GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:26:49

Sequence gi568815585f:20861349_21062195 : 200847 bp : 44.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   1510   1369  142  2  1   92  108   151 0.380  16.91
 1.01 Init -  10972  10942   31  1  1   33  113     7 0.162  -2.40
 1.00 Prom -  28556  28517   40                              -3.96

 2.00 Prom +  34672  34711   40                              -3.76
 2.01 Init +  41413  41556  144  0  0   88    6   225 0.494  12.42
 2.02 Term +  49811  49858   48  1  0   32   55    88 0.223  -2.80
 2.03 PlyA +  50001  50006    6                               1.05

 3.03 PlyA -  50108  50103    6                               1.05
 3.02 Term -  60445  60329  117  1  0   44   52   144 0.450   4.94
 3.01 Init -  60986  60903   84  2  0   81   71    44 0.729   2.82
 3.00 Prom -  61367  61328   40                              -4.26

 4.00 Prom +  63467  63506   40                              -2.26
 4.01 Init +  84006  84063   58  2  1   75   86    66 0.624   6.57
 4.02 Term +  84930  85087  158  1  2   29   47   107 0.365  -1.20
 4.03 PlyA +  86511  86516    6                               1.05

 5.03 PlyA -  86596  86591    6                               1.05
 5.02 Term -  87559  87282  278  2  2   -6   48   264 0.759   8.62
 5.01 Init -  88116  87957  160  0  1   43   49   165 0.866   8.09
 5.00 Prom -  90277  90238   40                              -5.06

 6.00 Prom +  90307  90346   40                              -5.76
 6.01 Init +  99964 100381  418  0  1   60 -115   429 0.968  16.40
 6.02 Term + 100414 100850  437  2  2   92   43   368 0.984  28.15
 6.03 PlyA + 100900 100905    6                               1.05

 7.03 PlyA - 101968 101963    6                               1.05
 7.02 Term - 103514 103405  110  0  2   68   43    90 0.831   1.17
 7.01 Init - 106252 106177   76  1  1   93   86    27 0.475   2.33
 7.00 Prom - 110307 110268   40                              -3.66

 8.09 PlyA - 111417 111412    6                               1.05
 8.08 Term - 114016 113522  495  1  0  112   37   686 0.998  60.47
 8.07 Intr - 118449 118343  107  1  2   53   90    56 0.970   2.23
 8.06 Intr - 120300 120118  183  1  0    0   83   119 0.022   2.36
 8.05 Intr - 122458 121876  583  1  1  115   67   817 0.028  74.55
 8.04 Intr - 127956 126533 1424  1  2  126   25  1972 0.974 183.89
 8.03 Intr - 130056 129924  133  0  1  104   99   236 0.890  26.52
 8.02 Intr - 137733 137311  423  0  0   37   29   198 0.117   2.86
 8.01 Init - 157265 157143  123  2  0   52   43   149 0.358   6.99
 8.00 Prom - 167066 167027   40                              -2.46

 9.03 PlyA - 167107 167102    6                               1.05
 9.02 Term - 171561 171415  147  0  0   80   38   103 0.830   2.40
 9.01 Init - 184678 184337  342  1  0   68   94   320 0.949  27.84
 9.00 Prom - 189865 189826   40                              -6.16

10.00 Prom + 192383 192422   40                              -3.26
10.01 Init + 199471 199904  434  0  2   87   48   247 0.747  14.29
10.02 Term + 200004 200244  241  0  1   87   46   151 0.493   6.30
10.03 PlyA + 200551 200556    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 120277 120118  160  1  1   95   83   101 0.941  10.29
S.002 Term - 122458 121865  594  1  0  115   45   825 0.969  75.43


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_1|58_aa
MLVVLGQLGKETSKVDYVLFQAATAIMEAVVREWILLEKGSIESLRTFLLTYVLQRPN

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_1|174_bp
atgttagttgtgcttggacaactggggaaagaaactagtaaagtggactatgtcctcttt
caagctgccacagccataatggaagcagttgtccgagagtggattctcttggaaaaaggt
agcatcgagtctctgcgaacattccttttaacctatgtcttacaaaggcccaan

