GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:45:26

Sequence gi568815583r:59564072_59782457 : 218386 bp : 41.00% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    180    175    6                               1.05
 1.02 Term -   5271   5116  156  0  0   64   42   104 0.378   0.35
 1.01 Init -  11306  11187  120  2  0   21  110    71 0.273   2.84
 1.00 Prom -  15696  15657   40                              -3.65

 2.00 Prom +  27797  27836   40                              -4.35
 2.01 Init +  32042  32178  137  1  2   76   79    93 0.915   6.86
 2.02 Intr +  32247  32283   37  0  1   85   85    50 0.616   1.75
 2.03 Term +  32328  32381   54  2  0  113   49    15 0.482  -3.32
 2.04 PlyA +  34753  34758    6                               1.05

 3.00 Prom +  35239  35278   40                              -2.95
 3.01 Init +  45830  45882   53  1  2   92   42   103 0.591   6.78
 3.02 Intr +  49917  50034  118  0  1   43  100    50 0.359   1.25
 3.03 Term +  50146  50328  183  0  0   44   48   142 0.376   2.36
 3.04 PlyA +  50863  50868    6                               1.05

 4.00 Prom +  53175  53214   40                              -6.95
 4.01 Sngl +  54168  55484 1317  2  0   80   53  1017 0.999  91.21
 4.02 PlyA +  55916  55921    6                               1.05

 5.03 PlyA -  57941  57936    6                               1.05
 5.02 Term -  64162  64077   86  2  2   55   41   115 0.421   0.34
 5.01 Init -  69107  69029   79  2  1   56  100    72 0.343   6.47
 5.00 Prom -  71170  71131   40                              -5.65

 6.10 PlyA -  71210  71205    6                               1.05
 6.09 Term -  71437  71307  131  2  2   14   41   153 0.439   0.56
 6.08 Intr -  78171  78065  107  2  2   19  106    70 0.048   0.84
 6.07 Intr -  93245  93022  224  2  2  -20   76   259 0.209   9.90
 6.06 Intr -  96966  96894   73  2  1   66   95    73 0.973   4.29
 6.05 Intr - 100049 100002   48  1  0   59   98    88 0.756   3.78
 6.04 Intr - 108668 108566  103  0  1  107   97    58 0.970   6.91
 6.03 Intr - 114016 113840  177  2  0   63   78   166 0.996  12.07
 6.02 Intr - 115697 115521  177  0  0   87   94   161 0.998  15.57
 6.01 Init - 116254 116170   85  1  1   36   99   123 0.567   9.23
 6.00 Prom - 116886 116847   40                              -6.55

 7.00 Prom + 118312 118351   40                              -8.25
 7.01 Init + 119918 120045  128  1  2   68   92    52 0.188   3.28
 7.02 Intr + 124750 124940  191  1  2   32   55   132 0.231   2.61
 7.03 Intr + 125006 125247  242  0  2   31   42   321 0.387  18.15
 7.04 Intr + 137786 137830   45  1  0   99   87    34 0.427   2.09
 7.05 Intr + 142046 142235  190  1  1   54   53   155 0.639   6.84
 7.06 Term + 146105 146172   68  0  2  101   44    47 0.601  -1.28
 7.07 PlyA + 146777 146782    6                               1.05

 8.00 Prom + 151290 151329   40                              -7.65
 8.01 Init + 152659 152718   60  0  0   47  100    39 0.419   1.88
 8.02 Intr + 158584 158733  150  0  0  104   80    81 0.628   8.34
 8.03 Intr + 161358 161458  101  2  2   40   80    67 0.493  -0.91
 8.04 Term + 164380 164686  307  1  1   90   39   125 0.495   1.40
 8.05 PlyA + 164793 164798    6                               1.05

 9.00 Prom + 165485 165524   40                              -1.55
 9.01 Init + 167639 167686   48  1  0   61   82    50 0.530   2.93
 9.02 Term + 171999 172106  108  2  0  109   54    48 0.522   1.03
 9.03 PlyA + 173542 173547    6                               1.05

10.04 PlyA - 175638 175633    6                               1.05
10.03 Term - 178000 177827  174  1  0   57   40    75 0.083  -3.62
10.02 Intr - 182954 182711  244  1  1   74  103   197 0.974  16.38
10.01 Init - 193929 193739  191  0  2   46   98   109 0.964   6.23
10.00 Prom - 196832 196793   40                              -6.95

