWGKDSLFNKWCWENWLAICRKLKLDSFLTPYTKINSRWIKDLNVRPKTIKTLEEN
LGNTIQDIGMGKDFMCETPKAIATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIF
ATYSSDKGLISRIYNELKQIYKKKTTPSKSG

>gi568815585r:47977142_48190405|GENSCAN_predicted_CDS_2|1356_bp
atgcttaaatttgctattttgaaggtagaaggtccaggtgataacagtgtcgtggaagta
catggaagaggtagagagattagtggaaatgaggaaactggagtttttgagggccctcca
cggaagtttcgggcagttcttcatagtagtgtgagaacaaacgaatacaaaagtctatac
tctcaagagaagctttgcaaagtgcctctgtccctgacttccaaagtcattgtttcagaa
attctctggaaagcttcctccccagaaaaccccatcgtctcagcccaaaatctcctcaaa
ctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagca
ttcttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcaca
attgcttcaaagagaataaaatacctaggaatccaacttacaagggatgagaaggacctc
ttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaagaaatggaag
aacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaag
gtaatttatagattcaatgccatccccatcaagctaccaatgcctttcttcacagaactg
gaaaaaactactttaaagttcatatggaaccaaaaaagagcccacatcaccaagtcaacc
ctaagccaaaagaatgaagctggaggcatcacactacctgacttcaaactatactacaag
gctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagaccaatggaac
agaacagagccctcagaaataatgccgcatatctacaactatctgatctttgacaaatct
gacaaaaacaagaaatggggaaaggattccctatttaataaatggtgctgggaaaactgg
ctagccatatgtagaaagctgaaactggattccttccttacaccttatacaaaaattaat
tcaagatggattaaagacttaaatgttagacctaaaaccataaaaaccctggaagaaaac
ctaggcaataccattcaggacataggtatgggcaaggacttcatgtgtgaaacaccaaaa
gcaatagcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgc
acagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggagaaaattttt
gcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaacaaatt
tacaagaaaaaaacaaccccatcaaaaagtgggtga

>gi568815585r:47977142_48190405|GENSCAN_predicted_peptide_3|425_aa
MKSGRVKGMRKDSLREKVGPGGQRKYGGCEGPELWKPTLFVGDQTKKQVARPPARYDGQR
TAARAAARSRSRSRGDQLQASALRPPGEEERLGWSWQFPTPWRSSGVRVSSRGREETGAC
AEGRTHAVLASVCRAVLEEEREQAIQVTDAALIHPLVSSGHDIHMCAFSGETWEECAQRE
TWEEAALHLKNVHFASVVNSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWV
PWEELPPLDQLFWGLRCLKEQGYDPFKEDLNHLLKTDTARSPRKPTGPSQTLWVTLTVEE
PDKPYKLVQDLRLINQIVLPIHPVVPNPYTLLSSIPPSTTHYSVLDLKHAFFTIPLHPSS
QPLFTFTWTDADTHQAQQFTWAVLPQAFTDSPHYFSQAQISSSSVTCLGVILIKTHVHSL
LIVSD

>gi568815585r:47977142_48190405|GENSCAN_predicted_CDS_3|1278_bp
atgaagtccggcagagtcaaaggaatgagaaaagacagtttgagagagaaagtgggtcca
gggggccaacgcaagtatggaggctgtgaaggccctgagctctggaagcccacgctattt
gttggtgatcaaacaaagaaacaggtggcgcgtcctcccgcgcgctatgacggccagcgc
acagccgcgcgggcggcggccaggagtcggagtcggagtcgtggtgaccagctgcaagca
tccgcgttgcgtcctcctggggaagaggaaaggctcggttggagctggcagtttccaact
ccctggaggtcatctggagttcgggtgagcagccgcggacgcgaggaaaccggggcgtgc
gcagagggacgaactcacgccgtgcttgcttccgtgtgccgtgctgtgttggaggaggag
agagagcaagccattcaggtgactgatgctgctctgatccatccattggtgtcctctggg
catgatatccacatgtgtgctttctcaggtgaaacctgggaagaatgtgctcaaagggaa
acctgggaagaagcagctcttcacctgaaaaatgttcactttgcctcagttgtgaattct
ttcattgagaaggagaattaccattatgttactatattaatgaaaggagaagtggatgtg
actcatgattcagaaccaaagaatgtagagcctgaaaaaaatgaaagttgggagtgggtt
ccttgggaagaactacctcccctggaccagcttttctggggactgcgttgtttaaaagaa
caaggctatgatccatttaaagaagatctgaaccatctgctgaagactgacactgcccga
tcgcctcggaagcctacaggaccatcacagacactctgggtaactctcacagtggaagaa
ccagacaagccttacaagttagttcaggatctgcgccttatcaaccaaattgttttgcct
atccaccccgtggtgccaaacccatatactctcctatcctcaatacctccctcaacaacc
cattattctgttctggatctcaaacatgctttctttactattcctttgcacccttcatcc
cagcctctcttcactttcacttggactgacgctgacacccatcaggctcagcaatttacc
tgggctgtactgccacaagccttcactgacagcccccattacttcagtcaagcccaaatt
tcttcctcatctgttacctgtctcggtgtaattctcataaaaacacatgtgcactccctg
ctgatcgtgtctgactga

