GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:34:20

Sequence gi568815584f:50487830_50732327 : 244498 bp : 38.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1219   1214    6                               1.05
 1.02 Term -  28363  28212  152  2  2   92   43   166 0.994   9.59
 1.01 Init -  37583  37523   61  2  1   46   85    49 0.177   1.86
 1.00 Prom -  39533  39494   40                             -10.45

 2.03 PlyA -  39825  39820    6                               1.05
 2.02 Term -  40564  40370  195  1  0  113   36   111 0.958   4.83
 2.01 Init -  44220  44113  108  0  0   90  115   135 0.494  16.95
 2.00 Prom -  46947  46908   40                              -5.75

 3.00 Prom +  47450  47489   40                              -8.55
 3.01 Sngl +  49102  49851  750  0  0   46   37   286 0.462  15.22
 3.02 PlyA +  52439  52444    6                               1.05

 4.00 Prom +  57508  57547   40                              -4.35
 4.01 Init +  61297  61406  110  0  2  100   61    67 0.416   4.94
 4.02 Intr +  61455  61546   92  0  2    3   37   143 0.412  -0.58
 4.03 Term +  64020  64450  431  1  2   33   32   238 0.889   7.18
 4.04 PlyA +  64454  64459    6                               1.05

 5.03 PlyA -  68286  68281    6                               1.05
 5.02 Term -  72533  72253  281  0  2   98   46   209 0.652  12.32
 5.01 Init -  77288  77240   49  2  1   86   58    42 0.282   0.16
 5.00 Prom -  87122  87083   40                              -5.45

 6.00 Prom +  88140  88179   40                              -4.15
 6.01 Init +  94466  94520   55  1  1    8  109    12 0.422  -3.20
 6.02 Intr + 100002 100249  248  1  2   85   85   285 0.998  24.16
 6.03 Intr + 103112 103246  135  1  0   49   86   100 0.907   5.74
 6.04 Intr + 103706 103810  105  1  0   98   80    21 0.388   1.79
 6.05 Intr + 107747 107803   57  1  0   84   99    78 0.461   6.66
 6.06 Intr + 125430 125522   93  2  0   93   76    59 0.768   4.44
 6.07 Intr + 126544 126682  139  0  1   33   76    56 0.487  -1.98
 6.08 Intr + 132770 132897  128  0  2   64   64    86 0.506   3.28
 6.09 Intr + 134014 134070   57  0  0  112   68    29 0.732   1.46
 6.10 Intr + 135348 135419   72  2  0   55   94   112 0.980   7.18
 6.11 Intr + 138509 138802  294  1  0   50   16   155 0.626   0.78
 6.12 Intr + 140202 140633  432  2  0   51  110   374 0.905  28.82
 6.13 Term + 144400 144510  111  0  0   82   38    92 0.923   1.18
 6.14 PlyA + 147195 147200    6                               1.05

 7.06 PlyA - 147272 147267    6                               1.05
 7.05 Term - 147555 147354  202  2  1   48   49   162 0.963   4.18
 7.04 Intr - 153064 152921  144  0  0   60  100   186 0.991  15.48
 7.03 Intr - 157185 156915  271  1  1  133   60   114 0.990   8.78
 7.02 Intr - 177790 177350  441  2  0   81   70   232 0.013  13.20
 7.01 Init - 198623 198383  241  2  1   54   37   158 0.080   5.38
 7.00 Prom - 210718 210679   40                              -4.05

 8.07 PlyA - 211328 211323    6                               1.05
 8.06 Term - 217477 217097  381  1  0   22   49   445 0.156  27.85
 8.05 Intr - 217750 217530  221  2  2   48    7   236 0.087   8.60
 8.04 Intr - 234311 234163  149  1  2   31   61   118 0.184   2.36
 8.03 Intr - 235843 235641  203  1  2   79   25   198 0.831   9.76
 8.02 Intr - 238237 238124  114  1  0  109   63   169 0.998  16.22
 8.01 Intr - 241894 241694  201  1  0   81   80   209 0.917  17.96

