GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:38:37

Sequence gi568815585r:45683386_45951629 : 268244 bp : 43.47% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   2175   2170    6                               1.05
 1.01 Sngl -   4664   4323  342  2  0   97   34   311 0.956  22.63
 1.00 Prom -  14922  14883   40                              -3.06

 2.00 Prom +  15576  15615   40                              -5.56
 2.01 Init +  25993  26010   18  0  0  113   75    13 0.627   2.63
 2.02 Term +  29797  30987 1191  0  0  113   54  1966 0.989 187.43
 2.03 PlyA +  31138  31143    6                               1.05

 3.03 PlyA -  31614  31609    6                              -0.45
 3.02 Term -  32017  31818  200  2  2   68   39   140 0.212   4.66
 3.01 Init -  47788  47653  136  1  1   57  113    40 0.147   3.71
 3.00 Prom -  63091  63052   40                              -3.76

 4.05 PlyA -  63943  63938    6                               1.05
 4.04 Term -  71800  71298  503  2  2   43   39   293 0.510  14.54
 4.03 Intr -  72756  72470  287  2  2   54  -32   205 0.435   2.09
 4.02 Intr -  73501  73374  128  1  2   67   84    72 0.326   4.18
 4.01 Init -  83836  83690  147  1  0   57   73    77 0.388   3.19
 4.00 Prom -  86320  86281   40                              -1.26

 5.03 PlyA -  86982  86977    6                               1.05
 5.02 Term - 100672  99998  675  1  0  130   54   424 0.668  36.92
 5.01 Init - 105889 105791   99  1  0   71   43    46 0.248  -1.34
 5.00 Prom - 120198 120159   40                              -1.56

 6.00 Prom + 122224 122263   40                              -3.36
 6.01 Init + 123152 123285  134  1  2   71   -7    89 0.238  -2.69
 6.02 Intr + 126778 126933  156  1  0   94   68    98 0.394   7.53
 6.03 Intr + 133357 133414   58  1  1   42   45   108 0.090   0.79
 6.04 Intr + 134651 134786  136  1  1   66   38   109 0.212   3.84
 6.05 Intr + 155430 155620  191  1  2  127   70    84 0.351   9.80
 6.06 Intr + 167848 168087  240  0  0   79   93   106 0.062   7.95
 6.07 Intr + 170291 170318   28  1  1   75  100    -5 0.006  -2.91
 6.08 Intr + 178256 178387  132  0  0   68   84    72 0.963   5.42
 6.09 Term + 181241 181395  155  0  2  136   53    83 0.984   7.68
 6.10 PlyA + 182863 182868    6                               1.05

 7.09 PlyA - 183139 183134    6                               1.05
 7.08 Term - 185204 185174   31  1  1  117   43     7 0.167  -3.57
 7.07 Intr - 189607 189515   93  0  0   62  121    22 0.327   1.98
 7.06 Intr - 190873 190744  130  2  1   31  100    78 0.294   3.05
 7.05 Intr - 193406 193242  165  0  0   43  119    33 0.101   1.83
 7.04 Intr - 213495 213381  115  0  1   84   84   109 0.643  10.12
 7.03 Intr - 225235 225146   90  1  0   49   80    72 0.062   2.69
 7.02 Intr - 227486 227374  113  0  2   95   79    14 0.070   1.30
 7.01 Init - 227687 227636   52  2  1   78   99    17 0.069   2.22
 7.00 Prom - 233100 233061   40                              -3.16

 8.02 PlyA - 233782 233777    6                               1.05
 8.01 Sngl - 236251 235922  330  1  0   39   36   282 0.982  14.12
 8.00 Prom - 237259 237220   40                              -6.16

 9.03 PlyA - 241363 241358    6                               1.05
 9.02 Term - 250343 250239  105  2  0   86   49    56 0.271  -0.09
 9.01 Init - 258197 258036  162  2  0   70  113   104 0.876   8.84

