GENSCAN 1.0	Date run:  6-Nov-116	Time: 14:37:14

Sequence gi568815585f:38249999_38460775 : 210777 bp : 35.60% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9388   9390    3  0  0  113   81     0 0.592   1.85
 1.02 Intr +  15391  15830  440  0  2   31   17   403 0.025  18.89
 1.03 Intr +  16383  16712  330  0  0  -22   86   233 0.013   5.92
 1.04 Term +  23786  24284  499  2  1   26   48   195 0.469   2.31
 1.05 PlyA +  24316  24321    6                               1.05

 2.00 Prom +  24915  24954   40                              -6.35
 2.01 Init +  25670  25802  133  1  1   78   81    46 0.020   3.25
 2.02 Term +  39618  41152 1535  1  2   39   37   568 0.001  36.43
 2.03 PlyA +  41326  41331    6                               1.05

 3.00 Prom +  53040  53079   40                              -3.25
 3.01 Init +  55990  56058   69  0  0   72   35    96 0.573   3.80
 3.02 Intr +  99787  99923  137  0  2  -11  103   111 0.849   1.15
 3.03 Intr + 100001 100057   57  2  0  153   65    88 0.896  10.08
 3.04 Intr + 104241 104298   58  0  1   65  100    62 0.176   3.07
 3.05 Intr + 108095 108134   40  1  1   65   95    30 0.052  -1.72
 3.06 Term + 141505 141695  191  2  2  107   38   130 0.055   6.53
 3.07 PlyA + 143741 143746    6                               1.05

 4.05 PlyA - 143799 143794    6                               1.05
 4.04 Term - 154162 153991  172  0  1   31   49   201 0.054   6.82
 4.03 Intr - 177063 176942  122  0  2   76  103    92 0.206   7.87
 4.02 Intr - 182483 182368  116  0  2   73   91   -18 0.120  -3.75
 4.01 Intr - 185651 185476  176  1  2   75  100   168 0.652  15.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  15391  15834  444  0  0   31   41   378 0.961  21.65
S.002 Sngl -  38940  38524  417  0  0   59   46   278 0.849  16.75
S.003 Init - 160261 160139  123  1  0   84  111    70 0.875   9.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:38249999_38460775|GENSCAN_predicted_peptide_1|423_aa
MESSSWQQVGALLGGSFQRKEQAAVFAVVQPPLVRSRRTRCGVDPYQTAADLQTRVLTEE
KQTESNNKNNTNKKDSTKSPFKGHQPQRSKEDKSMKMEKNQHKSAENPKNQNASSAPNDH
NTSPARAQNGAEAELDEVIEVGFRGWAWQADKIREKRMKRNEQNLRELWDYVKRLNLKMI
EVPERNGENGTKVENTLQDIIQENFPNLARQANIQIQNIQRTAIRYSMKSSTRRHIIMRF
FKVEMKQKMLTAAREKARVNDKNHMIISIDAEKAFNKIQHPFMLKTLNKLTTDGAYLKII
RALYDKPIANIILNGQKLEAFPLKTGIRQGCPLSQLLFNIILEVLARAIRQEKEIKGIQR
GRQKVKLSLFADDVIVYLENSIVSAPKLLKLISNFSKVSGYKINVQNSEAFLYIKNRQAE
RQS