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 119239 119340  102  0  0   47   95    84 0.827   5.29
S.002 Intr + 179904 180016  113  2  2   47   64   139 0.916   5.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_1|70_aa
MKGRDGFESYLEDDQKHLVIDSLPVPNGDKLGLQYGTGNRRKCVDLAYKFKLSGFADMSD
VKSVKERNKE

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_1|213_bp
atgaaaggaagggatggatttgagtcatatttagaagatgatcaaaaacacctggtaatc
gatagtttaccagttcctaatggagacaagcttggattacagtatggcactggaaataga
agaaagtgtgtggatttggcttataagtttaagctgtcaggatttgctgatatgtcagat
gtgaagagtgtgaaggaaagaaataaagaatga

>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_2|100_aa
MEAPLRPAADILRRNPQQDYELVQRVGSGTYGDVYKVSFEAEALKDSGFEILRNLLLCSS
IPQIPSEASIFPENPQEGEFNLILAVLWLKEEEEHKDSFR

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_2|303_bp
atggaggccccgctgcggcctgccgcggacatcctgaggcggaacccgcagcaggactac
gaactcgtccagagggtcggcagcggcacctacggggacgtctataaggtatcttttgaa
gcagaagctttaaaggactctggctttgagattcttcgtaatttacttttatgttcatca
ataccacagatcccctctgaagcttccatctttcctgagaatccccaagagggagagttc
aatcttatattggctgttctttggttgaaagaagaggaggaacataaagattcttttaga
taa

>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_3|249_aa
MEKKIPFSEEKFKQAAEICISNEKLNINSKDNGENAFRACQRSSWQTFPSQARRPRRKKW
FRWLGPGSLCCVQPRDLVPCFPAAPAAAERGQHRAGAVASEGASLQPWQLPRGVEPSSTQ
KSRIEVWESLPRFQMMYGNAWMSRQKFSAGVVPSRRTSARVVRKGNVGSEPPDRVPTEVL
PSGAVRRGPLSSRSQNGGSTDSLHRAPGKAADTQHGFPMKAARGRLYPAKPQGQSCPRPW
EPTSCISMT

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_3|750_bp
atggaaaagaaaatcccattttctgaggaaaaattcaagcaggctgcagaaatttgcata
agtaacgaaaagctgaatattaattccaaagacaatggggaaaatgccttcagggcgtgt
cagaggtcttcatggcagaccttcccatcacaggccaggagacctaggaggaaaaagtgg
tttcgttggctaggcccagggtccctgtgctgtgtgcagcctagagacttggtgccctgc
tttccagctgctccagctgcagctgaaaggggccaacatagagctggggccgtggcttca
gagggtgcaagcctccagccttggcagcttccacgtggtgttgagccttctagtacacag
aagtcaagaattgaggtttgggaatctttgcctagatttcagatgatgtatggaaatgcc
tggatgtccaggcagaagttttctgcaggggtagtgccctcacggagaacctctgctagg
gtggtgcgaaagggaaatgtggggtcagagcccccagacagagttcctactgaggtactg
cctagtggagctgtgagaagagggccactgtcctccagatcacagaatggtggatccact
gacagcttgcaccgtgcacctggaaaagctgcagacactcaacatggctttcccatgaaa
gcagccagagggaggctgtaccctgcaaagccacaggggcagagctgcccaagaccatgg
gaaccaacctcttgcatcagcatgacttag

>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_4|210_aa
MATEPPTRPTIVYKGTPPIPTRTWYIDGSSKGTQHQWYIIRAATGWATAKAAGISILYAD
ILAAVQNYGTYLKVIKAIYDTPTGNTIPNKENLKAFPQRTRTRQEYPLSPLLLNIVLEIL
ARAVRQKKEIKGIQIGKEEVKLLLFADDMIMYLENPKDSSKNLDLINEFSKVSGYKINVH
KSVALLYTNNDKAENQIKYSIPFTTAAKKN

