GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:13:13

Sequence gi568815584f:88724708_88977407 : 252700 bp : 39.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -   1971   1834  138  2  0   66   86   114 0.145   7.66
 1.07 Intr -  11858  11657  202  0  1   71  115   189 0.822  17.32
 1.06 Intr -  14307  14172  136  0  1  100   85   108 0.996  10.92
 1.05 Intr -  15865  15680  186  1  0   56   87   104 0.960   6.06
 1.04 Intr -  21634  21478  157  0  1   50   89    62 0.445   1.59
 1.03 Intr -  25349  25267   83  2  2   61   60    86 0.515   0.62
 1.02 Intr -  29964  29805  160  2  1   98   91   104 0.903  10.77
 1.01 Init -  42063  42041   23  0  2   73  119     2 0.549   1.17
 1.00 Prom -  51801  51762   40                              -5.95

 2.00 Prom +  54554  54593   40                              -7.15
 2.01 Init +  57424  57945  522  0  0   48   87   276 0.630  18.40
 2.02 Term +  67512  67916  405  2  0   54   46   442 0.216  30.80
 2.03 PlyA +  69141  69146    6                               1.05

 3.00 Prom +  75770  75809   40                              -5.35
 3.01 Init +  78659  78810  152  1  2   82   45   101 0.117   4.76
 3.02 Intr +  94476  94544   69  0  0  132   75    43 0.314   4.78
 3.03 Intr +  95879  95907   29  2  2   92   82    25 0.212  -0.86
 3.04 Intr +  99867 100114  248  1  2   94   86   163 0.173  12.96
 3.05 Intr + 108986 109015   30  1  0   95  103    46 0.059   4.21
 3.06 Intr + 114745 114865  121  0  1   45  113   136 0.104  10.95
 3.07 Intr + 116330 116489  160  0  1   62   51   112 0.137   3.02
 3.08 Intr + 132483 132570   88  0  1   62  106    91 0.668   7.35
 3.09 Intr + 136515 136625  111  2  0   83   76    55 0.915   3.46
 3.10 Intr + 140500 140590   91  0  1   44   81    91 0.728   2.65
 3.11 Term + 141810 141952  143  1  2   86   41   117 0.949   3.91
 3.12 PlyA + 142596 142601    6                               1.05

 4.00 Prom + 144290 144329   40                              -5.75
 4.01 Init + 145355 145491  137  1  2   48   55   152 0.770   7.56
 4.02 Intr + 146842 147016  175  1  1   49   68   181 0.998  11.22
 4.03 Intr + 147623 147745  123  1  0   56   82   160 0.973  12.06
 4.04 Term + 152587 152703  117  0  0   81   38    72 0.161  -0.94
 4.05 PlyA + 153258 153263    6                               1.05

 5.03 PlyA - 153312 153307    6                               1.05
 5.02 Term - 159433 159324  110  2  2   88   47    76 0.778   1.19
 5.01 Init - 160101 159666  436  0  1   54   -8   303 0.312  13.67
 5.00 Prom - 166815 166776   40                              -1.15

