GENSCAN 1.0	Date run:  4-Nov-116	Time: 06:28:05

Sequence gi568815583r:68680084_68920751 : 240668 bp : 44.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3648   3719   72  0  0  118   -2    79 0.079   0.42
 1.02 Intr +   6927   7027  101  0  2   71   89    34 0.164   1.55
 1.03 Intr +  14295  14497  203  1  2   46   49    87 0.569  -0.40
 1.04 Intr +  15057  15173  117  2  0  133   97   204 0.959  26.46
 1.05 Intr +  16544  16568   25  1  1   87   75     8 0.239  -3.00
 1.06 Intr +  20026  20126  101  2  2   67   78    77 0.393   4.43
 1.07 Intr +  30649  30798  150  0  0  120   91   319 0.999  35.76
 1.08 Intr +  31459  31623  165  0  0  128   44   284 0.997  28.16
 1.09 Intr +  33842  33958  117  1  0  133   76    97 0.906  13.66
 1.10 Intr +  34476  34580  105  2  0   50   62   132 0.976   7.21
 1.11 Intr +  35132  35228   97  1  1   90   97   218 0.999  22.48
 1.12 Intr +  38615  38727  113  0  2   60  110   259 0.533  25.40
 1.13 Intr +  39061  39151   91  0  1   82   66    80 0.997   4.77
 1.14 Intr +  39330  39469  140  1  2   60   94   134 0.652  11.38
 1.15 Term +  45760  45891  132  0  0  117   36   356 0.975  31.39
 1.16 PlyA +  46069  46074    6                               1.05

 2.03 PlyA -  47272  47267    6                               1.05
 2.02 Term -  75032  74897  136  1  1  136   36   112 0.726   8.29
 2.01 Init -  88375  88314   62  1  2   78   73    34 0.067   1.62
 2.00 Prom -  93458  93419   40                               0.14

 3.12 PlyA -  97680  97675    6                               1.05
 3.11 Term - 100059  99998   62  1  2  112   42   114 0.998   7.17
 3.10 Intr - 100390 100300   91  1  1  106   29   157 0.581  11.17
 3.09 Intr - 102970 102873   98  2  2   38   94   293 0.978  24.63
 3.08 Intr - 104512 104314  199  1  1   91   64   428 0.999  39.62
 3.07 Intr - 107452 107330  123  1  0   73  119    35 0.983   5.88
 3.06 Intr - 107836 107687  150  1  0  105   94   138 0.927  16.46
 3.05 Intr - 113559 113330  230  1  2   63   71    83 0.161   1.69
 3.04 Intr - 116528 116471   58  2  1   76   97    11 0.063  -0.74
 3.03 Intr - 125847 125779   69  0  0   95   60    44 0.073   1.68
 3.02 Intr - 139630 139480  151  0  1   72   52    58 0.016   0.76
 3.01 Init - 140976 140816  161  0  2   46   92   189 0.350  12.40
 3.00 Prom - 143113 143074   40                              -3.16

 4.00 Prom + 146752 146791   40                              -6.96
 4.01 Init + 147367 147382   16  0  1   99   71    24 0.476   0.84
 4.02 Term + 154095 154666  572  1  2   36   49   415 0.651  27.00
 4.03 PlyA + 155279 155284    6                               1.05

 5.00 Prom + 159213 159252   40                              -4.26
 5.01 Init + 170838 170848   11  2  2  114   67    -6 0.043  -0.26
 5.02 Intr + 172563 172691  129  0  0   59   94    64 0.039   3.91
 5.03 Intr + 197072 197094   23  2  2   75   80    40 0.003  -0.91
 5.04 Intr + 216560 216736  177  0  0   79   82    67 0.105   5.09
 5.05 Term + 223688 223872  185  0  2   35   46   139 0.210   2.11
 5.06 PlyA + 225333 225338    6                               1.05