11.00 Prom + 202609 202648   40                              -6.45
11.01 Sngl + 204281 205075  795  1  0  105   39  1030 0.998  95.42
11.02 PlyA + 205099 205104    6                               1.05

12.03 PlyA - 205364 205359    6                               1.05
12.02 Term - 214930 214876   55  0  1  124   43    61 0.378   1.25
12.01 Intr - 217424 217193  232  0  1   46   72   150 0.194   5.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_1|91_aa
MVHRVSEAQRPRKESLDPVEGPAKEARKSHLNACPISKDRVFLKLQDFSGGIMLPTQRAF
RAHFLSRSNRHELYRRALKYLQLSDKEWASP

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_1|276_bp
atggtccacagagtttctgaagcacaaaggccgagaaaggaatccctggacccagttgag
ggtccagcaaaagaggcaaggaagagccatttaaatgcgtgccccatttccaaagacagg
gttttcctcaagttacaggatttcagtggtggcattatgctccctacccaaagggccttc
agggcccattttctgagtcgaagtaacagacatgaactctacagaagagctttgaagtac
ttgcaactgtccgataaagaatgggcttccccctaa

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_2|75_aa
MGSSPQPGQTPAAVPEPPGQGYRRKHCSKTKLISDELELYYMTAGRERREEAHDWLLQKG
RLSAQAQHKVSVIHA

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_2|228_bp
atgggctctagtccacaaccaggccagactccagctgctgttccagagccccctgggcag
ggctatcgcaggaaacactgctcaaagacaaagctcatctctgatgagctggaattatat
tatatgacagccggaagggagagaagagaagaggcccatgactggctcctacagaaaggt
agactgtctgcccaggcccagcacaaggtgtcagtgatccatgcctga

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_3|117_aa
MAVAALCFRGAEQQQGQLLGDSETLSLKNTYTNKSPQLFKVLSLTEGIYNAVFMGMKRFY
TQQWKVTENPSTAENSLWSRAHVGVQMTLLPERGPDPDPNRGFLDLAQERIQGESVK

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_3|354_bp
atggccgtggctgccctttgcttccgtggtgctgagcagcagcaggggcagctcctgggt
gacagcgagaccctgtctctgaaaaacacatacacaaacaaaagccctcaactattcaag
gtgttgtctcttactgagggaatctataatgcagtttttatgggaatgaagagattttat
actcaacaatggaaagtcactgagaatcccagtaccgcagaaaacagcctgtggagcagg
gcccacgtaggggtgcagatgaccctgttaccagaaaggggtcccgatccagaccccaac
agagggttcttggatcttgcgcaagaaagaattcagggcgagtccgtaaagtga

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_4|438_aa
MVQWKRLCQLHYLWALGCYMLLATVALKLSFRLKCDSDHLGLESRESQSQYCRNILYNFL
KLPAKRSINCSGVTRGDQEAVLQAILNNLEVKKKREPFTDTHYLSLTRDCEHFKAERKFI
QFPLSKEEVEFPIAYSMVIHEKIENFERLLRAVYAPQNIYCVHVDEKSPETFKEAVKAII
SCFPNVFIASKLVRVVYASWSRVQADLNCMEDLLQSSVPWKYFLNTCGTDFPIKSNAEMV
QALKMLNGRNSMESEVPPKHKETRWKYHFEVVRDTLHLTNKKKDPPPYNLTMFTGNAYIV
ASRDFVQHVLKNPKSQQLIEWVKDTYSPDEHLWATLQRARWMPGSVPNHPKYDISDMTSI
ARLVKWQGHEGDIDKGAPYAPCSGIHQRAICVYGAGDLNWMLQNHHLLANKFDPKVDDNA
LQCLEEYLRYKAIYGTEL