 6.00 Prom + 172943 172982   40                              -5.25
 6.01 Init + 185562 185967  406  2  1   60   79   236 0.725  16.70
 6.02 Intr + 189805 189938  134  2  2   48  116    68 0.795   5.04
 6.03 Intr + 190006 190075   70  0  1   -1   61   108 0.487  -2.96
 6.04 Intr + 191090 191260  171  0  0   72  109    58 0.419   5.29
 6.05 Intr + 196068 196108   41  1  2  135   31    44 0.173   0.42
 6.06 Intr + 197420 197611  192  1  0   97   52   124 0.366   8.47
 6.07 Intr + 202183 202372  190  0  1   55   78    98 0.044   3.74
 6.08 Intr + 221524 221672  149  2  2   -6   94   150 0.036   5.23
 6.09 Intr + 221928 222011   84  2  0    9   35   156 0.034   1.50
 6.10 Intr + 227721 227799   79  2  1   80   82    69 0.036   3.71
 6.11 Intr + 232261 232444  184  2  1   61  101   159 0.416  12.42
 6.12 Intr + 237713 237784   72  2  0   76   80    54 0.180   1.00
 6.13 Intr + 243519 243692  174  0  0   24   87   112 0.037   2.83
 6.14 Intr + 249472 249646  175  1  1   38   68   145 0.300   6.52
 6.15 Term + 250607 250666   60  1  0   93   45    38 0.199  -3.17
 6.16 PlyA + 251172 251177    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 114781 114865   85  0  1   60  113   127 0.878  13.43
S.002 Term + 116330 116493  164  0  2   62   32   126 0.834   1.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:88724708_88977407|GENSCAN_predicted_peptide_1|362_aa
MPLKLQNCLALHPERVLVATGQVGKEPYICIWDSYTVQTISVLKDVHTHGIACLAFDLDG
QCSVKAVIDNARRNECGYIPVKLYLQKHSFSLICLPFYSFLDFLDINQRLVSVGLDSKNA
VCVWDWKRGKMLSMAPGHTDRFWSLCGNALTPKRGVFGKTGDLQTILCLACARDELTYSG
ALNGDIYVWKGINLIRTIQGAHAAGIFSMNACEEGFATGGRDGCIRLWDLTFKPITVIDL
RETDQGYKGLSVRSVCWRGDHILVGTQDSEIFEIVVQERNKPFLIMQGHCEGELWALAVH
PTKPLAVTGSDDRSVRIWSLVDHALIARCNMEEPIRCAAVNADGIHLALGMKDGSFTVLR
VS

>gi568815584f:88724708_88977407|GENSCAN_predicted_CDS_1|1086_bp
atgcccctcaagctgcaaaactgccttgcattgcatcctgaacgagtgttggtagcaaca
ggacaagttgggaaagagccttatatttgtatttgggattcatacactgtgcagaccata
tcagttttaaaggatgttcatacacatggtatagcttgcttggcgtttgacttagatgga
cagtgcagtgtgaaagcagtcatagacaatgcacgaaggaatgagtgtggctatattcca
gtaaaactttatttacaaaaacatagtttctctttgatttgtttgcctttttattccttc
ctggacttcttggacataaatcagcgcttggtttcagttggacttgattcaaagaatgca
gtttgtgtttgggactggaaaaggggaaaaatgttgtctatggctcctggtcatacagat
agattctggagtttatgtggaaatgctctgaccccaaaacgaggtgtctttggtaagacg
ggtgaccttcagacaatactgtgcctagcctgtgcaagggatgaattaacatattctggt
gcactcaatggggatatatatgtttggaaaggaatcaatcttatacgaacaatacaagga
gcccatgctgcaggaatttttagcatgaatgcttgtgaagaaggctttgctactggtggc
agagatggttgtattcgtctttgggatttaacttttaaaccaattactgtgattgatctc
agggaaacagaccagggatacaaaggtttgtctgtaaggagtgtgtgttggcgaggtgac
cacattctagttggaacacaggacagtgaaatttttgaaattgtggtgcaagaaagaaat
aaaccttttctaattatgcaagggcattgtgaaggtgaactttgggcacttgctgtccat
cctactaaacctttggctgtgactggaagtgatgatcgttcggtcaggatatggagccta
gtagatcatgcattaatagcaaggtgtaatatggaagaaccaattcgttgtgcagctgtc
aatgcagatggaatccatcttgcccttggaatgaaggatggctcattcactgtacttaga
gtaagn

>gi568815584f:88724708_88977407|GENSCAN_predicted_peptide_2|308_aa
MDNKVHPEVVSDGEEKLVGNWSKDQSYYAKRLAAFCPCPRDLWNFELKRDDLGYLVEEIS
KRQRIQEEAEHESLEIFQPDDAVEKKNPFSGEKFKPATEIYIRTRSQRLITKTKRKTSPG
HVRDFCGSPSHHRLGGLRGKTGFLCQVQDTSATYSLETWCPVSPPLQLWLKEAKERSRRP
EEPAGANSGSGLQGDGGGPRSPVPDDVVAVAPVELLPVLPRAVHHADPRHEVYDLLGRSV
VEVVAALVAPVAVHPLEPQVAARGAPGRHVGAPTRRSRSGPRRRREAAAARQRKPSRWLP
GLPASRVL