>gi568815585f:38249999_38460775|GENSCAN_predicted_CDS_1|1272_bp
atggagagctccagctggcagcaggttggtgcccttctgggaggaagcttccagaggaag
gagcaggcagcagtctttgctgttgtgcagcccccactggtgagatccaggcgaacaagg
tgtggagtagacccctaccaaactgcagcagacctgcagacaagggtactgacagaagaa
aaacaaacagaaagcaacaacaaaaacaacaccaacaaaaaagactccacaaaatcccca
ttcaaaggtcatcagcctcaaagatcaaaggaagataaatccatgaagatggagaaaaac
caacacaaaagtgctgaaaatcccaaaaaccagaatgcctcttctgctccaaatgatcat
aacacttctccagcaagggcacagaatggggctgaagctgagttggatgaagtgatagaa
gtaggcttcagaggctgggcatggcaggcagacaagattagagaaaaaagaatgaaaagg
aatgaacaaaacctccgagaactatgggactatgtaaagaggctgaacctcaaaatgatt
gaagtacctgaaagaaatggggagaatggaaccaaggtggaaaacactcttcaggatatc
atccaggaaaacttccctaacctagcaagacaggccaatattcaaattcagaatatccag
agaactgcaataagatattccatgaaaagttctacccgaagacacataatcatgaggttc
ttcaaggttgaaatgaagcaaaaaatgttaacggcagccagagagaaggcaagagttaat
gacaaaaaccacatgattatctcaattgatgcagaaaaggccttcaacaaaattcaacat
cctttcatgctaaaaactctcaataaactaactactgatggagcatatctcaaaataata
agagctctttatgacaaacccatagccaatatcatattgaatggacaaaagctggaagca
ttccctttgaaaactggcataagacaaggatgccctctctcacaactcctattcaacata
atattggaagttctggccagggcaattaggcaagagaaagaaataaagggtattcaaaga
ggaagacagaaagtcaaattgtctctgtttgcagatgatgtgattgtatatttagaaaac
tccatcgtctcagcccccaaactccttaagctgataagcaacttcagcaaagtctcagga
tacaaaatcaatgtgcaaaactcagaagcattcctgtacatcaaaaatagacaagcagag
agacaatcatga

>gi568815585f:38249999_38460775|GENSCAN_predicted_peptide_2|555_aa
MEYHIAIKKNEIMSLAGTWVKLETVILSKLTQEQKTKHHMFSLKAPPHTYSKIDHILGSK
ALLSKCKRTEIITNCLSDHSAIKLELRIKKLTQNHSTTWKLNNLLLNDYWVHNEMKAEIK
MFFETNENKDTTYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDNLTSQLKELEKQEQTH
SKASRRQEITKITAELKEIETKKNPSKINESRSWFFERVNKIGRPLGRLIKKKREKNQID
TIKNDKGDITTDPTEIQTTIREYYKHLYANKLEYLEEMDKFVDTHTLPRLNQEEVESLNR
PIAGSEIVAIINRLPTKKSPGPDGITAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE
ASIILIPKPGRDTTKKENFRPISLMNIDAKILSKILANRIQQHIKKLIHHDRVGFIPGMQ
GWFNIRKSINVIQHINRTNGKNHMIISIDEEKAFDKIQQPFMLKTVNKLGIDGTYFKIIR
AIYDNPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARTIRQEKEIKGIQLG
KEEVKLSLFVGDMII

>gi568815585f:38249999_38460775|GENSCAN_predicted_CDS_2|1668_bp
atggaataccatatagccataaaaaagaatgagatcatgtcccttgcagggacatgggtg
aagctggaaaccgtcattctcagcaaactaacacaggaacagaaaaccaaacaccacatg
ttctcacttaaagcaccaccccacacctattccaaaattgaccacatacttggaagtaaa
gctctcctcagcaaatgtaaaagaacagaaattataacaaactgtctctcagaccacagt
gcaatcaaactagaactcaggattaagaaactcactcaaaaccactcaactacatggaaa
ctgaacaacctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaag
atgttctttgaaaccaacgagaacaaagacacaacataccagaatctctgggacacattc
aaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaaga
tccaaaattgacaacctaacatcacaattaaaagaactagaaaagcaagagcaaacacat
tcaaaagctagcagaaggcaagaaataactaaaattacagcagaactgaaggaaatagag
acaaaaaaaaacccttcaaaaattaatgaatccaggagctggttttttgaaagggtcaac
aaaattggtagaccactaggaagactaataaagaaaaaaagagagaagaatcaaatagac
acaataaaaaatgataaaggggatatcaccactgatcccacagaaatacaaactaccatc
agagaatactacaaacacctctatgcaaataaactagaatatctagaagaaatggataaa
ttcgttgacacacacactctcccaagactaaaccaggaagaagttgaatctctgaataga
ccaatagcaggatctgaaattgtggcaataatcaatcgcttaccaaccaaaaagagtcca
ggaccagatggaatcacagccgaattctaccagaggtacaaggaggaactggtaccattc
cttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttatgag
gccagcatcatcctgataccaaagccgggcagagacacaaccaaaaaagagaattttaga
ccaatatccttgatgaacattgatgcaaaaatcctcagtaaaatactggcaaaccgaatc
cagcagcacatcaaaaagcttatccaccatgatcgagtgggcttcatccctgggatgcaa
ggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacagaaccaatggc
aaaaaccacatgattatctcaatagatgaagaaaaggcctttgacaaaattcaacaaccc
ttcatgctaaaaactgtcaataaattaggtattgatgggacgtatttcaaaataataaga
gctatctatgacaaccccacagccaatatcatactgaatgggcaaaaactggaagcattc
cctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacatagtg
ttggaagttctggccaggacaattaggcaggagaaggaaataaagggtattcaattagga
aaagaggaagtcaaattgtccctgtttgtaggcgacatgattatatag