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_1|113_aa
MEELANAIGISTFNHLQVERILNKPGSKCKLAVNQIQCHPYLTQEKFIQYCQSKGITVTA
CSCLGSPDKPRAKPKDPSLLEDPRIEAITANRNKTTAQILIRFPMQRSLVVIP

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_1|342_bp
atggaagagctggcgaacgctattggcatctccaccttcaaccatctgcaggtcgagagg
atcttaaacaagcctggctcaaagtgtaagctggcagttaaccagattcagtgtcacccg
tacctaactcaggagaagtttatccagtactgccagtccaaaggtatcacagtgactgcc
tgtagctgccttggctctcctgacaagccccgggccaagcccaaggacccttccctactg
gaagatcccaggatcgaagcaatcacagccaaccggaataaaactacagcccagattctg
atccggttccccatgcagaggagcttggtggtgattccctag

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_2|402_aa
MAKYGQRGTAEPFPRLHNLYSTPRCAQQAALPRLSRRMASQHSYPLNRFSSVPLDPMERP
MSQADLELDYNPPRVQLSDEMFVFQDGRWVNENCRLQSPYFSPSASFHHKLHHKRLAKEC
MLQEENKSLREENKALREENRMLSKENKILQVFWEEHKASLGREESRAPSPLLHKDSASL
EVVKKDHVALQVPRGKEDSTLQLLREENRALQQLLEQKQAYWAQAEDTAAPAEESKPAPS
PHEEPCSPGLLQDQGSGLSSRFEEPKGPPARQEDSKELRALRKMVSNMSGPSGEEEAKVG
PGLPDGCQPLQLLREMRQALQALLKENRLLQEENRTLQVLRAEHRGFQEENKALWENNKL
KLQQKLVIDTVTEVTARMEMLIEELYAFMPARSQDPKKPSRV

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_2|1209_bp
atggccaaatatggacagaggggcacagccgaacccttcccgaggctccacaacttgtac
agcacccctcgctgcgcgcagcaggccgccctgccccggctgagccgcaggatggcgagc
cagcactcctatccactgaaccgcttctcctccgtgcctttagaccccatggagcgcccc
atgtcccaggccgacctggagctggactacaacccgccgcgggtgcagctcagcgacgag
atgttcgtgttccaggacgggcgctgggtaaatgagaactgccgcctgcagtctccctac
ttctccccatccgcctccttccaccacaagctgcaccacaagaggctggccaaggagtgc
atgctgcaggaggagaacaagtctctgcgggaggagaacaaggccctgcgcgaggagaac
cggatgctcagcaaggagaacaagatcctacaggtcttctgggaggagcacaaggcctcg
ctgggccgagaggagagccgggccccctcgccactgctgcacaaagacagcgcgtccctg
gaggtggtgaagaaggaccacgtcgccctgcaggtgccccgtggcaaggaggacagcacc
ctgcagctcctccgggaggagaatcgcgcgctgcagcagctgctggagcagaaacaggcc
tactgggcgcaggcagaggacacggccgcccctgccgaggaaagcaagcccgccccctca
ccccacgaggagccctgcagccccgggctgctgcaggaccagggctccggcctctcctcc
cgcttcgaggagcccaaagggcctccggcccggcaggaggactccaaggagctgcgcgcc
ctgcggaagatggtcagcaacatgtccgggccctccggggaggaggaggccaaggtgggc
ccgggcctgcccgacggctgccagcccctgcagctgctgagagagatgaggcaggcgctg
caggccctgctcaaggagaaccggctcctgcaggaggagaacaggaccctgcaggtgcta
cgggcagagcacaggggcttccaggaggagaacaaggccctgtgggagaacaacaagctg
aagctgcagcagaagctggtcattgacaccgtgaccgaggtcaccgcgcgcatggaaatg
ctcatcgaggagctctacgccttcatgccggccaggagccaggaccccaagaagcctagc
agggtctga

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_3|111_aa
MGSDILIMLNSLTSFYHKLYTSSGTIQKQTEVGRKVVTFPTGVQEASEIGDDEGARRIGE
REEEEEKTKEKKEELKEKNRDNNEGRGKEETRGKERRSQIHNCLESNQDVL