>gi568815584f:88724708_88977407|GENSCAN_predicted_CDS_2|927_bp
atggacaataaggtccaccctgaggtggtctcagatggagaagagaaacttgttgggaac
tggagtaaagatcaatcttactatgcaaagagactggcagcattttgcccctgccctaga
gatctgtggaactttgaacttaagagagatgatttagggtatctggtggaagaaatttct
aagcgacaaagaattcaagaggaagcagagcatgaaagtttggaaatttttcagcctgat
gatgcagtagaaaagaaaaacccattttctggggagaaattcaagcctgctacagaaatc
tacataagaacgaggagccaaaggctaatcacaaagacaaagaggaaaacgtctccaggc
catgtcagagacttttgcggcagcccctcccatcacaggctcggaggcctcagaggaaaa
actggtttcctgtgccaggtccaagacacctctgctacatacagcctagagacttggtgc
cctgtgtccccaccactccagctgtggctaaaagaggccaaggagcggtcacggcgtcca
gaggaacccgcgggtgcaaactccgggagcggcttgcagggtgacggcggcggcccccgc
tccccggtacctgatgatgtcgtcgctgtggccccggtagaacttctgcctgtgctcccg
cgggctgtacaccacgccgacccccgccacgaagtatacgatctccttggccgcagtgta
gtagaggttgttgcggcactggtggccccggtagccgtacacccactcgagccgcaggtg
gcagctcggggcgctccgggccgccatgtcggggcgcccacccgccgctcccgctcgggc
ccgcggcggcgacgggaggcggcggcggcccggcaacgaaagccctcccgctggctgccg
ggacttcccgccagccgcgtcctctaa

>gi568815584f:88724708_88977407|GENSCAN_predicted_peptide_3|413_aa
MKAEICKSRTVKDWHNHQKLGEGNKTDSPPQPSEGTNTANTLILDFWPLEMIACCWETFP
QRLTAELFMNPTHRWHGYKNQSVGALRAPLGQGPSRRGLPGRVGRRQLFTPRPPLSWSAG
PSLAAPAAMSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQEPDPELPVHQAAWI
LKARALTEMVYIDEIDVDQEGIAEMMLDENAIAQVPRQSHKLEDPLQVSSGPARRVEGQA
LWNRLSEHPEPPTQPALSPAPPEDLSGWERLGMYREAEKQFKSALKQQEMVDTFLYLAKV
YVSLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYERSSNFTVYEITLGVDGKYDPSSSS
ESEVLEAYTVAIDPLCESKITTEMRQQPSSSCIDYTAPLLYLGLGDTYLEELN

>gi568815584f:88724708_88977407|GENSCAN_predicted_CDS_3|1242_bp
atgaaggcagagatttgcaagtcaaggactgtcaaggactggcacaaccaccagaagcta
ggagaagggaataaaactgattctcccccacaaccctcggaaggaactaacactgccaac
actttgatcttggacttctggcctctagaaatgattgcatgctgttgggaaacttttcct
cagcggctgactgcagagctgtttatgaaccccacacacagatggcatggttacaagaac
cagagtgtaggcgcgctgcgggcacctctcggacaaggccccagccgtcgcgggttgccg
ggcagagtcggacgccgccagctcttcactccacgcccacctctctcctggagcgctggg
ccttcgctggccgcaccggcagccatgagctcggagatggagccgctgctcctggcctgg
agctattttaggcgcaggaagttccagctctgcgccgatctatgcacgcagatgctggag
aagtccccttatgaccaggaaccagatcctgaattgccagtgcatcaggcagcttggatc
ttaaaagcaagagcgctaacagaaatggtatacatagatgaaattgatgtagatcaggaa
ggaattgcagaaatgatgctggatgaaaatgctatagctcaagttccacgccaatcacac
aagctggaagacccattacaggtttcctcaggcccagcacgcagagtggaaggccaggca
ctatggaacaggctatcagaacacccagaaccgcctacacagcccgccctatcaccagct
cctccggaagatttgtcaggctgggaacggttgggaatgtatcgtgaagcagaaaaacag
tttaaatcagccctgaagcagcaggaaatggtagatacatttctgtacttggcaaaagtt
tatgtctcattggatcaacctgtgactgctttaaatcttttcaaacaaggcttagataag
tttccaggagaagtaaccctgctctgtggaattgcaagaatctatgagaggtcttcaaac
tttactgtgtatgaaattaccttgggagtggatgggaagtatgacccatcctcttcctct
gaatcagaagtcctggaagcctacacagtggccattgaccctctctgtgaaagtaaaatc
accacagagatgagacaacaaccaagttccagctgcattgactataccgccccccttttg
tacttagggcttggtgacacctatttggaagaacttaattaa