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_4|633_bp
atggcaacggaaccacctaccaggccaaccattgtatataaggggaccccaccaataccc
actaggacctggtacattgatgggtctagcaaaggcacccaacaccaatggtacatcata
agagcagccacagggtgggccacagcaaaggcagcaggcatctccatcctctatgcagat
attctagcagctgttcagaactatgggacatacctcaaagtaataaaagccatctatgac
acaccaacaggcaacacaataccaaacaaggaaaatttgaaagcattcccccagagaact
agaacaagacaagaatacccactttcaccacttctactcaacatagtactggaaatccta
gccagagcagtcagacaaaagaaagaaataaagggtattcaaattggaaaagaggaagtc
aaactgttgctgttcgccgatgatatgatcatgtacctagaaaaccctaaagactcatcc
aaaaatctagacctgataaatgagttcagtaaagtttcgggatacaaaatcaatgtacac
aaatcagtagcactgctatataccaacaatgacaaagctgagaatcaaatcaagtactca
atcccttttacaacagctgcaaaaaaaaattaa

>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_5|109_aa
MGFHRVTQAGLELLTSEAESGGPEDPVQAAEVLICYSPQLFLSLRFLAMVVQELVAVRRC
HCARCLLRGRRLLAVGGSVPALGAVRSDSEDVAVALVGRSGEEKGGESR

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_5|330_bp
atggggtttcaccgtgttacccaggctggtctcgaactcctgacctcagaagcagaaagt
ggagggccagaagaccccgtgcaggctgcagaagttctcatttgctactcaccccaactg
tttctgtccctgcggttcttggccatggtggtccaggagctggtggcggtgaggcgctgt
cactgcgctcgctgccttctccggggccgcaggttgctggcggtgggaggctccgtgccc
gcgctgggcgcagttcgctcagactctgaggatgttgctgtggcgctggtgggaaggagt
ggggaggaaaagggaggagaaagcagatga

>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_6|641_aa
MTVKNHLTKKTPGSQSFTGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETAL
NRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWR
GGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSI
QLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEEL
QNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESL
DIKEINGNKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKK
MEEEAKISTRMWKKLIPTLLDDFERGPRLQWRKEVHVWCKQQENLKVEPEDVTQFCILLT
DKELLPMDKQRQWFLEMESTPSEDAVNSVEMTTKGLEYFLLICGGDKPFLAPNDLQTKHL
QLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLF
VVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAA
ALWDQALYKLYSAAATHRHLYHQAFPTPKSESTEQSEKKKM