 6.00 Prom + 234140 234179   40                              -5.96
 6.01 Init + 236408 236902  495  1  0   94   41   211 0.772  12.11
 6.02 Term + 237609 238592  984  2  0   49   34   295 0.830  12.27
 6.03 PlyA + 240198 240203    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:68680084_68920751|GENSCAN_predicted_peptide_1|576_aa
XACSTSRQESVALVKTTVIMVLTACCSGIAISHLSHVDSIWIPVFCAGTLEAWHSVVAER
GNRGSEKFINFPKATTFTAKNQQSCNSNTGLWDSEDYAFNHRALCTGVQDVHCRRTLIHI
VERMARTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSTLPTFTSGAPEASAT
EALPPPIPAGMVNLLLTRHDIQTQAWEVRIWEIPEGGLKRNMTEALLELHGHSRRVGLVE
WHPTTNNILFSAGYDYKVLIWNLDVGEPVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKL
RVIEPRSGRVLQEANCKNHRVNRVVFLGNMKRLLTTGVSRWNTRQIALWDQEDLSMPLIE
EEIDGLSGLLFPFYDADTHMLYLAGKGDGNIRYYEISTEKPYLSYLMEFRSPAPQKGLGV
MPKHGLDVSACEVFRFYKLVTLKGLIEPISMIVPRRSDSYQEDIYPMTPGTEPALTPDEW
LGGINRDPVLMSLKEGYKKSSKMVFKAPIKEKKSVVVNGIDLLENVPPRTENELLRMFFR
QQDEIRRLKEELAQKDIRIRQLQLELKNLRNSPKNC

>gi568815583r:68680084_68920751|GENSCAN_predicted_CDS_1|1731_bp
nnagcatgttctacctctcggcaagagagtgtggccttggtcaagaccactgtcatcatg
gtgctcacagcctgttgttctggcattgccatctcacatctttctcatgtggactcaata
tggattcctgtgttctgtgctggtacactggaagcatggcactctgtggttgcagagagg
ggaaaccgaggctcagagaagttcattaactttcctaaggccacaactttcactgctaaa
aatcagcagagctgtaattcaaacacaggcctgtgggactccgaagactatgctttcaac
cacagggcactgtgtaccggtgttcaagatgtacactgcagaaggacgctcattcatatc
gtagagagaatggctcgtacaggcaggattgaacccaactaccccaaggtctgcggccac
cagggcaatgtgctggatatcaaatggaaccccttcatcgacaacatcattgcctcgtgc
tcggaggacacgtcgactctaccaactttcaccagtggagcacctgaggcatcggccacc
gaggccctccctccacccattccagctggaatggtcaacttgctgctcaccagacacgac
atccagacccaggcttgggaggtgcggatctgggagatccccgagggcgggctgaagcgg
aacatgacggaggcgctcctggagctgcacgggcacagccggcgtgtggggctggtcgag
tggcaccccaccaccaacaacatcctgttcagcgctggctacgactacaaggtcctcatc
tggaacctggatgtgggtgagccggtgaagatgattgactgccacacggatgtgatcctc
tgcatgtccttcaacacggacggcagcctgctcaccaccacgtgcaaggacaagaagctg
cgtgtgattgagccccgctctggccgtgttctgcaggaggccaactgcaaaaaccacaga
gtgaaccgggtggtgttcctggggaacatgaagcggctcctcacgacaggggtctccagg
tggaacacaagacagattgccctctgggaccaggaggacctctccatgcccctgatcgaa
gaggaaattgatgggctctctggcctcctgttccccttctatgatgctgacacccacatg
ctctacctggctggaaagggtgatggaaacatccggtactacgagatcagcactgagaag
ccctacctgagttacctcatggagttccgctccccagccccgcagaaaggcctaggggtc
atgcccaagcacgggctggatgtgtcagcctgcgaggtgttccgcttctacaagctggtg
actctcaagggcctgatcgagcccatctccatgatcgtgccccggaggtcagattcctac
caggaagacatttacccaatgacaccaggcacggagccagcactgaccccggatgaatgg
ctgggaggcatcaaccgagatcccgtgctgatgtctttgaaagaaggctataagaagtcc
tcaaaaatggtatttaaggctcccatcaaagaaaagaagagtgttgtggtcaacggaata
gatttattagaaaatgtcccacccaggacagagaatgagctccttcgaatgttcttccgg
cagcaggatgagattcgacggttgaaagaggagctggcccagaaggacatccgcattcgg
cagctccagctggaactgaaaaacttgcgcaacagccccaagaactgttag

>gi568815583r:68680084_68920751|GENSCAN_predicted_peptide_2|65_aa
MSYHSSTKAVKIKETDNTKSCPGILLQSSATPLLRKLPVQVLIKDVCLPCYKQERKHYFL
DCVFT

>gi568815583r:68680084_68920751|GENSCAN_predicted_CDS_2|198_bp
atgagttatcactcatccactaaagcagtgaaaattaaggagactgacaacaccaaaagt
tgccctggcatactgctgcaaagctccgcaacgcctttgctcaggaagctccccgtgcag
gttctcatcaaggatgtctgcctcccctgctacaaacaggaacgaaaacactacttcctg
gattgcgtctttacataa

