GENSCAN 1.0	Date run:  7-Nov-116	Time: 23:39:52

Sequence gi568815584r:69785343_69986140 : 200798 bp : 44.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -    965    755  211  1  1  100  116   277 0.683  30.62
 1.01 Init -  11813  11458  356  2  2   74   96   517 0.991  47.71
 1.00 Prom -  14765  14726   40                              -5.06

 2.06 PlyA -  15300  15295    6                               1.05
 2.05 Term -  17901  17711  191  1  2   56   42   148 0.952   4.61
 2.04 Intr -  23573  23475   99  0  0   83   53    81 0.331   4.18
 2.03 Intr -  37656  37570   87  1  0   75   94    21 0.349   1.34
 2.02 Intr -  38572  38484   89  0  2   44  108    41 0.495   1.31
 2.01 Init -  39004  38766  239  1  2   81   36   199 0.712  11.49
 2.00 Prom -  43880  43841   40                              -5.76

 3.00 Prom +  45246  45285   40                              -4.56
 3.01 Init +  48880  48886    7  0  1   40   84     0 0.172  -4.25
 3.02 Intr +  57377  57523  147  0  0   43   58   213 0.559  14.01
 3.03 Intr +  60413  60558  146  0  2   89   45    41 0.090  -0.10
 3.04 Term +  74063  74272  210  1  0  108   42    67 0.013   1.39
 3.05 PlyA +  75618  75623    6                               1.05

 4.00 Prom +  86670  86709   40                              -4.76
 4.01 Init +  94337  94435   99  1  0  101  110   201 0.913  21.86
 4.02 Term +  96433  96549  117  0  0   63   53    31 0.531  -4.36
 4.03 PlyA +  97525  97530    6                               1.05

 5.02 PlyA -  97661  97656    6                               1.05
 5.01 Sngl - 100798  99998  801  1  0   94   36   910 0.992  82.24
 5.00 Prom - 113268 113229   40                              -1.76

 6.00 Prom + 128859 128898   40                              -4.56
 6.01 Init + 146668 146755   88  0  1   87   96    53 0.424   7.00
 6.02 Intr + 148727 148795   69  0  0  103   89    36 0.253   4.35
 6.03 Intr + 157603 157697   95  2  2   87   63    68 0.071   3.88
 6.04 Intr + 163636 163731   96  0  0   33   94    97 0.921   5.01
 6.05 Intr + 166796 166961  166  1  1   66  113   147 0.960  14.53
 6.06 Intr + 168078 168190  113  1  2   95   94   120 0.705  13.40
 6.07 Intr + 184523 184705  183  1  0   82   78    24 0.084   0.78
 6.08 Intr + 190373 190462   90  1  0   82   42    52 0.055   0.19
 6.09 Intr + 193060 193179  120  0  0   86   72    36 0.759   2.49
 6.10 Intr + 193816 194073  258  0  0   26  100   156 0.451   8.26
 6.11 Intr + 198135 198169   35  2  2   88   58    12 0.249  -4.78
 6.12 Term + 198522 199032  511  0  1   73   43   162 0.591   4.05
 6.13 PlyA + 200254 200259    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 158043 158126   84  2  0   87   92    64 0.806   7.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:69785343_69986140|GENSCAN_predicted_peptide_1|189_aa
MEAHNASAPFNFTLPPNFGKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKAHLWKPKG
LAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMKGDMNLSI
VMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIGIVLKSKR
PQYMRYVIK

>gi568815584r:69785343_69986140|GENSCAN_predicted_CDS_1|567_bp
atggaggcccacaacgcgtctgccccattcaacttcaccctgccacccaactttggcaag
cgccccacagacctggcactgagcgtcatcctggtgttcatgttgttcttcatcatgctc
tcgctgggctgcaccatggagttcagcaagatcaaggctcacttatggaagcctaaaggg
ctggccatcgccctggtggcacagtatggcatcatgcccctcacggcctttgtgctgggc
aaggtcttccggctgaagaacattgaggcactggccatcttggtctgtggctgctcacct
ggagggaacctgtccaatgtcttcagtctggccatgaagggggacatgaacctcagcatt
gtgatgaccacctgctccaccttctgtgcccttggcatgatgcctctcctcctgtacatc
tactccagggggatctatgatggggacctgaaggacaaggtgccctataaaggcatcgtg
atatcactggtcctggttctcattccttgcaccatagggatcgtcctcaaatccaaacgg
ccacaatacatgcgctatgtcatcaag

>gi568815584r:69785343_69986140|GENSCAN_predicted_peptide_2|234_aa
MPSGTIWILEARHSHSGVLLWPIYRVTRKAASFEREPEQDKALQQAQSAVQAALPLGLYD
PADPMVLEVSVADNDAGPHRHKVGRAQQHPIIQWKSYILDQAQTGPEGTKRAEICPHQVA
GLIDLDYQDEISLLIHNRAMQHQIQKFTNVLDGTERVQKYSLSDIAASAIGSHKMPCSFD
LSLVEQLLWGHQLPDKKSDYSEITMQMTYPQQPYEDPKQKPSAEPVISQNCERE

