GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:50:05

Sequence gi568815584f:87910848_88111858 : 201011 bp : 38.18% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    779    774    6                               1.05
 1.02 Term -   5439   5205  235  2  1   73   49   231 0.312  12.51
 1.01 Init -  17063  16891  173  2  2   68  106   110 0.702   9.83
 1.00 Prom -  22023  21984   40                              -6.55

 2.10 PlyA -  22582  22577    6                               1.05
 2.09 Term -  24031  23885  147  1  0   77   37   113 0.217   2.02
 2.08 Intr -  25383  25296   88  2  1   68   56    66 0.134   0.45
 2.07 Intr -  31465  31336  130  2  1   57   37   146 0.136   5.23
 2.06 Intr -  32137  32106   32  0  2   45   94    35 0.402  -3.34
 2.05 Intr -  34886  34706  181  0  1   13   99   175 0.942   9.10
 2.04 Intr -  36407  36300  108  0  0   97   80    12 0.597   0.64
 2.03 Intr -  37031  36881  151  2  1   71   97   195 0.996  17.51
 2.02 Intr -  39084  38998   87  0  0  121   26    69 0.590   3.25
 2.01 Init -  39618  39559   60  0  0   56   20    19 0.605  -6.80
 2.00 Prom -  40172  40133   40                              -9.55

 3.00 Prom +  40652  40691   40                              -2.55
 3.01 Init +  42458  42917  460  1  1  101   29   257 0.835  17.06
 3.02 Intr +  43166  43374  209  0  2   42   28   139 0.169   1.17
 3.03 Term +  44027  44356  330  1  0   -2   54   302 0.239  11.47
 3.04 PlyA +  44422  44427    6                               1.05

 4.11 PlyA -  44457  44452    6                               1.05
 4.10 Term -  49290  49270   21  0  0  125   41     3 0.279  -3.37
 4.09 Intr -  52664  52537  128  0  2   68   52   166 0.954  10.48
 4.08 Intr -  54782  54658  125  1  2   42   80    71 0.968   1.01
 4.07 Intr -  57643  57488  156  0  0  132   88   105 0.987  13.10
 4.06 Intr -  65641  65511  131  1  2   47   86   141 0.642   8.37
 4.05 Intr -  71396  71358   39  2  0  112   93    13 0.587   1.70
 4.04 Intr -  73686  73547  140  1  2  139    7   183 0.779  14.56
 4.03 Intr -  75755  75642  114  0  0   87   91    91 0.984   8.80
 4.02 Intr -  81807  81616  192  1  0   -7   90   158 0.475   5.04
 4.01 Init -  82269  82074  196  0  1   49    8   361 0.238  21.34
 4.00 Prom -  86997  86958   40                              -5.45

 5.00 Prom +  87143  87182   40                              -6.95
 5.01 Sngl + 100001 101014 1014  1  0   68   42   458 0.977  35.96
 5.02 PlyA + 101145 101150    6                               1.05

 6.00 Prom + 103472 103511   40                              -3.75
 6.01 Init + 107548 107562   15  0  0   95  115    17 0.362   4.55
 6.02 Intr + 110439 110645  207  2  0  -18  115   143 0.260   4.75
 6.03 Term + 113242 113250    9  0  0  114   43     0 0.051  -4.68
 6.04 PlyA + 114884 114889    6                               1.05

 7.04 PlyA - 115414 115409    6                               1.05
 7.03 Term - 119748 119638  111  0  0   65   37   103 0.418   0.48
 7.02 Intr - 120283 120197   87  1  0   38   63    94 0.305   1.15
 7.01 Init - 126746 126624  123  2  0   85   84    83 0.719   7.82
 7.00 Prom - 132668 132629   40                              -1.45

 8.03 PlyA - 133173 133168    6                               1.05
 8.02 Term - 133882 133663  220  0  1   87   43   149 0.577   5.83
 8.01 Init - 145942 145680  263  1  2   74   63   151 0.013   7.78
 8.00 Prom - 163115 163076   40                              -6.05

 9.00 Prom + 166770 166809   40                              -6.05
 9.01 Init + 168344 168521  178  1  1   74   95   100 0.202   8.77
 9.02 Intr + 173190 173308  119  1  2  116   26    43 0.688   0.16
 9.03 Intr + 175981 176176  196  0  1   36   60   117 0.516   1.77
 9.04 Term + 178852 178916   65  2  2    7   55   217 0.561   7.37
 9.05 PlyA + 179113 179118    6                               1.05