>gi568815583r:68680084_68920751|GENSCAN_predicted_peptide_3|463_aa
MAEPPWPAAQPAHWSLPPPAATAIGCCPETLGGDWLGPLPLVHGAADPASTAIRCQPLGP
GAPQLEPPARLSQCWACRQPFGACLINGHGKLCQDASCPELAPVELDRHITYAALVGLLF
RWGRQSVCLPLQSSSTYLFSLPASTEEAFEECTLARPQSCYLAHWTGVVYWWLSPPSRPP
HLLLARTPTLAYCFFRVSSANSVAGVPHVERAGDLHAEHWVIQVKELVLDNSRSNEGKLE
GLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL
SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYDRDDKEA
PDSDAEGYVEGLDDEEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDEEGYN
DGEVDDEEDEEELGGMAAFLLSAEEERGQKRKREPEDEGEDDD

>gi568815583r:68680084_68920751|GENSCAN_predicted_CDS_3|1392_bp
atggccgagcctccctggccggctgcgcagcccgcccattggtcccttcccccccccgcc
gccactgccattggctgttgcccggagaccctcggcggcgattggctcgggccgctgccg
ctcgtccatggggccgcagatcccgcctccacggcgatcagatgccagcctttgggccct
ggtgccccccagctcgaacccccggcccgtctttctcagtgctgggcttgtcggcagcca
ttcggcgcctgcttaataaatgggcacgggaaactttgtcaggacgcgagctgcccggag
ctggcgcccgtggaactagacagacacatcacctatgctgctcttgtggggcttctgttc
cgctgggggagacagtcagtatgcctacctcttcagtcctccagcacctacctcttcagt
cttccagcatccactgaagaggcatttgaagaatgcaccctggcccggccccagtcctgc
tacctggcacactggactggagttgtttactggtggctgtctcctcccagccggccacca
cacctcttgctggcaaggaccccgaccttggcttactgtttcttccgtgtctcctcagcc
aacagtgtcgcaggtgtgccccatgtggagagggctggagacctgcatgcagagcactgg
gtcattcaggtgaaagaacttgtcctggacaacagtcggtcgaatgaaggcaaactcgaa
ggcctcacagatgaatttgaagaactggaattcttaagtacaatcaacgtaggcctcacc
tcaatcgcaaacttaccaaagttaaacaaacttaagaagcttgaactaagcgataacaga
gtctcagggggcctggaagtattggcagaaaagtgtccgaacctcacgcatctaaattta
agtggcaacaaaattaaagacctcagcacaatagagccactgaaaaagttagaaaacctc
aagagcttagaccttttcaattgcgaggtaaccaacctgaacgactaccgagaaaatgtg
ttcaagctcctcccgcaactcacatatctcgacggctatgaccgggacgacaaggaggcc
cctgactcggatgctgagggctacgtggagggcctggatgatgaggaggaggatgaggat
gaggaggagtatgatgaagatgctcaggtagtggaagacgaggaggacgaggatgaggag
gaggaaggtgaagaggaggacgtgagtggagaggaggaggaggatgaagaaggttataac
gatggagaggtagatgacgaggaagatgaagaagagcttggtggtatggcagccttttta
ctctcagctgaagaagaaaggggtcagaagcgaaaacgagaacctgaagatgagggagaa
gatgatgactaa

>gi568815583r:68680084_68920751|GENSCAN_predicted_peptide_4|195_aa
MVPALVKELPWEPLSPEEVQSVQEHLGHESDSLLFVQITSKKKKTKNNFEVSSSSQLKLS
ITKKSSPSVKPAGYPAAAKLWTLSANDMEDDSMDLIDSEELLDPEDLKKPDPTSLQAAPC
GEGKKRKTCQSCTRGLAEELEKEKSREQMSSQPKSACGNCYLGNSFHCASCPYLGIPAFK
PGEKVLLSNSSLYHA

>gi568815583r:68680084_68920751|GENSCAN_predicted_CDS_4|588_bp
atggtccctgccctagtgaaagagctgccatgggagcccttaagccctgaggaggtacag
tctgttcaagaacacctgggtcatgaaagtgacagcctgctctttgttcagatcacaagc
aaaaaaaaaaaaacaaaaaacaactttgaagtgagttcttctagtcagcttaagctttcc
atcaccaagaagtcatctccttcagtgaagcctgctgggtaccctgctgctgccaagctg
tggaccctctcagccaatgatatggaggatgacagcatggatctcattgactcagaggag
ctgctggatccagaagatttgaagaagccagatccgacttccctgcaggctgctccttgt
ggggaagggaaaaagaggaagacctgccagagctgcacccgtggccttgccgaagaactg
gaaaaagagaagtcaagggagcagatgagctcccaacccaagtcagcttgtggaaactgc
tatctgggcaatagtttccactgtgccagctgcccctaccttgggataccagccttcaaa
cctggggaaaaggtgcttctgagcaatagcagtctttaccatgcctag