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_4|1317_bp
atggttcaatggaagagactctgccagctgcattacttgtgggctctgggctgctatatg
ctgctggccactgtggctctgaaactttctttcaggttgaagtgtgactctgaccacttg
ggtctggagtccagggaatctcaaagccagtactgtaggaatatcttgtataatttcctg
aaacttccagcaaagaggtctatcaactgttcaggggtcacccgaggggaccaagaggca
gtgcttcaggctattctgaataacctggaggtcaagaagaagcgagagcctttcacagac
acccactacctctccctcaccagagactgtgagcacttcaaggctgaaaggaagttcata
cagttcccactgagcaaagaagaggtggagttccctattgcatactctatggtgattcat
gagaagattgaaaactttgaaaggctactgcgagctgtgtatgcccctcagaacatatac
tgtgtccatgtggatgagaagtccccagaaactttcaaagaggcggtcaaagcaattatt
tcttgcttcccaaatgtcttcatagccagtaagctggttcgggtggtttatgcctcctgg
tccagggtgcaagctgacctcaactgcatggaagacttgctccagagctcagtgccgtgg
aaatacttcctgaatacatgtgggacggactttcctataaagagcaatgcagagatggtc
caggctctcaagatgttgaatgggaggaatagcatggagtcagaggtacctcctaagcac
aaagaaacccgctggaaatatcactttgaggtagtgagagacacattacacctaaccaac
aagaagaaggatcctcccccttataatttaactatgtttacagggaatgcgtacattgtg
gcttcccgagatttcgtccaacatgttttgaagaaccctaaatcccaacaactgattgaa
tgggtaaaagacacttatagcccagatgaacacctctgggccacccttcagcgtgcacgg
tggatgcctggctctgttcccaaccaccccaagtacgacatctcagacatgacttctatt
gccaggctggtcaagtggcagggtcatgagggagacatcgataagggtgctccttatgct
ccctgctctggaatccaccagcgggctatctgcgtttatggggctggggacttgaattgg
atgcttcaaaaccatcacctgttggccaacaagtttgacccaaaggtagatgataatgct
cttcagtgcttagaagaatacctacgttataaggccatctatgggactgaactttga

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_5|54_aa
MEAISKLQAQGKEIETEPGSLAELRKVPPPSATTTLDQSAAINIETRPTSAKRS

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_5|165_bp
atggaggcaatatccaagctgcaggcacagggaaaggaaatagaaacagaacctggcagt
cttgcggagttgaggaaagtgcccccaccttcagcaaccaccacccttgaccagtcagca
gccatcaacattgagacaagacctacatcagcaaaaagatcatga

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_6|374_aa
MPVSSRPLPEDDSIEADILAITGPEDQPGSLEVNGNKVRKKLMAPDISLTLDPSDGSVLS
DDLDESGEIDLDGLDTPSENSNEFEWEDDLPKPKTTEVIRKGSITEYTAAEEKEDGRRWR
MFRIGEQDHRVDMKAIEPYKKVISHGGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLF
KVDQELNGKQDEPKNEQEVPYVTADGNISCMQQENLQAIRKSLRALRSWDLPVTDRCRQG
PAAGTGEGRRGGGDGRVPWREARRSRGAHRTHLGEVFSPPPYFQPGECLKASTSALFCDN
VWTFVLNDVEFREVTELIKVDKVKIVACDGKKLTGQDANPWSHDEVHRSEPFKAEWNLND
DLMTSTSSFSAQEN

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_6|1125_bp
atgcctgtgtcttctagacctttaccagaagatgatagtattgaagcagatatactagct
ataactggaccagaggaccagcctggctcactagaagttaatggaaataaagtgagaaag
aaactaatggctccagacattagcctgacactggatcctagtgatggctctgtattgtca
gatgatttggatgaaagtggggagattgacttagatggcttagacacaccgtcagagaat
agtaatgagtttgagtgggaagatgatcttccaaaacccaagactactgaagtaattagg
aaaggctcaattactgaatacacagcagcagaggaaaaagaagatggacgacgctggcgt
atgttcaggattggagaacaggaccacagggttgatatgaaggcaattgaaccctataaa
aaagttatcagccatgggggatattatggggatggattaaatgccattgttgtgtttgct
gtctgtttcatgcctgaaagtagtcagcctaactatagatacctgatggacaatcttttt
aaagttgatcaagaacttaatggaaaacaagatgaaccgaaaaatgaacaggaagtacca
tatgtgactgctgatggtaacatttcttgtatgcagcaggaaaacctgcaggctatacgc
aagtctctgagggcccttcgctcctgggatctgcccgttaccgaccgttgccggcaaggc
cccgcggccggcaccggagaagggcggcgaggcggcggtgatggtcgcgtcccgtggcgg
gaggctcgtcgttcacggggcgcccacagaacccacctaggggaggtcttcagcccacca
ccgtattttcagccaggtgaatgtcttaaagcatccactagcgccctattctgcgataat
gtgtggacttttgtactgaatgatgttgaattcagagaggtgacagaacttattaaagtg
gataaagtgaaaattgtagcctgtgatggtaaaaaacttactggccaagatgccaaccca
tggtcacatgatgaggttcacagatcagaacctttcaaagctgaatggaacctcaacgat
gatctaatgacttcaacctcctctttcagtgcacaggaaaattaa