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_3|336_bp
atgggcagtgacatcctgatcatgcttaacagtctaacttccttctatcacaaactctac
acttcctctgggacaatccagaaacaaacagaagtgggcaggaaggtggtcacttttccc
actggagtccaagaagcctcagaaattggagatgatgagggagcaagaaggataggagaa
agagaagaggaggaagaaaaaactaaggaaaaaaaggaagaactgaaggagaaaaacaga
gacaataatgaaggcagaggtaaagaagagaccaggggaaaagagagaagaagccagatt
cataattgtcttgagagcaaccaagatgttctttag

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_4|354_aa
MQAPQGQSLKPAVEALLRQGLREPNTGEVKEEVCYHTPGCKNLLLVLINKTDGSWRMTVD
YRKVNQVVIPIAAAVPDVVSLLEQINTSPGTWPYDPADPMVFEVSDRDAVWSLWQALIGE
SQQRPLGFWSKALSSSADNYSPLERQLLAYYWALVETERLTMGHQVTMRPELPIMNWVLS
DPSSHKAATPVIAQWAHEQSGRGGRDGGYAWAQQHGLPLVKARATTECPICQQQRPTLSP
RYGTIPWSDQLATWWQVDYIGPLPSWKWQKFVLTGIDAYSRYGFAYAAHNASAKTTIRGL
MECFVHCHGIPHSIASDQGTHFTAKEVQQWARAYGIHWSYHVPHHPEAAGLLEQ

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_4|1065_bp
atgcaggccccacaaggacaatcactgaagcctgccgttgaagccttgttgagacaaggc
cttagagagcctaacacaggtgaggtcaaggaggaagtctgttaccacactcctggttgt
aaaaacctgctgcttgtacttattaataagacagatggatcttggagaatgacagtggat
tatcgtaaggtcaaccaagtggtgattccaattgcagctgctgtaccagatgtggtttca
ttgcttgagcaaattaacacatctcctggtacctggccatatgacccagcagatccaatg
gtgtttgaggtgtcagatagggatgctgtttggagcctttggcaggccctcataggtgaa
tcacagcagaggcctctaggattttggagcaaggccctgtcatcttctgcagataactac
tctcctcttgagagacagctcttggcctattactgggctttggtggaaactgaacgtttg
actatgggtcatcaagtcaccatgcgacctgaactgcccatcatgaactgggtgctttct
gacccatctagccataaagccgccacccctgtcattgctcaatgggcccatgaacaaagt
ggccgtggtggcagagatggaggttatgcatgggctcagcaacatggacttccacttgtc
aaggctagagccactactgagtgcccaatttgccagcagcagagaccaacactgagccct
cgatatggcaccattccttggagtgatcagctagctacctggtggcaggttgattatatt
ggacctcttccatcatggaaatggcagaagtttgtcctcactggaatagatgcctactcc
agatatgggtttgcctatgctgcccacaatgcttctgccaagactaccatccgtggactc
atggaatgctttgtccactgtcatggtattccacacagcattgcctctgaccaaggcact
cacttcacagctaaagaagtgcagcagtgggctcgtgcttatggaattcactggtcttac
catgttccccatcatcctgaagcagctggattgttagaacagtag

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_5|257_aa
MKISSIYVARAESDMEEKEHKIHFLIKMFLSQVYVSSRRAVTQSAPEQGSFHPHHLSHHH
CHHRHHHHLRHHAHPHHLHHQEAGLHANPVTPCLCMCPLFSCQWEGRLEVVVPHLRQIHR
VDILQGAEIVFLATDMHLPAPADWIIMHSCLGHHFLLVLRKQERHEGHPQFFATMMLIGT
PTQADCFTYRLELNRNHRRLKWEATPRSVLECVDSVITDGDCLVLNTSLAQLFSDNGSLA
IGIAITATEVLPSEAEM