>gi568815583r:68680084_68920751|GENSCAN_predicted_peptide_5|174_aa
MPCLVRRVSMRGRFGVSELEQHEDSCPAQGGKVSMQQGEGESQTRARQVAHEVGGPIVSW
ASNSQRPLNLEFGPYIHPKEVLSVITEINQQGQKKEMCNLQLQRWIPLVEGTAVFCKEVF
GDYCNILFPIKLPPSFSTDRQFSLQLGIPMMVANAGFLFPFYVYSMAFYCKEEL

>gi568815583r:68680084_68920751|GENSCAN_predicted_CDS_5|525_bp
atgccctgccttgtgaggagagtgtccatgcgggggcggtttggcgtgtcagagctggaa
caacatgaagacagctgcccagcacagggtgggaaggtgtccatgcagcaaggggagggt
gagagccagaccagagccaggcaagtggcccacgaagttggagggcctattgtgtcctgg
gcttcaaattcacagaggcccttaaatttagaatttggaccttacatccatcccaaagag
gttctatctgtgatcacagagataaaccaacaaggacagaagaaagagatgtgcaactta
cagcttcagcgttggatcccattagtggaaggcactgctgtattttgtaaagaggtgttc
ggagattattgcaatatcttgttccccatcaaacttccacccagctttagcactgatcga
caattctcacttcaactgggcatccccatgatggttgccaatgctggttttctatttcca
ttctacgtgtattcgatggcattctactgtaaagaagagctttga

>gi568815583r:68680084_68920751|GENSCAN_predicted_peptide_6|492_aa
MPLKNCAISLVIWKMQIKISMKLHTRKWRHKKPFKKINESRSWFFEKINKIDRPLARLIK
KREKNQIDAIKNDKGDITTNPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQ
EEAESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFHQRYKEELISNFSKVSGYKINVQ
KSQTFLYTNNRQTESQIMSELPFSIASKRIKYLGIHLTRDVKDLFKENYKPLLNEIKEDT
NKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARI
AKSILSQKNKAGGITLLDFKLYYKATVTKRACYWYQNRDIDQWNKTEPSEIMPHIYNYLI
FDKPDKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKT
LEENLGNTIQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEW
EKIFAPTHLTKG

>gi568815583r:68680084_68920751|GENSCAN_predicted_CDS_6|1479_bp
atgcccctgaaaaactgtgcaatatcattagtcatttggaaaatgcaaatcaaaatctca
atgaaacttcacacccggaaatggagacacaaaaagcccttcaaaaaaatcaatgaatcc
aggagctggttttttgaaaagatcaacaaaattgatagaccactagcaagactaataaag
aaaagagagaagaatcaaatagacgcaataaaaaatgacaaaggggatatcaccaccaat
cccacagaaatacaaactaccatcagagaatactataaacacctctacgcaaataaacta
gaaaatctagaagaaatggataaattcctcgacacatacactctcccaagactaaaccag
gaagaagctgaatctctgaatagaccaataacaggctctgaaattgaggcaataattaat
agcttaccaaccaaaaaaagtccaggaccagatggattcacagccgaattccaccagagg
tacaaggaggagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaa
aaatcacaaacattcttatacaccaataacagacaaacagagagccaaatcatgagtgaa
ctcccattctcaattgcttcaaagagaataaaatacctaggaatccaccttacaagggat
gtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggacaca
aacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaatggcc
atactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttc
ttcacagaattggaaaaaactactttaaaattcatatggaaccaaaaaagagcccgcatt
gccaagtcaatcctaagccaaaagaacaaagcaggaggcatcacgctacttgacttcaaa
ctatactacaaggctacagtaaccaaaagagcatgctactggtaccaaaacagagatata
gaccaatggaacaaaacagagccctcagaaataatgccacatatctacaactatctgatc
tttgacaaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgc
tgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacaccttat
acaaaaattaattcaagatggattaaagacttaaatgttagacctaaaaccataaaaacc
ctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtct
aaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaacta
aagagcttctgcacagcaaaagaaaccaccatcagagtgaacaggcaacctacagaatgg
gagaaaatttttgcacctactcatctgacaaagggctaa