>gi568815585f:38249999_38460775|GENSCAN_predicted_peptide_3|183_aa
MVEGEGEAGLSHGSSSSMRESREQQLRRSPDCRGRRGREWSGAVPSTLEEVVLPPRSCRV
FWIHSGTTMSKVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITN
GMGLTVSQTAVTVIALLGLAQKGYQALAGARVCLQRVLLCYLSSGLPAMNTSTCSGGGGS
RVK

>gi568815585f:38249999_38460775|GENSCAN_predicted_CDS_3|552_bp
atggtggaaggtgaaggagaagcaggtctttcacatggcagcagcagcagcatgagagag
agcagggagcaacaacttcggaggtccccagattgcagagggagacgtggacgtgagtgg
agcggggcggtccccagcacactagaggaagtcgtgctacccccgcggagttgtcgtgtg
ttctggattcattccggcaccaccatgtcgaaggtttcctttaagatcacgctgacgtcg
gacccacggctgccgtacaaagtactcagtgttcctgaaagtacacctttcacagcagtc
ttaaagtttgcagcagaagaatttaaagttcctgctgcaacaagtgcaattattaccaat
gggatggggcttactgtgagccagactgcagtgactgttatcgctcttctgggtctagcc
cagaagggctaccaggctctggctggtgctagagtatgtctgcaaagagtcctgttatgc
tatttgtcttcaggtcttccagcgatgaatactagcacctgctctggtggaggtggcagc
agagtgaagtag

>gi568815585f:38249999_38460775|GENSCAN_predicted_peptide_4|195_aa
XIFVAQEVESGSKKAKQNMSQGVNSFLGGMSLNELVMRRGAFLMKGERETIESDGLIMQG
NAWFVQRQKKRRNEIKTFNRSRKRIELKTYVSRGDTSQMVSEVESKIELPASPRSTEGPS
TGPAGPWCPLFSHSNCRSCDGFCSGAAIGVSSSLSNYTFSNFSSSSNSNSSSSNSSRWLL
LSIRTSSSSTERVGS

>gi568815585f:38249999_38460775|GENSCAN_predicted_CDS_4|588_bp
nntatcttcgtggcccaagaagtagagagcggtagtaagaaggcaaaacagaacatgtca
caaggggtcaatagctttcttgggggaatgagtctaaatgaactagtcatgagaagagga
gctttcctaatgaaaggagaaagagaaaccatagagagtgatggcttaataatgcaaggc
aatgcctggtttgttcaaaggcagaaaaagagaagaaatgaaataaaaacatttaataga
agcagaaaaagaattgagttgaaaacatatgtaagcaggggagatacttctcagatggtg
tcagaggtggaatccaaaatagagcttccagcaagccccaggagcactgagggaccaagc
acgggacctgctgggccctggtgtccactgttctctcacagcaactgcaggtcgtgtgat
ggcttctgctcaggtgcagcaattggtgtctccagtagcctcagcaattacactttcagt
aacttcagcagcagcagcaatagcaatagcagcagcagcaacagcagccgatggctcctg
ctgagcatcagaacctccagcagctcaacagagcgtgtgggctcctga