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_7|287_aa
MSYSYLICYVNIQKMHKVTKKKALCSVMTKLQWKYPEVLDFTRVKGWGSGGGARFHPEHN
YQKRKSDGVGGQTAKYKQDPSQGRGPKQGGDPGSTSRAGSMAPPTKGRFPVQLRSHRAEF
SQAALTPEEALAPSSSSPLQAGDVGLTARSQKAGPSGARSPRSAVETPAQSPGRSGTASA
AAADPDTDYSTIHWINCVDPTKDLSSGCYMASKRVEEKRMLSVGAKTKLEILVHICINML
SGLGSPSYRRPLHHPEHRLLKYFWPDLGCIPQLQPHPLQGSEQIGLI

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_7|864_bp
atgtcctatagctatcttatctgctacgtcaacattcaaaagatgcacaaagttacaaag
aaaaaagccttatgttccgtaatgacaaaattacaatggaaatatcctgaagtgttagat
ttcacaagggtaaaagggtgggggagcggaggaggggcaaggttccatcccgagcacaac
taccagaaacggaaaagcgacggggtggggggccaaactgccaaatacaaacaggaccca
agccaagggcggggacctaagcagggcggggatccaggaagcacctcccgagcaggttct
atggctccccctaccaagggccggttcccagtccagctccggagccaccgtgccgagttc
tcccaggccgcactcaccccggaggaagccttggccccctcgtcctcttcgcccctccag
gccggcgacgtggggctgacggccaggtcgcaaaaagcagggccgagcggagcccgctcc
cctcggtcggcggtggagaccccggcccaatcccccggccgcagcggtacggcgtcggcg
gcagcagctgacccggacacagactatagtaccattcactggatcaactgtgttgatcct
acaaaggatttaagcagcggttgctacatggcatcaaagagagtggaggagaaaaggatg
ctgtcagttggtgccaaaaccaaactggaaatcctggtgcatatttgcataaatatgctg
tctgggcttggaagcccttcttaccgcagacctcttcatcaccctgaacatcgccttttg
aaatatttctggccagatctagggtgtattccacagctgcagccccatccattgcaaggt
tctgagcagattggcttgatatga

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_8|205_aa
MSERHLPALVLAAKALACDPQLSSLTMRAELTRHFKSCYQLNGSLVKKSTSSFSLSILII
ADGLSIISSWTLPVKYTDKNRTTPGAPFLGNDANCFKLDSGLSRAGERSWASAVEGLSSL
QLSVEADDEASTGIAAVVTLYGDMCLGTNINIFSCFKGFSKGKSPVMMTSLRLEYRFLRE
IFKFCIFTTVAFNKHASGIGGIMKM

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_8|618_bp
atgtcagaaagacacctgccagcacttgtcctggcagctaaggcattggcctgtgaccca
cagctgagctccctgaccatgcgagctgagctgacacggcatttcaagtcctgttaccag
ctcaacggttctcttgtaaaaaaaagcacctcttcatttagcctctccatcttgatcatt
gctgatgggctatcaataatttcaagttggaccttgcctgtgaaatacacagataaaaat
cgtaccacacctggtgccccctttttggggaatgatgcaaattgtttcaaattggacagt
ggactctccagggcaggggaaagatcttgggcaagtgctgtagaaggtctttcttccctg
cagctctctgttgaggctgacgatgaagcaagcactggaattgcagccgttgttacactg
tatggcgatatgtgtttgggtaccaacatcaacattttttcatgctttaaaggtttttct
aaagggaaatcgccagtcatgatgacctcactacgactagaatacaggtttttaagggaa
atttttaaattctgtatttttactactgtggctttcaataaacatgcttctggcataggt
ggcatcatgaaaatgtaa