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_2|63_aa
MRCILGAGAAAGQSPPRPRSLTRSQGRRSRCRHRRRGLGGSGRAAGFRDVGRLSDCAYRQ
KVC

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_2|192_bp
atgcgctgcattctgggagcgggcgccgcggccggccaatcgccgccgcgaccccggagc
ctcacgcgctcccagggccgtcgcagccgctgtcgacaccggcgtcgcggcctcggcggg
tctggccgggctgccgggttccgggatgtgggcagactcagcgactgtgcctaccgccag
aaggtttgctga

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_3|66_aa
MVEHSGISRLNRTLQLKIKHHLHLLNSQPLDFGFSQQPEDVLGFDVFDAVWKALAGLTEM
ELPGQA

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_3|201_bp
atggtggagcactcaggcatttctaggctcaacagaaccctgcagctgaagattaaacac
cacctgcatctactcaactcacagccattggactttggtttttctcaacagccagaggat
gtgctgggctttgatgtcttcgatgctgtttggaaagccttagcaggcctgactgagatg
gagctgccaggccaggcgtga

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_4|71_aa
MSTFFTGIPNTQYSVWHTAAPEGPGRSRGRQDGRNPPQLAVNRKGDTERGSWHPSSPHRS
LLVTATRDRAM

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_4|216_bp
atgtccaccttcttcacgggtatccccaatacacagtacagtgtctggcacacagcagct
cctgaagggcctggccgttcacggggcaggcaggacgggcgaaatcccccgcagttagcg
gtcaacagaaagggcgacacggaacggggttcctggcacccgagctcgccgcaccgaagt
ctcctggtaacagcgacacgggaccgggctatgtga

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_5|145_aa
MRDPNTKHARGFGFVIYATVEEVDAATNARPHKVDGRVVEPKRAVSREDSQRPEIIGYLE
QYGKMEVIEITTDRGSGKKRGFAFITFDDYDSVDKIVIQKYHNVNVHNCEVRKPCQSKRW
RVLHPAKKVEVVLETLVVIMVVSWE

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_5|438_bp
atgagagatccaaacaccaagcacgccaggggctttgggtttgtcatctatgccactgtg
gaggaggtggacgcagccacgaatgcaaggccacacaaggtggatggaagagttgtggaa
ccaaagagagctgtctcaagagaagattctcaaagaccagagattattggttatttggaa
cagtatgggaaaatggaagtgatcgaaatcacgactgaccgaggcagtggcaagaaaagg
ggctttgcttttataacctttgatgactatgactccgtggataagattgtcattcagaaa
taccataacgtgaatgtccacaactgtgaagttaggaagccttgtcaaagcaaaagatgg
cgagtgcttcatccagccaaaaaggtcgaagtggttctggaaactttggtggtgatcatg
gtggtgtcatgggaatga

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_6|284_aa
MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKKTWEKLLL
AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
LLVVTDPRADPPASHGGVLYSPLRYVDIAIPCNNKGARSVGLMWWMLAREVLRMRGTISR
EHPWEVMTDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSEG
VQVPSVPIQQFPTEDWSAQPATEDWSAAPTVQATEWVGATTDWS

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_6|855_bp
atgtccggagcccttgatgtcctgcaaatgaaggaggaggatgtccttaagttccttgca
gcaggaacccacttaggtggcaccaatcttgacttccagatggaacagtacatctataaa
aggaaaagtgatggcatctatatcataaatctgaagaagacctgggagaagcttctgctg
gcagctcgtgctattgttgccattgaaaaccctgctgatgtcagtgttatatcctccagg
aatactggccagagggctgtgctgaagtttgctgcggccactggagccactccaattgct
ggccgcttcactcctggaaccttcactaaccagatccaggcagccttccgggagccacgg
cttcttgtggttactgaccccagggctgacccaccagcctctcacggaggcgtcttatat
tctcctctgcgctatgtggacattgccatcccatgcaacaacaagggagctcgctcagtg
ggtttgatgtggtggatgctggctcgggaagttctgcgcatgcgtggcaccatttctcgt
gaacacccatgggaggtcatgactgatctctacttctacagagatcctgaagagattgaa
aaagaagagcaggctgctgctgaaaaggcggtgaccaaggaggaatttcagggtgaatgg
actgctccagctcctgagttcactgctactcagcctgaggttgcagactggtctgaaggt
gtgcaggtgccctctgtgcctattcagcagttccctactgaagactggagcgctcagcct
gccacggaagactggtctgcagctcccactgttcaggccactgaatgggtaggagcaacc
actgactggtcttaa