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_6|1926_bp
atgacagttaaaaatcatctcacaaagaaaacaccaggttcacaaagttttacaggtgga
ttttcggaaaagacatatgaatggagctcagaagaggaggagccagtgaaaaaggcagga
ccagtccaagtcctcattgtcaaagatgaccattcctttgagttagatgaaactgcatta
aatcggatccttctctcggaggctgtcagagacaaggaggttgttgctgtatctgttgct
ggagcatttagaaaaggaaaatcattcctgatggacttcatgttgagatacatgtacaac
caggaatcagttgattgggttggagactacaatgaaccattgactggtttttcatggaga
ggtggatctgagcgagagaccacaggaattcagatatggagtgaaatcttccttatcaat
aaacctgatggtaaaaaggttgcagtgttattgatggatactcagggaacctttgatagt
cagtcaactttgagagattcagccacagtatttgcccttagcacaatgatcagctcaata
cagcttttcactgagtatggcagactggcaatggaggaaacattcctgaagccatttcag
agtctgatatttcttgttcgagactggagtttcccatacgaattttcatatggagccgat
ggtggtgccaaattcttggaaaaacgcctcaaggtctcagggaaccagcatgaagaacta
cagaacgtcagaaaacacatccattcctgtttcaccaacatttcctgttttctgctacct
catcctggcttaaaagtagctaccaatccaaactttgatggaaaattgaaagaaatagat
gatgaattcatcaaaaacttgaaaatactgattccttggctacttagtcccgagagccta
gatattaaagagatcaatgggaataaaatcacctgccggggtctggtggagtacttcaag
gcttatataaagatctatcaaggtgaagaattaccacatcccaaatccatgttacaggcc
acagcagaagctaacaatttagcagccgtggcaactgccaaggacacatacaacaaaaaa
atggaagaggaggcaaaaatatcaacaagaatgtggaaaaagttgataccaacccttctg
gatgactttgagaggggtccaagacttcagtggaggaaggaagtgcatgtgtggtgcaaa
cagcaagagaacttaaaagtggagcctgaagatgtgactcaattttgtattctcttaacg
gataaggagttgcttcctatggataagcaaagacagtggtttctggagatggaatctact
cctagcgaagatgctgtgaacagtgttgaaatgacaacaaagggtttagaatatttttta
ttgatttgtggtggtgacaaaccatttctggccccaaatgacttgcagaccaaacacctg
caacttaaggaagaatctgtgaagctattccgaggggtgaagaagatgggtggggaagaa
tttagccggcgttacctgcagcagttggagagtgaaatagatgaactttacatccaatat
atcaagcacaatgatagcaaaaatatcttccatgcagctcgtaccccagccacactgttt
gtagtcatctttatcacatatgtgattgctggtgtgactggattcattggtttggacatc
atagctagcctatgcaatatgataatgggactgacccttatcaccctgtgcacttgggca
tatatccggtactctggagaataccgagagctgggagctgtaatagaccaggtggctgca
gctctgtgggaccaggctttgtacaagctttacagtgcagcagcaacccacagacatctg
tatcatcaagctttccctacaccaaagtcggaatctactgaacaatcagaaaagaaaaaa
atgtaa

>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_7|432_aa
MDLQYIWQQTLQWKHYRPGECGMTSKVLKEKNFYPGILYPMKTSFKHEEKKTFTDKQKPR
DFINTRTALQEMLKGVLLPENLMPSFIRHGPTIPRRTDICLPDSSPNAFSTSGDVVSRNQ
SFLRTPIQRTPHEIMRRESNRLSAPSYLARSLADVPREYGSSQSFVTEVSFAVENGDSGS
RYYYSDNFFDGQRKRPLGDRAHEDYRYYEYNHDLFQRMPQNQGRHASGIGRVAATSLGNL
TNHGSEDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLEREGLPPGWERVESSEFGTY
YVDHTNKKAQYRHPCAPSVPRYDQPPPVTYQPQQTERNQSLLVPANPYHTAEIPDWLQVY
ARAPVKYDHILKWELFQLADLDTYQGMLKLLFMKELEQIVKMYEAYRQALLTELENRKQR
QQWYAQQHGKNF

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_7|1299_bp
atggatctccagtacatctggcagcagactcttcagtggaaacattacaggccaggagag
tgtggcatgacatctaaagtgctgaaagagaaaaacttttaccctggaatactatatcca
atgaaaacatctttcaaacatgaagaaaaaaagactttcacagataaacaaaagccgagg
gatttcatcaacaccagaactgccctacaagaaatgctaaagggagtacttctaccagaa
aatcttatgccttcattcatccggcatggtccaacaattccaagacgaactgatatctgt
cttccagattcaagccctaatgccttttcaacttctggagatgtagtttcaagaaaccag
agtttccttagaactccaattcaaagaacacctcatgaaataatgagaagagaaagcaac
agattatctgcaccttcttatcttgccagaagtctagcagatgtccctagagagtatggt
tcttctcagtcatttgtaacggaagttagttttgctgttgaaaatggagactctggttcc
cgatattattattcagacaatttttttgatggtcagagaaagcggccacttggagatcgt
gcacatgaagactacagatattatgaatacaaccatgatctcttccaaagaatgccacag
aatcaggggaggcatgcttcaggtattgggagagttgctgctacatctttaggaaatttg
actaaccatggttctgaagatttaccccttcctcctggctggtctgtggactggacaatg
agagggagaaaatattatatagatcataacacaaatacaactcactggagccatcctctt
gagcgagaaggacttcctcctggatgggaacgagttgagtcatccgaatttggaacctat
tatgtagatcacacaaataagaaggcccaatacaggcatccctgtgctcctagtgtacct
cggtatgatcaaccacctcctgtcacataccagccacagcaaactgaaagaaatcagtcc
cttctggtacctgcaaatccatatcatactgcagaaattcctgactggcttcaggtttac
gcacgagcccctgtgaaatatgaccacattctgaagtgggaactcttccagctggctgac
ctggatacataccagggaatgctaaagttgctcttcatgaaagaattggagcagattgtt
aaaatgtatgaagcatacagacaagcccttcttacagagttggaaaaccgaaagcagaga
cagcagtggtatgcccaacaacatggaaaaaatttttga