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_5|774_bp
atgaagatctcatccatctacgtagcaagagctgaatctgatatggaggagaaggagcat
aagatacattttctaattaagatgttcctatcccaggtgtatgtgtccagtcggcgcgcc
gtcactcagagcgctccagagcaaggcagcttccaccctcaccatctctcccaccaccac
tgccaccaccgccaccaccaccacctccgccaccacgcccacccccaccaccttcaccac
caggaggcggggctgcacgccaacccggtgacgccctgcctgtgcatgtgtcccttgttc
tcctgccagtgggaaggccgcctggaggtggtggtgccccacctgcggcagatccatagg
gttgacatcctccagggagccgagatcgtcttcctggccacggacatgcacctccccgcg
ccggctgattggatcatcatgcactcctgccttggccaccactttctgttggtgctgagg
aaacaggagaggcatgaagggcacccccagttctttgccaccatgatgctgattgggacc
cccacccaggccgactgcttcacctatcgcctggagctcaacagaaaccatcggcgcctc
aagtgggaggccacgccccggtctgttcttgagtgcgtggactcggtgattacggacggg
gactgcctcgtcctcaacacctcgctggcacagctcttctctgacaacggcagccttgcc
attgggattgccatcaccgcgacagaggtcctcccctcagaagctgaaatgtga

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_6|409_aa
MAPIDIGDYESGEGGRKTMVEKVSIACYAHYLDDRIIHIPSLSDTRHQPPEDAQSHLDYP
KEIRDEWPSPIRHSLGRSIMASQLNGWMKSCSAPVPGQPIQCDSSEYDDHGEKQPTRELL
TNDVEKLEENTQMPPLEQDNSEVSYITSQGPQGDCSPPARSGSMWTQSLLSLAFDPDTWL
VGIIPLSFQKPTSHPDASFTRFFSQQCLKKKMLEGHKGKRLPETKVDSVGERHQTINPAF
PASWGNNTRSLTAPNHLESESEPRQTRRVPDTVPAPETRVCKGLHTFAGGSLPPPRKDLN
LSPVKMYCFRHPARKSLTLEEARHHAIRTLLQLCKRPCEGQPRSSVNASINSASTRQPSL
AYRSFYLQRKRMKAEECGSKEGARDYERVLKKFHPKERVANRIPSRRQP

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_6|1230_bp
atggcaccaatagacattggggactatgagagtggggagggtggaaggaagacaatggtt
gaaaaagtatctattgcgtgctatgctcactacctggatgacaggattattcatatacca
agccttagtgacacgagacaccagcctcctgaggatgctcagtcccacctggactaccca
aaggagatcagagacgagtggcccagtcctatccgtcattcactgggacgctccatcatg
gctagtcagctgaatggatggatgaagtcctgttcagcaccagtgcctggacagccaatc
cagtgtgacagctcagagtatgatgaccatggggagaaacagcccacgagggagctattg
acaaatgatgtggagaaattggaggaaaatacccagatgcctcctctggagcaggacaac
tctgaggtatcctacatcacctcccagggtccccagggagactgcagcccacctgcccgc
agtgggtcaatgtggacacagtccctcctttctctggcttttgacccggatacatggctt
gtaggcatcatcccgctttccttccagaagcccacctctcaccctgatgcctccttcact
cggttcttctcacagcagtgtttgaaaaagaaaatgttggaagggcataaggggaagcgt
ttaccagaaaccaaggttgacagcgtcggggaaagacatcagaccatcaatccagctttt
cctgccagctggggaaacaacactcggtcactaacagcacccaatcacctagagagcgag
agtgagccgaggcaaacacgccgggttccagacaccgtcccagcccccgagacccgggtt
tgcaaagggctgcacacgttcgccggagggtcgctgccgcctccgagaaaggacttgaac
ctgagcccggtgaagatgtattgtttccgtcatcctgctagaaaatcactcactctggag
gaagccagacatcatgctataaggacccttttgcagctgtgtaagaggccatgtgaaggg
cagccgaggtcttctgtcaatgccagcatcaactcagcatcaactcgccagccatctctt
gcctacagatctttctacctgcaaaggaagaggatgaaggcagaagaatgcggcagcaag
gagggagcgagagattatgagagggtgctaaagaaatttcatccaaaggagagagtggcc
aacaggatcccctccagaaggcagccctga