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_7|61_aa
MREWCRVQGPVCLVLVAILGNHLSKVLEVEKSKIKVPASCEGFVAASSHGGRQKGKGAKG
D

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_7|186_bp
atgcgggaatggtgcagggtgcagggtcctgtgtgtcttgttctggtggctatcttgggt
aatcacctgtccaaagttctggaggttgagaagtccaagatcaaggtgccagcatcttgt
gagggctttgttgctgcatcctcccatggtggaaggcagaagggcaaaggggccaaagga
gactga

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_8|1156_aa
MSLSGTWVKDIREATTVFLDLLRKQGVVCQGGPACPFIKGQVTGAPASRGQGCGPGRQNP
RPACTRSRGSLSCVDKVVEKVTRALAPCAQGHRDSYPAWTTSPGPPPRVHKVVDNVAGPP
PGVHNVAAAPAPCGQGHGALPHQPKVVGPRPASPRIDKALGPHLPKIAGSAALRGGARNG
GAEMAGRALKQTGSRSIEAALEYISKMGYLDPRNEQIVRVIKQTSPGKGLMPTPVTRRPS
FEGTGDSFASYHQLSGTPYEGPSFGADGPTALEEMPRPYVDYLFPGVGPHGPGHQHQHPP
KGYGASVEAAGAHFPLQGAHYGRPHLLVPGEPLGYGVQRSPSFQSKTPPETGGYASLPTK
GQGGPPGAGLAFPPPAAGLYVPHPHHKQAGPAAHQLHVLGSRSQVFASDSPPQSLLTPSR
NSLNVDLYELGSTSVQQWPAATLARRDSLQKPGLEAPPRAHVAFRPDCPVPSRTNSFNSH
QPRPGPPGKAEPSLPAPNTVTAVTAAHILHPVKSVRVLRPEPQTAVGPSHPAWVPAPAPA
PAPAPAPAAEGLDAKEEHALALGGAGAFPLDVEYGGPDRRCPPPPYPKHLLLRSKSEQYD
LDSLCAGMEQSLRAGPNEPEGGDKSRKSAKGDKGGKDKKQIQTSPVPVRKNSRDEEKRES
RIKSYSPYAFKFFMEQHVENVIKTYQQKVNRRLQLEQEMAKAGLCEAEQEQMRKILYQKE
SNYNRLKRAKMDKSMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAH
VKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDMMSLLIRMEVFPEHLARFYI
AELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHVR
QDSMEPSDLWDDVSNCRCGDRLKTLEQRARKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ
LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPAQVKLSPEARDLITKLC
CSADHRLGRNGADDLKAHPFFSAIDFSSDIRKQPAPYVPTISHPMDTSNFDPVDEESPWN
DASEGSTKAWDTLTSPNNKHPEHAFYEFTFRRFFDDNGYPFRCPKPSGAEASQAESSDLE
SSDLVDQTEGCQPVYV