10.03 PlyA - 179361 179356    6                               1.05
10.02 Term - 184497 184291  207  0  0   24   34   198 0.920   4.36
10.01 Init - 185286 185197   90  0  0   74   93    27 0.883   2.39
10.00 Prom - 190744 190705   40                              -3.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  19704  20141  438  2  0   61   44   218 0.805  10.71
S.002 Sngl - 142934 142659  276  2  0   64   37   223 0.924   9.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_1|135_aa
MLCAGAGKWETVFWGMCQTPGEAPPKALLKLTRKPPFVVLVKLSGKPPVGLLVKIPANAP
APCYHHHQCNCVHSHRQGPHPRSRAVSIAAVNAYIEAGTLAPASTLLQSMSVCSAGLLLP
ATGTCKRGWMWLLPS

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_1|408_bp
atgctgtgtgctggggctggcaagtgggaaactgtcttctggggtatgtgtcagactcct
ggggaagctcctcctaaggcgctgctgaaactcactaggaaaccaccctttgtggtgctg
gtgaaactttctgggaaaccacctgtaggattgttggtgaaaatcccggcaaacgcccca
gccccgtgctaccaccaccaccagtgcaactgtgtgcacagtcaccggcagggaccccat
ccccggagtcgtgctgtctccatcgctgctgtgaatgcctacatagaggctggcaccctg
gcacctgctagcaccctgttgcagtccatgagcgtgtgctctgctgggctgctgctgcct
gctactggcacatgcaaacgaggatggatgtggctgctaccgtcctag

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_2|327_aa
MLCDFEEHLQKSLARKLFLVSEIPELQVWYTKLGKTSERFLFKQLDSLWLLDSDGSFTLS
LHEDELFTLTTLTTGRKGSYPLPPKSQPFPSTYKDDFNVGRSVLKLLEKFLVIGDLGKPL
GKKLEDMVIVVIFLVNYPFFSEAPNFADQTGVFEYFTNIEDPGEHHFTLRQVLNQRPITW
AADASNTISIIGDYNCTFKLLMNQKGDRYFIGENGPPSGIPGRAASASPGNLLDMHIQGA
APDVLNHAVGEVRKDLTEWVVLECRPECWEEQFEQTKWQGHFTSGMLNDKSLWTDIPVNF
PKNGWAAIGTHSFEFAQFDNFLVEATR

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_2|984_bp
atgctctgtgactttgaggaacacttacaaaagtcacttgcaagaaagttgttcttggtg
agtgaaataccagagctacaggtatggtataccaaacttggaaaaacatccgaaagattt
ctttttaagcagctggattctctatggctccttgacagcgatggcagtttcacactgagc
ctgcatgaagatgagctgttcacactcaccactctcaccactggtcgcaaaggcagctac
ccgcttcctccaaaatcccagcccttcccaagtacctataaggatgatttcaatgttgga
agatctgtcctaaagttgttagaaaagtttttggttataggtgatttaggaaaaccactt
ggaaaaaagttagaagacatggtcattgtagttatattcctagtgaattacccatttttt
agtgaagctccaaactttgctgatcaaactggtgtatttgaatattttacaaatattgaa
gaccctggcgagcatcacttcacgctacgccaagttctcaaccagagacccattacatgg
gctgccgatgcatccaacacaatcagtattataggagactacaactgcactttcaaactt
ctgatgaaccagaaaggagacagatacttcataggggaaaatggtcctccaagtggcatt
cctggacgagcagcatcagcatcacctgggaacttgttagacatgcacattcaaggggct
gccccagatgtactgaatcacgctgtgggggaggtgaggaaagacctcactgagtgggta
gtacttgagtgcagacctgaatgctgggaagaacaatttgagcagaccaagtggcagggt
catttcacctctggcatgctgaatgacaagtctctgtggacagacatccctgtgaatttt
ccaaagaatggctgggctgcaattggaactcactcctttgaatttgcacagtttgacaac
tttcttgtggaagccacacgctaa