>gi568815584f:88724708_88977407|GENSCAN_predicted_peptide_4|183_aa
MNNMSSAAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNGQLFN
NLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCFRLAL
VNNNNHAEAYNNLAVLEMRKGHVEQIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHF
AML

>gi568815584f:88724708_88977407|GENSCAN_predicted_CDS_4|552_bp
atgaacaatatgtcatcagcagcagaatattacaaagaagttttgaaacaagacaatact
catgtggaagccatcgcatgcattggaagcaaccacttctattctgatcagccagaaata
gctctccggttttacaggcggctgctgcagatgggcatttataacggccagctttttaac
aatctggggctgtgttgcttctatgcccagcagtatgatatgactctgacctcatttgaa
cgtgccctttctttggctgaaaatgaagaagaggcagctgatgtctggtacaacttggga
catgtagctgtgggaataggagatacaaatttggcccatcagtgcttcaggctggctctg
gtcaacaacaacaaccacgccgaggcctacaacaacctggctgtgctggagatgcggaag
ggccacgttgaacagattggagatctgcagagaagctatgttgctgcgcagaagtctgaa
gcagcatttccagaccatgtggacacacaacatttaattaaacaattaaggcagcatttt
gctatgctctga

>gi568815584f:88724708_88977407|GENSCAN_predicted_peptide_5|181_aa
MWECLELPRDLLKGFDLKADNDMDNEVQAKVVLDGNEELVGNWNKGHSCYALAKRLAAFY
PCPRDLWNFELERGDLGYLVEEISKQQSIQEEAEHKSLENLQPDNVIENKNPYSEEKFKP
AAEIGISNKEPNINHQDNGENISRACVQKTKIEVSEPPPRFQRMYGKVWQTCNSYYLRAS
L

>gi568815584f:88724708_88977407|GENSCAN_predicted_CDS_5|546_bp
atgtgggaatgtttggaacttcctagagacttgttgaaaggctttgacctaaaagctgat
aatgatatggacaatgaagtccaggctaaggtggtcttggatggaaatgaagaacttgtt
gggaactggaacaaaggtcactcttgctatgctttagcaaagaggctggcagcattctac
ccctgccctagagacctgtggaactttgaacttgagagaggtgatttagggtatctggtg
gaagaaatttctaagcagcaaagcattcaagaggaggcagagcataaaagtttagaaaat
ttgcagcctgacaatgtgatagaaaacaaaaacccatattctgaggagaaattcaagcct
gctgcagaaattggcataagtaacaaggaaccaaatattaatcaccaagacaatggggaa
aatatctccagggcatgtgtgcagaagacaaaaattgaggtttcggaacctccacctaga
tttcagaggatgtatggaaaagtgtggcagacttgtaacagttactacttgagagcatca
ctatga

>gi568815584f:88724708_88977407|GENSCAN_predicted_peptide_6|726_aa
MGASVLSKIASYDFYGSSRLSSSAGKNTTLGFHVSAVGVFISGAPLDGVCCLRSFGAGAC
PECQEHALPRLSHQPCCERVWHPLESSRCRHDVVVPAIQGTATTIPGSCRFLHGMPVEDD
SINHQGCLGHSLSPQAHSTLILETTCKKGGGKIGLVQGHSENCLAGEKLGDASKRGLSQK
QQDERQEYKDIGTATRKDVSLGAECYHGGCSPLRAVVRYRKSNPVFPYHLFMSLIFNLTV
TEKNEFGWFHDKPKKAHLKAAPPLAVTTMSLECMDLQLKVVTNSTPGTWGNKPFLKEDLN
GVSQWPPQFTFVHLNLVFIYILEAASSASWGEPRSSVSKHENRLMQAYGTAMRVNKLQLY
VIKWMNLINMMLGENRRKTIGSVKFHSREVQKQSRLFNALKKGGREGRRRKRRCWRGKRE
KKEREDEEEKEEEEEEKGEKEEREREKNKEESALDLRAQGDGKQAYRHPLTEHLAGAQRC
QPDREIIDEEEQRSERSHERDKTFSELLEATRGWGVGTNAHEQCQPVIVWARYERLFGEG
SGFEKEFDLILIKFPLLNKRTLKHREIDSQNHHSVALAVGSKWPFRLMLIGPLQPTAGML
RGWWKKAPGGARLSMADTRRDVLCMEGMQILTRKVLWNLEQNGKEILLLKRERPGQEHST
LGNGKSPVWLQNKSLGRGRVSTQGLRPRGEGPTGIWAFMNLGFQESWPHGFLAILHTPDS
LPLQGL