>gi568815585r:47977142_48190405|GENSCAN_predicted_peptide_4|509_aa
MHGKKETPKNISKFSTVSISGEWNVLGEAEALEFEVKESKEGSVHDLKRYFLLVKMLTGH
LDLIQDTTLPLVTVSPLAPLGCQFLRASLFLMALNILKSMGQVFCRKPFTWDLSDGVRVW
RKTPKFRYSSPLNLLWKLDPQCWRRSLGEGVWIMWQIPHELLGGILLVMRFGPESPRRPN
RWRRCPQCASRPKGGALARPLFPLLGDSSAFRARLLATHLRQLALRVRRWRDSGENGCVF
EWELIEMLAISRNQKLLQAGEENQVLELLIHRDGEFQELMKLALNQGKIHHEMQVLEKEV
EKRDSDIQQLQKQLKEAEQILATAVYQAKEKLKSIEKARKGAISSEEIIKYAHRISASNA
VCAPLTWVPGDPRRPYPTDLEMRSGLLGQMNNPSTNGVNGHLPGDALAAGRLPDVLAPQY
PWQSNDMSMNMLPPNHSSDFLLEPPGHNKENEDDVEIMSTDSSSSSSHALKDVKQDGGLQ
RSLLLTIQKVMQSTPDWLQLKTNLTDPFS

>gi568815585r:47977142_48190405|GENSCAN_predicted_CDS_4|1530_bp
atgcatgggaaaaaggaaaccccgaaaaatataagcaaattctcaactgtgagtatttct
ggagagtggaatgtccttggagaggccgaggcactggaatttgaagtgaaagaaagtaaa
gagggctctgttcatgacttaaaacgttatttccttcttgtcaagatgcttactggccac
ctggatctcattcaggacaccacattaccattagtcacagtgtctcctctggctcctctt
ggctgtcagtttctcagagcgtccttgtttttaatggccttgaatattttgaagagtatg
ggtcaggtgttttgtagaaagcccttcacttgggatttatctgatggagttagagtttgg
aggaaaaccccaaagtttagatattcatcccctctaaatctcttgtggaaacttgatcct
cagtgttggaggcggagcctcggagaaggtgtttggatcatgtggcagatccctcatgaa
cttcttggtggcatcctcctggtaatgaggtttggaccagaaagccctcgccggcccaac
agatggcgccggtgtccgcagtgcgcctccaggcccaaagggggcgctctcgccaggcct
ctttttcctctcctgggtgactcttccgccttccgagcccgccttctcgccacgcacctg
cgtcagctcgctctgcgcgtgcgccggtggcgggactctggggaaaatggctgcgtcttc
gagtgggaacttatagaaatgctggcaatttcaagaaaccaaaagttgttacaggctgga
gaggaaaaccaggtcctggagttgttaattcaccgagatggggaatttcaagaactaatg
aaattggcacttaatcagggaaaaattcatcatgaaatgcaagttttagaaaaagaagta
gagaagagagacagtgatattcagcagctacaaaaacagctaaaggaagcagaacaaata
ctggcaacagctgtttaccaagcgaaggagaaactcaagtcaatagaaaaagcaagaaaa
ggtgctatctcctctgaagaaataattaagtatgcacataggatcagtgcaagtaatgct
gtatgtgctccactgacctgggttccaggggacccccggagaccctacccaactgattta
gagatgagaagtgggttactgggtcagatgaacaatccttccactaatggcgtgaatggc
catttaccaggagatgcacttgcagcaggaagattgccagatgtccttgctccacagtat
ccatggcagtcaaatgacatgtcgatgaatatgttaccaccaaatcatagtagtgacttt
ttgttggaacctcctgggcataataaagaaaatgaagatgatgtagagattatgtcaacg
gactcctcaagcagtagtagtcatgctctcaaggatgtaaaacaagatggaggcctgcag
cgaagtttgctgctgactatacagaaagtcatgcaaagcacaccagattggctacagctt
aagacaaaccttacagatcctttttcatag

>gi568815585r:47977142_48190405|GENSCAN_predicted_peptide_5|107_aa
MGPQAKGCGQPLEVGKENKNESSDRARNSGKRADRQRAGGDLKIWNNSQPGAYSAATAAA
GRTLSLGMSERDLLEALRRMKYQFEKSLYQSNMNSAKIEERANIKLM

>gi568815585r:47977142_48190405|GENSCAN_predicted_CDS_5|321_bp
atggggccacaagccaagggatgtggacagcctttagaagttggaaaagaaaataagaat
gaaagctctgacagagccaggaacagtggcaagagagctgatcggcaaagagcaggtggt
gacttgaaaatttggaataattcacaacctggtgcttattcagcagcaacagcagcagca
ggcagaactctgagtttgggcatgtctgaacgggatctccttgaggcactaagaaggatg
aaatatcagtttgaaaagagcctctatcagagcaacatgaattctgctaaaattgaagaa
agagcaaatatcaaattgatg