>gi568815584r:69785343_69986140|GENSCAN_predicted_CDS_2|705_bp
atgcctagtgggactatttggattttggaagcaagacattctcattcgggtgtgttactc
tggcccatttatcgagtgacccgaaaggctgccagttttgagcgagaaccagaacaggac
aaggcgctgcaacaggcccagtctgctgtgcaagctgctctgccacttgggctatatgac
ccagcagatccaatggtgcttgaggtgtcagtggcagataatgatgctggcccccataga
cataaagtgggtcgtgcacagcagcatcccatcatccaatggaagtcgtatatacttgat
caggctcaaacaggtcctgaaggcacaaaaagggcagaaatttgtcctcaccaggtggct
gggctgattgacctggactatcaagatgaaattagtctactaatccataacagagctatg
cagcaccaaattcagaaatttacaaatgtgcttgatggcacagagagagttcagaagtac
tcactgagtgatattgctgcttcagccataggaagtcataagatgccttgcagctttgac
ttaagcctcgtggagcaattgctctggggccatcagctaccagataagaagtctgactac
tctgagatcacgatgcagatgacttatcctcagcaaccatatgaggaccccaagcaaaag
ccatcagctgaacctgtcatatcccagaactgtgaaagagaataa

>gi568815584r:69785343_69986140|GENSCAN_predicted_peptide_3|169_aa
MQAAKRPSDEWEGKAEGGEEKEKEEEEEEEEEEEEVEEVAVAVQARQSGMECDSPQFFGA
SIAPSQSGPNLELKQVAGGSQSGLLIPLAPVIEYVAQPEAVRSERGCLEGPLLWPQKPHS
RSPQAPLSMRTVDPKAKEKSKKLGPDAMQLTPKFASKLGVREKLRIPKH

>gi568815584r:69785343_69986140|GENSCAN_predicted_CDS_3|510_bp
atgcaagctgcaaagaggcccagtgatgaatgggaggggaaagcggaaggtggggaggag
aaggagaaggaggaggaggaggaggaggaggaggaggaggaggaggtggaggaggtggca
gtggcggtacaagcaaggcagagtgggatggagtgtgacagcccccaattttttggtgca
tccattgctccctcacaatcaggccccaacttagagctgaagcaggtggcaggtggaagc
cagtcagggcttctcattcctctggctccagtaattgagtatgtggctcagccagaagca
gtgaggtcagaaagagggtgccttgaaggcccccttctgtggcctcagaaaccacactcc
cgcagtccccaggctcccctcagcatgaggacagtggatccaaaggcaaaggagaagagt
aagaagctggggcccgatgccatgcaattaacccccaagtttgcttcaaaacttggtgta
agagaaaaactgaggatccccaagcactaa

>gi568815584r:69785343_69986140|GENSCAN_predicted_peptide_4|71_aa
MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRITIRATTYEHLGWALYMISYSNENKKL
GLLKAILQMTK

>gi568815584r:69785343_69986140|GENSCAN_predicted_CDS_4|216_bp
atgctgcccgcgcgctgcgcccgcctgctcacgccccacttgctgctggtgttggtgcag
ctgtcccctgctcgcggccaccgcaccacaggccccaggataacaataagagctaccact
tatgaacatctgggctgggcactttacatgatctcttactcgaacgagaacaagaagttg
ggtcttttaaaagccattttacagatgacaaagtga

>gi568815584r:69785343_69986140|GENSCAN_predicted_peptide_5|266_aa
MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRY
IRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEK
KAAGKGDVPKKRPPVLRAGVNTVTTLVENKKAQLVVISHDMDPIELVVFLPALCRKMGVP
YCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGN
VLGPKSVARIAKRKKAKAKELATKLG

>gi568815584r:69785343_69986140|GENSCAN_predicted_CDS_5|801_bp
atgccgaaaggaaagaaggccaagggaaagaaggtggctccggccccagctgtcgtgaag
aagcaggaggctaagaaagtggtgaatcccctgtttgagaaaaggcctaagaattttggc
attggacaggacatccagcccaaaagagacctcacccgctttgtgaaatggccccgctat
atcaggttgcagcggcagagagccatcctctataagcggctgaaagtgcctcctgcgatt
aaccagttcacccaggccctggaccgccaaacagctactcagctgcttaagctggcccac
aagtacaggccagagacaaagcaagagaagaagcagagactgttggcccgggccgagaag
aaagctgctggcaaaggggacgtcccgaagaagagaccacctgtccttcgagcaggagtt
aacactgtcaccaccttggtggagaacaagaaagctcagctggtggtgatttcacacgac
atggatcccatcgagctggttgtcttcttgcctgccctatgtcgtaaaatgggggtccct
tactgcattatcaaggggaaggcaagactgggacgtctagtccacaggaagacctgcacc
actgtcgccttcacacaggtgaactcagaagacaaaggcgctttggctaagctggtggaa
gctatcaggaccaattacaatgacagatacgatgagatccgccgtcactggggtggcaat
gtcctgggtcctaagtctgtggctcgtatcgccaagcgcaaaaaggcaaaggctaaagaa
cttgccactaaactgggttaa