>gi568815584f:88724708_88977407|GENSCAN_predicted_CDS_6|2181_bp
atgggggcttccgttctctctaagatagcatcctatgatttctatgggtcctctagactg
tcctcgagtgccggtaagaacaccactcttgggttccatgtgtcagctgttggggtcttc
atttctggagccccgctggatggtgtctgctgcctgaggagttttggggctggtgcctgc
cctgagtgccaagagcatgctctcccacggctttcccaccagccctgctgtgaaagggtc
tggcacccactagaaagctccagatgccgtcatgacgtggttgtgcctgccatccagggc
actgccaccaccatccccgggagctgtcggttcctccatggtatgccagttgaagatgac
agcatcaaccaccaaggctgcctgggccacagcctgtccccacaagcacattctactctt
attcttgagactacatgcaaaaaagggggagggaaaattgggttggttcaaggtcactca
gagaactgtcttgcaggggagaaacttggcgatgcaagcaagagagggttatcgcagaag
caacaggatgaaagacaagagtataaagatataggcactgctacccggaaagatgtctcc
ttgggggcagagtgttaccacggtggttgcagtccactaagggcagttgtgagataccgg
aagtcaaacccagttttcccttatcacctctttatgtcactgattttcaatttaacagtt
acagagaaaaatgaatttggctggtttcacgataaaccaaagaaagcacacctgaaggca
gctcctcccctggcggtcaccaccatgagtttggagtgtatggacttacagctgaaggta
gtcaccaacagcactccaggcacctggggaaacaagccctttctgaaagaggatctcaat
ggagtatcacagtggcccccacagttcacctttgtgcacttgaatctcgtcttcatatac
attctggaagcagcttcttctgcctcttggggggaacctagaagcagtgtatcaaaacat
gagaacagactaatgcaggcatacggcacagcaatgagagtgaacaaactacaactatat
gtgataaaatggatgaatctcataaatatgatgttgggtgaaaacagacgcaaaaccata
ggttctgtaaaattccattcacgtgaagtacagaaacagtcaagactattcaatgccctt
aaaaaaggaggaagggagggaagaagaagaaagagaagatgttggagagggaagagagag
aagaaggaaagagaggatgaagaggagaaggaggaagaggaggaagagaaaggggaaaag
gaggaaagagaaagagagaagaacaaggaggagtcagccctagatctgcgagcccaaggt
gatggaaaacaggcctatcggcacccccttactgaacaccttgcaggtgcccagaggtgt
caacctgacagagaaataattgatgaagaagaacaaagaagtgaaagatcacatgaaaga
gacaaaaccttctcagaacttttagaagccaccaggggctggggagtgggaacgaatgca
catgaacaatgccaacctgtgattgtgtgggccagatacgaacgactctttggagaaggc
tctggatttgagaaagaatttgacctaattctcattaaattcccattgttgaataagaga
actctgaaacatagagaaatagactcccagaatcaccactcagtggccctggctgtgggc
tctaagtggccctttaggcttatgttgattgggcccctgcaacccacagcaggcatgctg
agaggttggtggaagaaggcgccaggtggagcaagactaagcatggcagacacaagaaga
gacgtcctctgcatggaagggatgcagattttgacacggaaagtgctttggaatctggaa
caaaatgggaaagaaatactcttgctgaagagggaacggcctggacaagagcacagtaca
ttaggaaatggcaagagtccagtgtggctgcagaacaagagtctggggagaggtcgggta
tcaactcaaggcctgaggccaagaggtgaaggacctacaggaatctgggctttcatgaac
ctgggctttcaagaatcctggccacatgggttccttgctattcttcacaccccagattca
ctccctcttcagggcctgtga