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_8|3471_bp
atgtcactctcaggcacctgggtgaaggacatcagggaagcgaccacagtcttcctggac
ctgctgcgcaagcagggtgtggtctgccagggtggtcctgcttgtcctttcatcaaaggc
caggtcaccggggcccctgcctcgcgtggacaaggttgtggaccaggtcgccagaacccc
cgccctgcgtgcacaaggtcgcggggatccctgtcctgcgtggacaaggtcgtggaaaag
gtcaccagggcccttgcgccgtgtgcgcaaggtcaccgggactcctaccctgcgtggaca
acgtcgccagggcccccgccccgcgtgcacaaggtcgtggacaatgtcgcagggccccca
cccggcgtgcacaatgtcgctgcggcccccgccccgtgtggacaaggtcacggggctctg
ccccaccagcccaaggttgtcgggccccgccccgcctcgccccgcattgacaaggccttg
gggccccacctgcccaagatcgccgggagcgccgcgctcaggggaggggcacgcaatggt
ggggcggagatggctggccgagctctcaagcagactggcagcaggagcatcgaggccgcc
ctggagtacatcagcaagatgggctacctggacccgaggaatgagcagattgtgcgggtc
attaagcagacctccccaggaaaggggctcatgccaaccccagtgacgcggaggcccagc
ttcgaaggaaccggcgattcgtttgcgtcctaccaccagctgagcggtaccccctacgag
ggcccaagcttcggcgctgacggccccacggcgctggaggagatgccgcggccgtacgtg
gactaccttttccccggagtcggcccccacgggcccggccaccagcaccagcacccaccc
aagggctacggtgccagcgtagaggcagcaggggcacacttcccgctgcagggcgcgcac
tacgggcggccgcacctgctggtgcctggggaacccctgggctacggagtgcagcgcagc
ccctccttccagagcaagacgccgccggagaccgggggttacgccagcctgcccacgaag
ggccagggaggaccgccaggcgccggcctcgctttcccaccccctgccgccgggctctac
gtgccgcacccacaccacaagcaggccggtcccgcggcccaccagctgcatgtgctgggc
tcccgcagccaggtgttcgccagcgacagccccccgcagagcctgctcactccctcgcgg
aacagcctcaacgtggacctgtatgaattgggcagcacctccgtccagcagtggccggct
gccaccctggcccgccgggactccctgcagaagccgggcctggaggcgccgccgcgcgcg
cacgtggccttccggcctgactgcccagtgcccagcaggaccaactccttcaacagccac
cagccgcggcccggtccgcctggcaaggccgagccctccctgcccgcccccaacaccgtg
acggctgtcacggccgcgcacatcttgcacccggtgaagagcgtgcgtgtgctgaggccg
gagccgcagacggctgtggggccctcgcaccccgcctgggtgcccgcgcctgccccggcc
cccgcccccgcccccgccccggctgcggagggcttggacgccaaggaggagcatgccctg
gcgctgggcggcgcaggcgccttcccgctggacgtggagtacggaggcccagaccggagg
tgcccgcctccgccctacccgaagcacctgctgctgcgcagcaagtcggagcagtacgac
ctggacagcctgtgcgcaggcatggagcagagcctccgtgcgggccccaacgagcccgag
ggcggcgacaagagccgcaaaagcgccaagggggacaaaggcggaaaggataaaaagcag
attcagacctctcccgttcccgtccgcaaaaacagcagagacgaagagaagagagagtca
cgcatcaagagctactcgccatacgcctttaagttcttcatggagcagcacgtggagaat
gtcatcaaaacctaccagcagaaggttaaccggaggctgcagctggagcaagaaatggcc
aaagctggactctgtgaagctgagcaggagcagatgcggaagatcctctaccagaaagag
tctaattacaacaggttaaagagggccaagatggacaagtctatgtttgtcaagatcaaa
accctggggatcggtgcctttggagaagtgtgccttgcttgtaaggtggacactcacgcc
ctgtacgccatgaagaccctaaggaaaaaggatgtcctgaaccggaatcaggtggcccac
gtcaaggccgagagggacatcctggccgaggcagacaatgagtgggtggtcaaactctac
tactccttccaagacaaagacagcctgtactttgtgatggactacatccctggtggggac
atgatgagcctgctgatccggatggaggtcttccctgagcacctggcccggttctacatc
gcagagctgactttggccattgagagtgtccacaagatgggcttcatccaccgagacatc
aagcctgataacattttgatagatctggatggtcacattaaactcacagatttcggcctc
tgcactgggttcaggtggactcacaattccaaatattaccagaaagggagccatgtcaga
caggacagcatggagcccagcgacctctgggatgatgtgtctaactgtcggtgtggggac
aggctgaagaccctagagcagagggcgcggaagcagcaccagaggtgcctggcacattca
ctggtggggactccaaactacatcgcacccgaggtgctcctccgcaaagggtacactcaa
ctctgtgactggtggagtgttggagtgattctcttcgagatgctggtggggcagccgccc
tttttggcacctactcccacagaaacccagctgaaggtgatcaactgggagaacacgctc
cacattccagcccaggtgaagctgagccctgaggccagggacctcatcaccaagctgtgc
tgctccgcagaccaccgcctggggcggaatggggccgatgacctgaaggcccaccccttc
ttcagcgccattgacttctccagtgacatccggaagcagccagccccctacgttcccacc
atcagccaccccatggacacctcgaatttcgaccccgtagatgaagaaagcccttggaac
gatgccagcgaaggtagcaccaaggcctgggacacactcacctcgcccaataacaagcat
cctgagcacgcattttacgaattcaccttccgaaggttctttgatgacaatggctacccc
tttcgatgcccaaagccttcaggagcagaagcttcacaggctgagagctcagatttagaa
agctctgatctggtggatcagactgaaggctgccagcctgtgtacgtgtag