>gi568815584f:50487830_50732327|GENSCAN_predicted_peptide_8|422_aa
MQHLRSTATPSPSPHAWDLQLLQQQACPMVPREQFLQLQRQLLQAERINQHLQEELENRT
SETNTPQGNQEQLVTVMEERMIEVEQKLKLVKRLLQEKVNQLKEQLCKNTKADAMVKDLY
VENAQLLKALEVTEQRQKTAEKKNYLLEEKIASLSNIVRNLTPAPLTSTPPLSHFRQQLV
EDLLGAGHFPSSSQQPACFHETIIRKVRFDIFLEGQAHLFTKGKSSPRSGPSSEGPKDGK
ERVVQLQNWIMIFQKQPASPLKAVTESRRPLSSLFPQSQGKKQPPLERGHSTVATQNPQR
VTNRSSVSSVTSASAEGQPDHAHVMPHECYLCDYAAVDSRSLKKHLRIHSDEQPYKCQLC
PYVSRNSSQLTVHLRSHTGDISFQCWLCSAKFKISSDLKRHMIVHWGRSLSSASSAATSA
AP

>gi568815584f:50487830_50732327|GENSCAN_predicted_CDS_8|1269_bp
atgcagcacctgaggtccactgcgacgcctagcccgtcccctcatgcttgggatttgcag
ctgctccagcagcaagcctgtccgatggtgcccagggagcagtttctgcagcttcaacgc
cagctgctgcaggcagaaaggataaaccagcacctgcaggaggaacttgaaaacaggacc
tccgaaaccaacacaccacagggaaaccaggaacaactggtaactgtcatggaggaacga
atgatagaagttgaacagaaactgaaactagtgaaaaggcttcttcaagagaaagtgaat
cagctcaaagaacaactctgcaagaacactaaggcagacgcaatggtgaaggacttgtat
gttgaaaatgcccagttgttgaaagctctggaagtgactgaacagcgacagaaaacagca
gagaagaaaaattacctcctggaggagaagattgccagcctcagtaatatagttaggaat
ctgacaccagcgccattgacttctacacctcctttgagccacttccgccagcagttggtg
gaagacttactaggtgcagggcactttccaagttcatcacaacaacctgcttgttttcat
gagacaataatccgaaaagttcgctttgatatattcctggagggccaagcccatctattt
acaaaagggaaatcctcaccaaggagcggaccttcgagtgaaggcccgaaggatgggaag
gagcgagttgtgcagcttcagaactggataatgatattccaaaagcaacctgcctctcca
ctgaaagcagtgactgaaagcagaaggcccctgtcatcactcttccctcagagtcaaggg
aagaaacagccgcccttggagagaggacattcgactgttgctacccagaatccacaacgg
gtgacgaaccgctcaagtgtgagttctgtgacaagtgcttcagcggaaggacaacctgac
catgcacatgtgatgccgcacgagtgttacctgtgtgactatgctgccgtggacagcagg
agcctcaagaagcacctacggatccactcggacgagcagccatacaaatgccagctctgc
ccctatgtcagccgcaactccagccagctcaccgtccacctgcgatcccacactggggat
atctccttccagtgctggctctgtagcgccaagttcaaaatcagctcagacttgaaaagg
cacatgatcgtgcactgggggagaagcctttcgagtgcgagttctgcagcgacgtccgct
gcaccatga