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_3|332_aa
METEPKASYGKIRISEENSIQLDDFTEAYESGQNQAYSLEHFSPVFPKTENSHIHINSDK
GPEENTGSQELFSSEDELPPNEIRIELCSSGILCSQLNTFHKSAIKRSCTSEDKVGQSEA
LSRVLQVAKKMKLISNAGDSVVEMDQRNVSEFKDVVIHEDQWVGETVLQSTFSSQLLNLG
SYSSIQPEEYSSVVSDVVLQDLLAQVSSKHSYLRDLPPRQPQRKIYYRPALMTVVDGRHD
VYIRVDSKLIEKILLNIFADCLNRVIVTSSEITYGMVMADLLHSLSAVSAEPCVSKIQSL
FVLDESSYPLQQDFSLLDFYPDTVKHGADALF

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_3|999_bp
atggagactgaaccaaaggcaagttacgggaagataagaatatctgaagagaattccatt
caacttgatgattttacagaagcatatgaaagtggacaaaaccaagcatattctcttgaa
cattttagtcctgtttttcctaaaacagaaaatagccacattcacataaactctgacaaa
ggtcctgaagaaaatacaggatctcaagaacttttcagttctgaagatgaactgccacca
aatgagatacgtattgagttgtgtagctcaggaatactgtgttcccaactaaacaccttc
cacaaaagtgctattaaaagaagctgcacctctgaagataaagtgggccagtctgaagct
ctatctagagtccttcaagtagctaagaaaatgaagttgatttctaatgcaggagattct
gttgtagaaatggatcagaggaatgtgtctgaatttaaggatgttgttattcatgaggac
caatgggttggcgagacagtactacaatcaacatttagcagtcagttattaaatcttggg
agttattcatctattcagcctgaagaatattccagtgtagttagtgatgttgtacttcaa
gacctactggcacaggtgtcctcaaaacattcctacctcagagatcttcctccgaggcag
cctcagaggaaaatatactataggccagctttaatgactgtagttgatggaagacatgat
gtttacatccgtgtagactcaaagctgatagagaagattcttctcaacatttttgcagac
tgcctcaacagagtgatagttacttcctcagagatcacctatgggatggtcatggcagac
ctgttacactccttgtcggcagtcagcgcagaaccttgtgtatcaaagattcagagcctt
tttgtgttagatgaaagcagctatccattacaacaagatttctccctcctggatttttat
cctgacactgtaaagcatggagccgatgcccttttctga

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_4|413_aa
MTAAAGSAGRAAVPLLLCALLAPGGAYVLDDSDGLGREFDGIGAVSGGGVSGKLRGYAGG
GKSPPRSGAQAVFIAEMAVGERRSRKGQGVRERPCAKENAPVGCFGCVSPFWRSWWVVES
LSPVQLLVQDGTEPSHMHYALDENYFRGYEWWLMKEAKKRNPNITLIGLPWSFPGWLGKG
FDWPYVNLQLTAYYVVTWIVGAKRYHDLDIDYIGIWNERSYNANYIKILRKMLNYQGLQR
VKIIASDNLWESISASMLLDAELFKVVDVIGAHYPGTHSAKDAKLTGKKLWSSEDFSTLN
SDMGAGCWGRILNQNYINGYMTSTIAWNLVASYYEQLPYGRCGLMTAQEPWSGHYVVESP
VWVSAHTTQFTQPGWYYLKTVGHLEKGGSYVALTDGLGNLTIIIETMPHPSVW