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_7|262_aa
MAGWEGGGLDSGPASQADAAQSADILSCARINRRKMSGQNKGGAGAHSPPTQFEVTLNLI
THLGIVHQKQGSPENLTSIFQEGLELLGKHQSEPSIEIHLNRPLQFDLQYITFSGSLTPS
FRFYNTFYQSLVVSAPCHLILSIGLINDLNCDSGLLIKSAKHWGFFASSNAKEIKCFAER
RFEIFGKAQCSKGSPYSQKGFTSFDPTFAFQQLSFSPGKLVQSQTLLQCVTGGGEALAAS
EYFGTHSIQALRSPRTFSMNVG

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_7|789_bp
atggcgggctgggaaggagggggcctggattcagggccagcttcacaggcagatgctgct
cagagcgcggacattctatcctgtgcccgcatcaacaggagaaagatgtcagggcaaaac
aagggaggcgctggggcacacagtcctcccactcagtttgaagtgacattgaatctgatc
actcacctaggaattgttcaccagaaacaaggatctcctgaaaacctcaccagtatcttc
caggaaggacttgagttattgggtaagcaccaatctgaaccatccatagaaatacacctc
aatcggcctcttcagtttgacctgcagtacatcaccttctctggtagtctgacacccagt
ttccgcttctataacacattttatcagtctttggtggtcagtgctccttgccacttgatc
ttgtccattggccttataaatgatctcaactgtgactctgggctactgattaagtctgct
aaacattggggattttttgcctctagcaatgctaaagaaatcaagtgttttgctgaaagg
cgatttgaaatatttggtaaagcccaatgtagcaagggcagcccttattctcagaaggga
ttcacctcttttgatccgacatttgcatttcaacagctgagcttttcccctgggaagctc
gtccagtctcagacccttcttcagtgtgtgactggaggaggggaggctctggctgcttct
gagtactttgggacacactctattcaagctttgagaagccccagaaccttctcgatgaat
gtaggttag

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_8|109_aa
MPIVKQAKIYHNKLKVEGNCEYLTGWLQKFEKRYSIKFLRTHGAKASTDHKAAEKLIDKA
AKVIADENLTPEQLSNADEISLFGHYSPQKTLTTADETVPIGIQMPRTE

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_8|330_bp
atgccgatcgtgaaacaagcaaagatctatcacaataaactaaaggttgaagggaactgt
gagtatttaacaggctggttgcagaaatttgagaaaagatacagcattaagtttttaagg
actcatggtgctaaagcatctactgatcacaaagcagcggagaaactcattgacaaggct
gccaaggtcattgctgatgaaaacttgacgccagaacaactctccaatgctgatgaaata
tcactgtttgggcattacagcccccaaaagacactgactacagctgatgagacagtccct
ataggaattcagatgccaaggacagaataa

>gi568815585r:45683386_45951629|GENSCAN_predicted_peptide_9|88_aa
MVPRGALALLPPSAEWRLWQLPFPSLAAELKVLCSSSDWWSLITWPQLQREAGKMPISFA
VGASVTFSTCLVSMCEDEQCSVESRCTG

>gi568815585r:45683386_45951629|GENSCAN_predicted_CDS_9|267_bp
atggtcccacgaggagccctggcactgctgcctccctcagcagaatggagactgtggcag
ctgccttttccttctctggctgctgaattgaaagtcctttgtagcagctctgattggtgg
agcctgatcacatggccccagctgcagagggaggctgggaagatgccaatttcctttgct
gttggagcatctgtgacattttcgacgtgtttagtttcaatgtgtgaggatgagcaatgc
agcgtggagagccggtgcactgggtga