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_9|162_aa
MRPKTFPATTYSGNSRQRLQEIREGLKQPSKSSVQGLPAGPNSDTSLDAKVLGSKDATRQ
QQQMRATPKFGPYQKALREIRYSLLPFANESGTSAAAEVNRQMLQELVNAGCDQAMRFSP
TLGSLMLSPPEVHSPASRGPPFESHFHDPSLWPSTAIHPSAR

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_9|489_bp
atgaggccaaagacttttcctgccacgacttattctggaaatagccggcagcgactgcaa
gagattcgtgaggggttaaaacagccatccaagtcttcggttcaggggctacccgcagga
ccaaacagtgacacttccctggatgccaaagtcctggggagcaaagatgccaccaggcag
cagcagcagatgagagccaccccaaagttcggaccttatcagaaagccttgagggaaatc
agatattccttgttgccttttgctaatgaatcgggcacctctgcagctgcagaagtgaac
cggcaaatgctgcaggaactggtgaacgcaggatgcgaccaggctatgaggttttctccc
acactgggttcgctcatgctgtcgccccctgaagtgcattccccagccagccgtggtcca
cccttcgagtcccacttccacgacccatccttgtggccttctacggccattcatcccagt
gcccgctaa

>gi568815585f:20861349_21062195|GENSCAN_predicted_peptide_10|224_aa
MAPDPWDRCAAGPGVPRLSGAPGRASSEKPIPRRQRKQRRARRYGLSGLGHRPRPAPPLP
RRDPGRPGRRTTKRRSPAAPARRRPPTSPAPLEPAPRAPYGLDYEPPGGGGSGRARTVGA
GRRAPSGQTSSAAPPGALPGASAPQGAVYTLGGVLAGGSRASRAGRPGTGGWSCCWPRRD
GGAPGGGGGVDGDCSIFPGRSRRGSKAQTQVGHSLHCWHSTGVT

>gi568815585f:20861349_21062195|GENSCAN_predicted_CDS_10|675_bp
atggccccggatccgtgggaccgctgcgccgccggaccgggggtcccgaggctgtcaggg
gcgcccggccgggcgtctagtgaaaagccgatcccccggagacagcggaagcagaggcgc
gcccggcgctacggcctttcgggtctaggacaccgcccccggcccgcgccgcccctgccc
cgccgggatcccggccgccccggtcgccgcacaacaaagcggcgcagccccgctgccccc
gcccgacgccggcctccaacttccccggctcctctggaaccggctccgcgggctccgtac
ggcctggactacgagccgccgggcgggggcggctccgggcgggcgcggaccgtgggggca
gggcgcagggctccgtccggacaaacttcctcggccgccccgccgggcgcccttcccgga
gcctcggcaccacagggcgcggtctacaccctcgggggcgtcctggccggcggctcccgg
gcctctcgcgccgggagaccgggcactggtggctggagctgctgctggccccgcagggac
gggggagccccgggcggcggcggtggcgtggacggcgactgctccatcttcccggggcgc
tcacgccgcggttccaaagcgcagacccaagtgggacattcgctacattgttggcattcc
acgggcgtcacgtga