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_4|1242_bp
atgactgcggccgcgggttcggcgggccgcgccgcggtgcccttgctgctgtgtgcgctg
ctggcgcccggcggcgcgtacgtgctcgacgactccgacgggctgggccgggagttcgac
ggcatcggcgcggtcagcggcggcggggtgagcggcaagctgcggggatacgcggggggc
ggcaagagcccgccccgcagtggggcacaggctgtcttcatcgcggagatggcagtcggg
gagcgtcgctccagaaagggccagggagtgcgggagcgtccgtgtgcgaaagagaacgcc
ccagtgggatgctttggctgtgtctctcccttttggaggagttggtgggtggtggagtcg
ttaagtcccgtgcagttgttagtgcaggacggcactgagccctcccacatgcattatgca
ctagatgagaattatttccgaggatacgagtggtggttgatgaaagaagctaagaagagg
aatcccaatattacactcattgggttgccatggtcattccctggatggctgggaaaaggt
ttcgactggccttatgtcaatcttcagctgactgcctattatgtcgtgacctggattgtg
ggcgccaagcgttaccatgatttggacattgattatattggaatttggaatgagaggtca
tataatgccaattatattaagatattaagaaaaatgctgaattatcaaggtctccagcga
gtgaaaatcatagcaagtgataatctctgggagtccatctctgcatccatgctccttgat
gccgaactcttcaaggtggttgatgttataggggctcattatcctggaacccattcagca
aaagatgcaaagttgactgggaagaagctttggtcttctgaagactttagcactttaaat
agtgacatgggtgcaggctgctggggtcgcattttaaatcagaattatatcaatggctat
atgacttccacaatcgcatggaatttagtggctagttactatgaacagttgccttatggg
agatgcgggttgatgacggcccaggagccatggagtgggcactacgtggtagaatctcct
gtctgggtatcagctcataccactcagtttactcaacctggctggtattacctgaagaca
gttggccatttagagaaaggaggaagctacgtagctctgactgatggcttagggaacctc
accatcatcattgaaaccatgccccaccccagtgtctggtaa

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_5|337_aa
MNSTCIEEQHDLDHYLFPIVYIFVIIVSIPANIGSLCVSFLQAKKESELGIYLFSLSLSD
LLYALTLPLWIDYTWNKDNWTFSPALCKGSAFLMYMNFYSSTAFLTCIAVDRYLAVVYPL
KFFFLRTRRFALMVSLSIWILETIFNAVMLWEDETVVEYCDAEKSNFTLCYDKYPLEKWQ
INLNLFRTCTGYAIPLVTILICNRKVYQAVRHNKATENKEKKRIIKLLVSITVTFVLCFT
PFHVMLLIRCILEHAVNFEDHSNSGKRTYTMYRITVALTSLNCVADPILYCFVTETGRYD
MWNILKFCTGRCNTSQRQRKRILSVSTKDTMELEVLE

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_5|1014_bp
atgaacagcacatgtattgaagaacagcatgacctggatcactatttgtttcccattgtt
tacatctttgtgattatagtcagcattccagccaatattggatctctgtgtgtgtctttc
ctgcaagcaaagaaggaaagtgaactaggaatttacctcttcagtttgtcactatcagat
ttactctatgcattaactctccctttatggattgattatacctggaataaagacaactgg
actttctctcctgccttgtgcaaagggagtgcttttctcatgtacatgaatttttacagc
agcacagcattcctcacctgcattgccgttgatcggtatttggctgttgtctaccctttg
aagttttttttcctaaggacaagaagatttgcactcatggtcagcctgtccatctggata
ttggaaaccatcttcaatgctgtcatgttgtgggaagatgaaacagttgttgaatattgc
gatgccgaaaagtctaattttactttatgctatgacaaataccctttagagaaatggcaa
atcaacctcaacttgttcaggacgtgtacaggctatgcaatacctttggtcaccatcctg
atctgcaaccggaaagtctaccaagctgtgcggcacaataaagccacggaaaacaaggaa
aagaagagaatcataaaactacttgtcagcatcacagttacttttgtcttatgctttact
ccctttcatgtgatgttgctgattcgctgcattttagagcatgctgtgaacttcgaagac
cacagcaattctgggaagcgaacttacacaatgtatagaatcacggttgcattaacaagt
ttaaattgtgttgctgatccaattctgtactgttttgtaaccgaaacaggaagatatgat
atgtggaatatattaaaattctgcactgggaggtgtaatacatcacaaagacaaagaaaa
cgcatactttctgtgtctacaaaagatactatggaattagaggtccttgagtag

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_6|76_aa
MGGAKQEPRQGSITGGDTVDPQQTTRSPIILTVVSEASARGMPNGQTGHHLKGQRGPEDS
MRSSRLTSSQQRGQAT

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_6|231_bp
atgggaggagctaagcaagaaccaagacaagggagtataactggaggggacacagtagac
ccccagcagaccaccagatcaccaattatactgactgtggtctcagaagcttctgccagg
gggatgcctaatggacagacaggacatcatctcaaaggccagaggggaccagaagacagt
atgaggagcagcaggttgacatcctcacagcaaagaggacaggctacgtga