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_9|51_aa
MPKGKLLWLKQGEGLQLTPIMLKATDHLFLASPTEASICQFPTYRAAKMPA

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_9|156_bp
atgcctaaaggaaagctgctctggctgaagcagggtgaagggctgcagctgacacctatc
atgttgaaggctactgatcatcttttcctagcctcaccaacagaagcatcaatatgccaa
tttccaacctaccgtgcagcaaagatgccggcctga

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_10|202_aa
MSCYVPRRRCRVSVKATKNQHRDLSVCCYHRIPVLTTIAGLIERYSSYLIISQCAPIGPQ
ASEGSECQVDSPGNPTDDTAVEKPGQEAKRLTLQARGEAPSGCICGALLKSAGNWAPQLW
LAQEASLRRPEVALKRCSIHSACHTLADTATLRDIPLKEGQAQPCGRALSHLSLPSPPPT
NLDSERNGSLHPWTVSTCICID

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_10|609_bp
atgtcgtgctatgtgccaaggagaagatgcagagtatcagtgaaagccactaagaaccag
cacagagatctttcagtttgctgctatcacagaatcccagtacttaccacaattgcagga
cttattgaacggtattccagttacctgattattagtcagtgtgcccccataggaccccaa
gcttctgaagggtctgagtgccaagtggactcccctgggaatccaacggatgacacagct
gtagagaagccagggcaggaagcaaagaggctcacgctgcaggccagaggcgaagcccca
tcaggctgcatctgtggagctttgttgaagtctgcagggaactgggcaccacagctgtgg
ctggcacaagaggcaagtctgagaagacctgaagtggcgctcaagaggtgttcaatacac
agtgcatgtcacacgttggcagatacagcaactttaagagacatccctctgaaagaagga
caagctcaaccctgtggcagagctctgtcccacctcagcctccccagcccaccccccacc
aacctcgactcagagcgcaatggctctttgcatccttggacagtttctacttgcatctgc
atcgattaa

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_11|264_aa
MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASD
GLKGRVFEVSLADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM
IEAHVDVKTTDGYLLRLFCVGFTKKRKNQIRKTSYAQHQQVRQIRKKMMEIMIREVQTND
LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK
ATGDETGAKVERADGYEPPVQESV

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_11|795_bp
atggctgttggcaagaacaagcgccttacgaaaggcggcaaaaagggagccaagaagaaa
gtggttgatccattttctaagaaagattggtatgatgtgaaagcacctgctatgttcaat
ataagaaatattggaaagacgctcgtcaccaggacccaaggaaccaaaattgcgtctgat
ggtctcaagggtcgtgtgtttgaagtgagtcttgctgatttgcagaatgatgaagttgca
tttagaaaattcaagctgattactgaagatgttcagggtaaaaactgcctgactaacttc
catggcatggatcttacccgtgacaaaatgtgttccatggtcaaaaaatggcagacaatg
attgaagctcacgttgatgtcaagactaccgatggttacttgcttcgtctgttctgtgtt
ggttttactaaaaaacgcaaaaatcagatacggaagacctcttatgctcagcaccaacag
gtccgccaaatccggaagaagatgatggaaatcatgatccgagaggtgcagacaaatgac
ttgaaagaagtggtcaataaattgattccagacagcattggaaaagacatagaaaaggct
tgccaatctatttatcctctccatgatgtcttcgttagaaaagtaaaaatgctgaagaag
cccaagtttgaattgggaaagctcatggagcttcatggtgaaggcagtagttctggaaaa
gccactggggacgagacaggtgctaaagttgaacgagctgatggatatgaaccaccagtc
caagaatctgtttaa

>gi568815583r:59564072_59782457|GENSCAN_predicted_peptide_12|95_aa
XIQTTIREYYKRLYANKLENLEEMDKFLDTETLPRLNQEEVESLNRPITGSEIEAIINSL
PTKKSPGPDGFTAKFYQRTGGDDLPASVPVQGLGP

>gi568815583r:59564072_59782457|GENSCAN_predicted_CDS_12|288_bp
naaatacaaactaccatcagagaatactataaacgcctctatgcaaataaactagaaaat
ctagaagaaatggataaattcctagacacagagaccctcccaagactaaaccaggaagaa
gttgaatctctgaatagaccaataacaggctctgaaattgaggcaataattaatagctta
ccaaccaaaaaaagtccaggaccagatggattcacagccaaattctaccagagaacaggt
ggagatgatcttccggcatcagtcccagtccaaggtttgggcccctga