>gi568815584r:69785343_69986140|GENSCAN_predicted_peptide_6|607_aa
MEHPPVLAVQRVALPSRSSEPELFLNPPTDEETEAHRGMYLDQGPRTKDWIPVAPGVREP
SPLGPGPSSLWLLVVGGTVEEGSRKHRPTCKKDFTKSKTVDQAPTLCARHQMLNIQFLIS
DRDPQCNLHCSRTQPKPICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRL
ERAQALEQAKKPQEAVFVPECGEDGSFTQNTSCIHSSVYQIGENSSLTFLEKREESGHLQ
RDWFPLWFPRKARVIGRRVKEEATKKRVWEVQCHTYTGYCWCVTPDGKPISGSSVQNKTP
HIQILFTKARLALWACDLCSCYPEILNNSVFESDGTVKMRLQGDQGKALGPASSAYAMGW
EEEAKSPTLNAGDKDLENLLPPNAGAPRRCGSGTGDTTTHQKTGTNGPDGLLLFPWAKMR
KWLEREVEENLQRSSRLLSEGHRTRVVKAEELSLSGSIAVILCLQKERCEIQGLIILKFL
RKGNGTRIAETILKKKTKVGGTILSDFKMNKARVLEIVWYLWSNRCMNQWNRIEDPETDP
QTNGALAIGHPQTKQIKLTNRPQSLNLNLRPDMKMNSKWIVDLNVKCEAIKTFRRKQEKI
FTTKNII

>gi568815584r:69785343_69986140|GENSCAN_predicted_CDS_6|1824_bp
atggagcatccgcctgttctggcagtccaaagagtggctttgccatcccgttcctcagaa
cccgagctgttcctcaaccctccaacagatgaggaaactgaggctcatagaggtatgtat
cttgatcaaggtccaaggaccaaggactggatcccagtggcacctggtgtaagagagcct
tctcccctgggccctggcccatcatccctgtggctgctggtggtggggggcacagtggag
gagggaagtcggaaacaccggcccacctgcaaaaaggacttcacaaagtcaaaaactgtt
gaccaagcacctactctgtgtgccagacaccagatgctgaacatccagtttctaataagt
gaccgtgacccacagtgcaacctccactgctccaggactcaacccaaacccatctgtgcc
tctgatggcaggtcctacgagtccatgtgtgagtaccagcgagccaagtgccgagacccg
accctgggcgtggtgcatcgaggtagatgcaaagatgctggccagagcaagtgtcgcctg
gagcgggctcaagccctggagcaagccaagaagcctcaggaagctgtgtttgtcccagag
tgtggcgaggatggctcctttacccagaacacaagctgcattcattcatcagtgtatcaa
attggagagaacagcagcctcacatttctggagaaaagagaagaaagtgggcacctgcag
agagactggtttcctctctggtttcctaggaaagcaagggtgattggtaggagagtgaaa
gaagaagcaacaaagaagcgagtctgggaggtgcagtgccatacttacactgggtactgc
tggtgtgtcaccccggatgggaagcccatcagtggctcttctgtgcagaataaaactcct
cacatccagattctcttcactaaggcgaggctggctttgtgggcatgcgacctgtgcagt
tgctatcctgaaattctgaataattctgtctttgagtctgatgggacagtgaagatgcga
ttgcagggagaccaaggtaaagccctgggccctgcctccagtgcttatgccatgggatgg
gaagaagaggcgaagtcacccactctgaatgcaggagataaggatctggagaacctgctg
cccccaaatgcaggtgctccaagaagatgtggaagtggaacaggtgataccaccacccac
cagaaaacagggaccaatgggccagatgggctactgctctttccctgggcaaaaatgaga
aagtggttggaaagggaagtggaggaaaacctccagcggagcagcaggcttctctcagag
ggccacagaactcgtgtggtaaaggccgaggaactgtcactctcaggttccattgcagtg
atcctgtgcttgcagaaagaaagatgtgagattcaagggctgattattctcaagtttctt
cggaaaggcaatggaactagaatagctgaaacaattttgaaaaagaaaactaaagtggga
ggaaccattttatctgattttaagatgaataaagctagagttctagagatagtgtggtat
ttgtggagtaacagatgcatgaatcaatggaacagaatagaggacccagaaacagatcca
caaacaaatggtgctctagcaattggacatccacagaccaaacaaataaaattaacaaat
cgaccccaaagcctcaacctaaacctcagacctgatatgaaaatgaattcaaaatggatc
gtagacttaaatgtaaaatgtgaagctattaaaacttttagaagaaaacaagagaaaatc
ttcaccaccaaaaacataatctag