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_7|106_aa
MEPHRECAIGEIQQDEFLTFRLPIVLIYITPTLHRESEFQGPSAERHGITLVYCIDDVMV
IGNVNTLGDPLLACYRIFVEIECLIITSQDTKCELFLSPFSIAIKE

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_7|321_bp
atggagccacatcgtgaatgtgccattggagaaatacaacaggatgaattcttaactttc
aggctccctattgtcctcatatatattactccaactctccacagggaatctgagttccaa
gggccttctgcagaacgtcatggtataacacttgtctactgtattgatgatgtcatggtt
attggaaatgttaataccctaggtgacccactcctggcctgctaccggatatttgtagag
attgaatgcctaattataacatcacaagacaccaagtgtgagctgtttctgagtccattt
agtattgctataaaggaatag

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_8|160_aa
MGPNQDKICELSEKEFRRLITKLIKEAPEKGEVQLKEIKNMIQDMKGKIFGEIDGINKKQ
SHFWKSRTHLDKCKMHWKVSAMVSNKEKNLNVSCKRDEVFLAPGVQGGQRSKRGLLSPKA
FPFGNHLPPTQNKATVVGDEAKTMHAPSQPIQWLWSKCSV

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_8|483_bp
atgggtccaaaccaagacaaaatctgtgaattgtcagaaaaagaattcagaagattaatt
actaagctaatcaaggaggcaccagagaaaggtgaagtacaacttaaggaaataaaaaac
atgatacaggatatgaaaggaaaaatctttggtgaaatagatggcataaataaaaaacaa
tcacacttctggaaatcaaggacacacttagataaatgcaaaatgcactggaaagtctca
gcaatggtatcgaacaaggagaagaatctcaatgtttcttgtaaaagagatgaagttttt
ctggctcctggtgtacaaggagggcagaggtcaaaacgaggacttctatctcccaaagct
tttccttttggaaaccacctgccaccaacacagaacaaagccacagttgtgggagatgaa
gctaaaaccatgcatgctccatcccagcccattcaatggctttggagcaaatgttctgtc
tga

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_9|185_aa
MLLSSASIQRESEIQPPLLEAPTSKLCDSFLGTLLCGSGDDNVTALPSKPKFPHTDELLG
SSICRRSPTFCYYYVLQMSRREWGGREQEEERKNNVLKLFSKDNGLQLRQCSCKGHDADF
EDASFHIYSLKETNSANQLRELSLSCLKMRSQSAQHHDLGLVTPEEEEEEEEEEEEEEEG
GGGEI

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_9|558_bp
atgcttctgagctcagccagcatccagagagagagtgagatacagcctcctcttcttgaa
gcacccacttctaaactctgtgacagttttcttggaactctgttatgtggatctggagat
gacaatgtcacagcactcccctctaagcctaaattcccccacaccgatgaactattagga
tccagtatctgccggaggagccccaccttctgctactattatgttcttcagatgagtaga
agagagtggggagggagagagcaggaagaagaaaggaagaataatgtcttgaaattgttt
tctaaggataatggtctccagcttcgtcaatgttcctgcaaaggacatgatgctgacttt
gaagatgcaagcttccacatctacagcctcaaggaaacaaattcagccaaccaactgagg
gagctttccttgtcctgcctcaagatgagatcacagtctgcccaacaccatgatttaggc
cttgtgacacctgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagga
ggaggaggagagatttga

>gi568815584f:87910848_88111858|GENSCAN_predicted_peptide_10|98_aa
MTDGSSAALWLSLLELNLYIWILNRPGAILKRRETEGRWLCEDTEAQGEHHMKKKTETGV
MLLQAGNTKNCQPSPEARRGMEQMLPGSPRKEPTLLTS

>gi568815584f:87910848_88111858|GENSCAN_predicted_CDS_10|297_bp
atgactgatggcagctcagctgccctctggctctcactcctggagcttaacctttacata
tggatactaaacaggcctggtgcaatcctgaaaaggagagaaacagagggaagatggcta
tgtgaagacacagaggcacaaggagaacaccatatgaagaagaagacagaaactggagtg
atgcttctacaagcagggaacaccaagaattgccagccatcaccagaagctaggagaggc
atggaacagatgctccctgggagccctcggaaagaaccaacgctgctgacatcttga